UHGV-0030469 (vOTU-070110)

Viral Genome: UHGV-0030469

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0030469
vOTU ID	vOTU-070110
Representative Genome?	Yes
Source	Hadza
Original genome ID	Hadza_MoBio_hadza-I-L_K_14_2624__NODE_7813_length_16181_cov_21.448460
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	ITR
CheckV completeness	99.9 (High-quality)
Trimmed provirus	No
CheckV viral markers	8
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9773
Virus hallmark genes (geNomad)	4
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	29.71
Jumbo phage	No

Genome content
Genome length (bp)	16,181
GC content	40.55%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	24
CDS density	94%
Average CDS length (bps)	632.25
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 99.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0030469_4	K07273	124.5	1e-36	acm; lysozyme	N/A
PHROG	UHGV-0030469_4	phrog_291	120.0	2.4e-35	endolysin	lysis
UniRef90	UHGV-0030469_4	UniRef90_R5MT05	461.0	0	Glycosyl hydrolase family 25/peptidoglycan binding domain protein	N/A
eggNOG-mapper	UHGV-0030469_4	697329.Rumal_2219	70.9	0.0000000000436	hydrolase, family 25	N/A
Pfam	UHGV-0030469_4	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-0030469_4	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-0030469_4	PF01183,COG3757	N/A	N/A	N/A	N/A
PHROG	UHGV-0030469_5	phrog_1863	58.1	9.4e-17	N/A	unknown function
PHROG	UHGV-0030469_6	phrog_1129	60.4	2.3e-17	holin	lysis
eggNOG-mapper	UHGV-0030469_6	693746.OBV_13280	51.2	0.000000292	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-0030469_6	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0030469_6	PF06946	N/A	N/A	N/A	N/A
PHROG	UHGV-0030469_7	phrog_11037	141.7	6.00036e-42	N/A	unknown function
UniRef90	UHGV-0030469_7	UniRef90_R5N5I4	454.0	0	Morphogenesis protein	N/A
eggNOG-mapper	UHGV-0030469_7	10753.B7SSN4_BPNF	159.0	8.54792e-44	N/A	N/A
Pfam	UHGV-0030469_7	PF18013	N/A	N/A	Phage tail lysozyme	Phage_lysozyme2
structural_annotation	UHGV-0030469_7	PF18013	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0030469_8	PF01105,NF038127,COG4935	N/A	N/A	N/A	N/A
PHROG	UHGV-0030469_11	phrog_3225	164.8	0	adaptor Ad4	connector
UniRef90	UHGV-0030469_11	UniRef90_R5N6P4	416.0	0	Lower collar	N/A
PHROG	UHGV-0030469_12	phrog_2038	243.4	0	upper collar connector	connector
UniRef90	UHGV-0030469_12	UniRef90_R5N5I0	622.0	0	Connector protein	N/A
eggNOG-mapper	UHGV-0030469_12	10753.B7SSN1_BPNF	120.0	8.34e-29	Phage Connector (GP10)	N/A
Pfam	UHGV-0030469_12	PF05352	N/A	N/A	Phage Connector (GP10)	Phage_connector
structural_annotation	UHGV-0030469_12	PF05352,MF_04120,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-0030469_13	phrog_2248	452.1	0	tail protein	tail
UniRef90	UHGV-0030469_13	UniRef90_R5MM56	1070.0	0	Tail protein	N/A
eggNOG-mapper	UHGV-0030469_13	10756.DIT9_BPPH2	105.0	6.53e-21	N/A	N/A
Pfam	UHGV-0030469_13	PF16838	N/A	N/A	Caudoviral major tail protein N-terminus	Caud_tail_N
Pfam	UHGV-0030469_13	PF20934	N/A	N/A	Bacillus phage phi29, Tail knob protein gp9, C-terminal domain	phi29_gp9_C
structural_annotation	UHGV-0030469_13	PF20934,PF16838	N/A	N/A	N/A	N/A
PHROG	UHGV-0030469_14	phrog_2006	326.9	0	major head protein	head and packaging
UniRef90	UHGV-0030469_14	UniRef90_R5MSZ3	771.0	0	Major head protein	N/A
eggNOG-mapper	UHGV-0030469_14	12345.CAPSD_BPGA1	151.0	3.24e-38	T=13 icosahedral viral capsid	N/A
structural_annotation	UHGV-0030469_14	PF19821,PF02368,MF_04119,NF033394,COG1659	N/A	N/A	N/A	N/A
UniRef90	UHGV-0030469_15	UniRef90_R5MMY2	118.0	2.53e-33	AXH domain-containing protein	N/A
PHROG	UHGV-0030469_16	phrog_2150	297.8	0	terminase	head and packaging
UniRef90	UHGV-0030469_16	UniRef90_R5N6N9	707.0	0	DNA encapsidation protein	N/A
eggNOG-mapper	UHGV-0030469_16	10756.PKG16_BPPH2	97.4	4.43e-20	Podovirus DNA encapsidation protein (Gp16)	N/A
Pfam	UHGV-0030469_16	PF05894	N/A	N/A	Podovirus DNA encapsidation protein (Gp16)	Podovirus_Gp16
structural_annotation	UHGV-0030469_16	PF05894,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
Pfam	UHGV-0030469_17	PF17427	N/A	N/A	Phage Single-stranded DNA-binding protein	Phi29_Phage_SSB
structural_annotation	UHGV-0030469_17	PF17427	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0030469_18	PF17548,MF_00273	N/A	N/A	N/A	N/A
KOfam	UHGV-0030469_19	K21237	450.3	0	gp2; Podoviridae DNA polymerase [EC:2.7.7.7]	N/A
PHROG	UHGV-0030469_19	phrog_1907	498.0	0	DNA polymerase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0030469_19	UniRef90_R5N5H3	1221.0	0	DNA-directed DNA polymerase	N/A
eggNOG-mapper	UHGV-0030469_19	10753.DPOL_BPNF	323.0	0	nucleotide binding	N/A
Pfam	UHGV-0030469_19	PF03175	N/A	N/A	DNA polymerase type B, organellar and viral	DNA_pol_B_2
structural_annotation	UHGV-0030469_19	PF03175,MF_04055,NF004415,COG0417	N/A	N/A	N/A	N/A