Viral Genome: UHGV-0030866


Overview
UHGV ID UHGV-0030866
vOTU ID vOTU-060760
Representative Genome? Yes
Source Hadza
Original genome ID Hadza_PheChl_Fiber-Hadza-Nepal_A_18_1651__NODE_991_length_57357_cov_4.890677
Associated BioSample SAMEA4765932
Viral genome confidence Confident

Quality assessment
CheckV method AAI-based
CheckV completeness 99.9 (High-quality)
Trimmed provirus No
CheckV viral markers 16
CheckV host markers 2
Recoded stop codon No
Viral Content
geNomad score 0.9796
Virus hallmark genes (geNomad) 11
Plasmid hallmark genes (geNomad) 0
viralVerify prediction Virus
viralVerify score 17.91
Jumbo phage No

Genome content
Genome length (bp) 57,357
GC content 38.82%
Genetic code The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes 93
CDS density 89%
Average CDS length (bps) 551.19
Total tRNA genes 2
Suppressor tRNA genes 0



Genome content

Select to view:   Genome Viewer   Functional Annotation

Genome View (Completeness: 99.9)
x
This website uses cookies to improve user experience. By using this service you consent to all cookies in accordance with our privacy policy. OK