UHGV-0029411 (vOTU-091942)

Viral Genome: UHGV-0029411

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0029411
vOTU ID	vOTU-091942
Representative Genome?	Yes
Source	Hadza
Original genome ID	Hadza_MoBio_hadza-I-L_G_7_2399__NODE_3686_length_22684_cov_7.493652
Associated BioSample	SAMEA4766273
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	59.45 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	13
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.979
Virus hallmark genes (geNomad)	8
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	20.63
Jumbo phage	No

Genome content
Genome length (bp)	22,684
GC content	58.63%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	36
CDS density	90%
Average CDS length (bps)	569.75
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 59.45)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0029411_1	phrog_6616	67.3	4.4e-21	tail protein	tail
eggNOG-mapper	UHGV-0029411_1	1232453.BAIF02000058_gene1641	113.0	2.84e-23	Phage minor structural protein	N/A
COG	UHGV-0029411_1	COG4926	N/A	N/A	Phage-related protein	N/A
PHROG	UHGV-0029411_2	phrog_1194	55.6	5.3e-16	N/A	unknown function
eggNOG-mapper	UHGV-0029411_2	33035.JPJF01000093_gene2242	92.8	7.01e-23	N/A	N/A
structural_annotation	UHGV-0029411_2	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0029411_3	phrog_1535	388.1	0	tail length tape measure protein	tail
UniRef90	UHGV-0029411_3	UniRef90_A0A174WQ97	471.0	0	Phage-like protein	N/A
eggNOG-mapper	UHGV-0029411_3	33035.JPJF01000093_gene2243	511.0	0	phage tail tape measure protein	N/A
COG	UHGV-0029411_3	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-0029411_3	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0029411_4	phrog_8355	93.2	1.1e-27	N/A	unknown function
UniRef90	UHGV-0029411_4	UniRef90_UPI001ADD7ADE	85.1	1.17e-19	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-0029411_4	33035.JPJF01000093_gene2244	83.2	4.77e-20	N/A	N/A
PHROG	UHGV-0029411_5	phrog_8300	83.1	2.6e-24	N/A	unknown function
eggNOG-mapper	UHGV-0029411_5	33035.JPJF01000093_gene2245	97.8	3.07e-25	N/A	N/A
structural_annotation	UHGV-0029411_5	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0029411_6	phrog_820	120.7	6.6e-36	major tail protein	tail
eggNOG-mapper	UHGV-0029411_6	33035.JPJF01000093_gene2246	196.0	0	N/A	N/A
structural_annotation	UHGV-0029411_6	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0029411_7	phrog_2595	66.1	4.9e-19	head-tail connector protein	connector
UniRef90	UHGV-0029411_7	UniRef90_UPI001D0627B3	124.0	3.31e-34	minor capsid protein	N/A
eggNOG-mapper	UHGV-0029411_7	33035.JPJF01000093_gene2247	128.0	1.63e-36	N/A	N/A
structural_annotation	UHGV-0029411_7	PF12691,COG5003	N/A	N/A	N/A	N/A
PHROG	UHGV-0029411_8	phrog_556	61.7	1.1e-17	minor head protein	head and packaging
eggNOG-mapper	UHGV-0029411_8	742740.HMPREF9474_03509	139.0	5.96e-41	N/A	N/A
PHROG	UHGV-0029411_9	phrog_8710	119.7	1.1e-35	N/A	unknown function
eggNOG-mapper	UHGV-0029411_9	742740.HMPREF9474_03508	114.0	1.81e-31	N/A	N/A
structural_annotation	UHGV-0029411_9	PF10665,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0029411_10	phrog_541	54.2	0.0000000000000025	head-tail adaptor	connector
eggNOG-mapper	UHGV-0029411_10	1298920.KI911353_gene4848	84.0	4.17e-19	N/A	N/A
PHROG	UHGV-0029411_11	phrog_422	218.4	0	major head protein	head and packaging
eggNOG-mapper	UHGV-0029411_11	679192.HMPREF9013_1301	310.0	0	N/A	N/A
structural_annotation	UHGV-0029411_11	PF21703,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
PHROG	UHGV-0029411_12	phrog_2303	68.1	1.4e-19	head scaffolding protein	head and packaging
eggNOG-mapper	UHGV-0029411_12	552396.HMPREF0863_01634	80.5	5.05e-16	N/A	N/A
PHROG	UHGV-0029411_14	phrog_581	231.8	0	minor head protein	head and packaging
UniRef90	UHGV-0029411_14	UniRef90_A0A413WRQ0	518.0	0	Minor capsid protein	N/A
eggNOG-mapper	UHGV-0029411_14	33035.JPJF01000093_gene2255	394.0	0	N/A	N/A
Pfam	UHGV-0029411_14	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0029411_14	COG5585	N/A	N/A	Putative phage head morphogenesis protein, F of phage Mu or gp7 of SPP1	N/A
structural_annotation	UHGV-0029411_14	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-0029411_15	phrog_25639	95.8	2e-28	N/A	unknown function
eggNOG-mapper	UHGV-0029411_15	483218.BACPEC_01160	79.0	1.31e-18	N/A	N/A
PHROG	UHGV-0029411_16	phrog_533	228.0	0	portal protein	head and packaging
UniRef90	UHGV-0029411_16	UniRef90_A0A1C6GX09	509.0	0	Phage portal protein, putative, A118 family	N/A
eggNOG-mapper	UHGV-0029411_16	1282664.H354_06626	440.0	0	N/A	N/A
structural_annotation	UHGV-0029411_16	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0029411_17	K06909	90.7	2.1e-26	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0029411_17	phrog_2	90.1	3.9e-26	terminase large subunit	head and packaging
UniRef90	UHGV-0029411_17	UniRef90_R6QSC6	651.0	0	Phage terminase large subunit PBSX family	N/A
eggNOG-mapper	UHGV-0029411_17	1282664.H354_06621	570.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-0029411_17	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-0029411_17	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0029411_17	PF03237,PF17289,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
KOfam	UHGV-0029411_18	K07474	81.1	2.4e-23	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-0029411_18	phrog_51	70.8	2.2e-20	terminase small subunit	head and packaging
UniRef90	UHGV-0029411_18	UniRef90_A0A374HNN6	158.0	0	Terminase small subunit	N/A
eggNOG-mapper	UHGV-0029411_18	1160721.RBI_II00483	107.0	5.48e-28	DNA packaging	N/A
Pfam	UHGV-0029411_18	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-0029411_18	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0029411_18	PF03592,COG3728	N/A	N/A	N/A	N/A
PHROG	UHGV-0029411_19	phrog_36	82.9	4e-24	transcriptional regulator	transcription regulation
UniRef90	UHGV-0029411_19	UniRef90_A0A6A8VJ07	112.0	3.54e-29	N/A	N/A
eggNOG-mapper	UHGV-0029411_19	903814.ELI_1292	71.6	0.0000000000000463	N/A	N/A
Pfam	UHGV-0029411_19	PF04545	N/A	N/A	Sigma-70, region 4	Sigma70_r4
structural_annotation	UHGV-0029411_19	PF07374,MF_00674,NF007227,COG1342	N/A	N/A	N/A	N/A
PHROG	UHGV-0029411_23	phrog_3584	155.2	0	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0029411_23	UniRef90_A0A1I5LZL1	145.0	3.35e-39	Relaxase/Mobilisation nuclease domain-containing protein	N/A
eggNOG-mapper	UHGV-0029411_23	397290.C810_00404	174.0	0	N/A	N/A
structural_annotation	UHGV-0029411_23	PF21578	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0029411_31	PF07878,COG3609	N/A	N/A	N/A	N/A
PHROG	UHGV-0029411_32	phrog_353	76.2	2.5e-22	toxin	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0029411_32	UniRef90_A0A1I3T1Z8	97.1	2.26e-25	Predicted RNA binding protein YcfA, dsRBD-like fold, HicA-like mRNA interferase family	N/A
eggNOG-mapper	UHGV-0029411_32	1408311.JNJM01000002_gene1308	94.7	3.12e-25	HicA toxin of bacterial toxin-antitoxin,	N/A
Pfam	UHGV-0029411_32	PF07927	N/A	N/A	HicA toxin of bacterial toxin-antitoxin,	HicA_toxin
COG	UHGV-0029411_32	COG1724	N/A	N/A	Predicted RNA binding protein YcfA, dsRBD-like fold, HicA-like mRNA interferase family	N/A
structural_annotation	UHGV-0029411_32	PF07927,COG1724	N/A	N/A	N/A	N/A
KOfam	UHGV-0029411_33	K18843	62.4	1e-17	hicB; antitoxin HicB	N/A
PHROG	UHGV-0029411_33	phrog_497	82.0	9.4e-24	toxin-antitoxin system HicB-like	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0029411_33	UniRef90_A0A0S2W5Q3	206.0	0	N/A	N/A
eggNOG-mapper	UHGV-0029411_33	397290.C810_04356	183.0	0	HicB_like antitoxin of bacterial toxin-antitoxin system	N/A
Pfam	UHGV-0029411_33	PF15919	N/A	N/A	HicB_like antitoxin of bacterial toxin-antitoxin system	HicB_lk_antitox
COG	UHGV-0029411_33	COG1598	N/A	N/A	Antitoxin component HicB of the HicAB toxin-antitoxin system	N/A
structural_annotation	UHGV-0029411_33	PF15919,COG1598	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0029411_34	445972.ANACOL_01808	49.7	0.00000108	N/A	N/A
UniRef90	UHGV-0029411_35	UniRef90_UPI001A9C255F	92.8	2.12e-23	N/A	N/A
eggNOG-mapper	UHGV-0029411_35	1121335.Clst_0370	80.1	3.72e-19	N/A	N/A
Pfam	UHGV-0029411_35	PF02954	N/A	N/A	Bacterial regulatory protein, Fis family	HTH_8
structural_annotation	UHGV-0029411_35	PF05339,NF041951,COG3655	N/A	N/A	N/A	N/A
KOfam	UHGV-0029411_36	K01356	151.4	1.4013e-45	lexA; repressor LexA [EC:3.4.21.88]	N/A
PHROG	UHGV-0029411_36	phrog_4	125.9	0	transcriptional repressor	transcription regulation
UniRef90	UHGV-0029411_36	UniRef90_A0A1Y4H987	213.0	0	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0029411_36	1121423.JONT01000002_gene2372	178.0	0	Peptidase S24-like	N/A
Pfam	UHGV-0029411_36	PF13560	N/A	N/A	Helix-turn-helix domain	HTH_31
Pfam	UHGV-0029411_36	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
Pfam	UHGV-0029411_36	PF00717	N/A	N/A	Peptidase S24-like	Peptidase_S24
COG	UHGV-0029411_36	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-0029411_36	PF00717,PF01381,MF_00015,TIGR00498,NF007257,COG1974,COG1396	N/A	N/A	N/A	N/A