UHGV-0031011 (vOTU-121349)

Viral Genome: UHGV-0031011

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0031011
vOTU ID	vOTU-121349
Representative Genome?	Yes
Source	Hadza
Original genome ID	Hadza_MoBio_hadza-I-L_J_9_1249__NODE_2723_length_27120_cov_28.300189
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	82.51 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	21
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9816
Virus hallmark genes (geNomad)	10
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	38.82
Jumbo phage	No

Genome content
Genome length (bp)	27,120
GC content	50.40%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	47
CDS density	97%
Average CDS length (bps)	558.00
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 82.51)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0031011_1	phrog_27197	115.0	4.2e-40	N/A	unknown function
COG	UHGV-0031011_1	COG5164	N/A	N/A	Transcription elongation factor SPT5	N/A
structural_annotation	UHGV-0031011_1	NF007410	N/A	N/A	N/A	N/A
PHROG	UHGV-0031011_3	phrog_659	202.7	0	Sak-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0031011_3	UniRef90_UPI001E5A6693	344.0	0	N/A	N/A
eggNOG-mapper	UHGV-0031011_3	1507.HMPREF0262_00431	223.0	0	N/A	N/A
Pfam	UHGV-0031011_3	PF06378	N/A	N/A	N/A	DUF1071
structural_annotation	UHGV-0031011_3	PF06378,COG4712	N/A	N/A	N/A	N/A
PHROG	UHGV-0031011_4	phrog_1389	65.7	6.6e-19	N/A	unknown function
eggNOG-mapper	UHGV-0031011_4	883156.HMPREF9282_01223	67.4	0.000000000000573	N/A	N/A
structural_annotation	UHGV-0031011_4	PF11056,TIGR04376,COG1842	N/A	N/A	N/A	N/A
PHROG	UHGV-0031011_5	phrog_7566	51.8	0.000000000000012	N/A	unknown function
eggNOG-mapper	UHGV-0031011_5	693746.OBV_24070	69.7	0.0000000000000683	N/A	N/A
KOfam	UHGV-0031011_6	K03111	132.3	5.7e-39	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0031011_6	phrog_44	136.9	1.3e-40	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0031011_6	UniRef90_UPI001E2A5A6F	213.0	0	single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0031011_6	1007096.BAGW01000023_gene151	128.0	2.09e-36	Single-strand binding protein family	N/A
Pfam	UHGV-0031011_6	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0031011_6	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0031011_6	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0031011_6	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0031011_6	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0031011_8	phrog_9474	92.3	6.1e-27	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0031011_8	UniRef90_A0A8B3R1H0	103.0	4.8e-23	Phage replication protein	N/A
eggNOG-mapper	UHGV-0031011_8	203119.Cthe_2466	127.0	5.14e-32	N/A	N/A
structural_annotation	UHGV-0031011_8	PF01475,NF006999,COG0735	N/A	N/A	N/A	N/A
PHROG	UHGV-0031011_9	phrog_9804	169.9	0	N/A	unknown function
UniRef90	UHGV-0031011_9	UniRef90_UPI001E312ACC	303.0	0	replicative helicase loader/inhibitor	N/A
eggNOG-mapper	UHGV-0031011_9	1121344.JHZO01000003_gene981	179.0	0	Loader and inhibitor of phage G40P	N/A
Pfam	UHGV-0031011_9	PF11417	N/A	N/A	Loader and inhibitor of phage G40P	Inhibitor_G39P
structural_annotation	UHGV-0031011_9	PF11417	N/A	N/A	N/A	N/A
PHROG	UHGV-0031011_10	phrog_954	193.9	0	DNA methyltransferase	other
UniRef90	UHGV-0031011_10	UniRef90_UPI00195B0EE7	268.0	0	methyltransferase domain-containing protein	N/A
eggNOG-mapper	UHGV-0031011_10	411461.DORFOR_01143	230.0	0	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA	N/A
PADLOC	UHGV-0031011_10	MTase_II_00074	192.4	0	Type II methyltransferase	RM
Pfam	UHGV-0031011_10	PF08241	N/A	N/A	Methyltransferase domain	Methyltransf_11
COG	UHGV-0031011_10	COG1092	N/A	N/A	23S rRNA G2069 N7-methylase RlmK or C1962 C5-methylase RlmI	N/A
structural_annotation	UHGV-0031011_10	PF05148,MF_03044,NF033398,COG1041	N/A	N/A	N/A	N/A
KOfam	UHGV-0031011_11	K01160	69.5	8.2e-20	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-0031011_11	phrog_34	72.6	6.5e-21	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0031011_11	UniRef90_A0A498CNH4	151.0	2.8026e-45	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-0031011_11	477974.Daud_0813	52.0	0.00000183	N/A	N/A
Pfam	UHGV-0031011_11	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
structural_annotation	UHGV-0031011_11	PF19595,NF007305,COG4570	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0031011_13	TIGR04381	N/A	N/A	N/A	N/A
PHROG	UHGV-0031011_16	phrog_3777	80.7	1.1e-23	N/A	unknown function
UniRef90	UHGV-0031011_16	UniRef90_A0A417F883	147.0	4.80645e-43	N/A	N/A
eggNOG-mapper	UHGV-0031011_16	411462.DORLON_00813	68.2	0.000000000000697	N/A	N/A
Pfam	UHGV-0031011_16	PF12957	N/A	N/A	N/A	DUF3846
structural_annotation	UHGV-0031011_16	PF12957	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0031011_19	657322.FPR_23450	147.0	9.80909e-45	N/A	N/A
PHROG	UHGV-0031011_20	phrog_36	47.5	0.00000000000032	transcriptional regulator	transcription regulation
eggNOG-mapper	UHGV-0031011_20	428125.CLOLEP_01806	76.6	0.00000000000000114	N/A	N/A
Pfam	UHGV-0031011_20	PF07374	N/A	N/A	N/A	DUF1492
structural_annotation	UHGV-0031011_20	PF07374,TIGR01636	N/A	N/A	N/A	N/A
PHROG	UHGV-0031011_23	phrog_7339	102.7	3.2e-30	DNA repair exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0031011_23	UniRef90_A0A2V2GLL9	433.0	0	Metallophos_2 domain-containing protein	N/A
eggNOG-mapper	UHGV-0031011_23	1150474.JQJI01000006_gene784	93.2	9.78e-20	metallophosphoesterase	N/A
Pfam	UHGV-0031011_23	PF00149	N/A	N/A	Calcineurin-like phosphoesterase	Metallophos
COG	UHGV-0031011_23	COG1408	N/A	N/A	Predicted phosphohydrolase, MPP superfamily	N/A
structural_annotation	UHGV-0031011_23	PF12850,MF_00325,NF003118,COG1311	N/A	N/A	N/A	N/A
PHROG	UHGV-0031011_24	phrog_361	70.4	2.8e-20	terminase small subunit	head and packaging
UniRef90	UHGV-0031011_24	UniRef90_A0A1C6H6I9	161.0	0	Phage terminase, small subunit	N/A
Pfam	UHGV-0031011_24	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
COG	UHGV-0031011_24	COG3747	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0031011_24	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
PHROG	UHGV-0031011_25	phrog_9	294.0	0	terminase large subunit	head and packaging
UniRef90	UHGV-0031011_25	UniRef90_A0A2V2GQ67	1147.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0031011_25	1226322.HMPREF1545_00113	871.0	0	Phage Terminase	N/A
Pfam	UHGV-0031011_25	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0031011_25	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0031011_25	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0031011_25	PF20441,PF03354,MF_04013,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0031011_26	phrog_12	180.1	0	portal protein	head and packaging
UniRef90	UHGV-0031011_26	UniRef90_A0A2V2GQD5	714.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0031011_26	1226322.HMPREF1545_00114	503.0	0	Phage portal protein, HK97 family	N/A
Pfam	UHGV-0031011_26	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-0031011_26	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-0031011_26	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0031011_26	PF04860,MF_04120,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-0031011_27	K06904	147.2	1.30321e-43	N/A	N/A
PHROG	UHGV-0031011_27	phrog_80	167.5	0	head maturation protease	head and packaging
UniRef90	UHGV-0031011_27	UniRef90_A0A2V2GNJ3	356.0	0	HK97 family phage prohead protease	N/A
eggNOG-mapper	UHGV-0031011_27	1226322.HMPREF1545_00115	233.0	0	Phage prohead protease, HK97 family	N/A
Pfam	UHGV-0031011_27	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
NCBIFam	UHGV-0031011_27	TIGR01543.1	N/A	N/A	HK97 family phage prohead protease	N/A
COG	UHGV-0031011_27	COG3740	N/A	N/A	Phage head maturation protease	N/A
structural_annotation	UHGV-0031011_27	PF04586,TIGR01543,COG3740	N/A	N/A	N/A	N/A
PHROG	UHGV-0031011_28	phrog_10	223.0	0	major head protein	head and packaging
UniRef90	UHGV-0031011_28	UniRef90_A0A2V2GRA2	960.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-0031011_28	1226322.HMPREF1545_00116	585.0	0	phage major capsid protein, HK97 family	N/A
Pfam	UHGV-0031011_28	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
Pfam	UHGV-0031011_28	PF12733	N/A	N/A	Cadherin-like beta sandwich domain	Cadherin-like
NCBIFam	UHGV-0031011_28	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0031011_28	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0031011_28	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0031011_29	phrog_2550	85.0	4e-25	N/A	unknown function
UniRef90	UHGV-0031011_29	UniRef90_UPI001E35E63D	70.1	0.0000000000000829	phage head-tail connector protein	N/A
eggNOG-mapper	UHGV-0031011_29	1226322.HMPREF1545_00117	107.0	1.99e-29	N/A	N/A
structural_annotation	UHGV-0031011_29	PF05135,TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-0031011_30	phrog_1951	93.2	1.8e-27	head-tail adaptor	connector
UniRef90	UHGV-0031011_30	UniRef90_A0A2V2GSS5	176.0	0	Phage head-tail adapter protein	N/A
eggNOG-mapper	UHGV-0031011_30	1226322.HMPREF1545_00118	105.0	3.22e-28	N/A	N/A
NCBIFam	UHGV-0031011_30	TIGR01563.1	N/A	N/A	phage head closure protein	N/A
structural_annotation	UHGV-0031011_30	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0031011_31	phrog_5	44.6	0.0000000000038	tail completion or Neck1 protein	connector
UniRef90	UHGV-0031011_31	UniRef90_UPI00073E355A	155.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0031011_31	665956.HMPREF1032_02261	90.5	1.28e-21	N/A	N/A
Pfam	UHGV-0031011_31	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-0031011_31	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-0031011_32	phrog_78	42.3	0.000000000014	tail terminator	connector
UniRef90	UHGV-0031011_32	UniRef90_U2SBX3	105.0	1.71e-27	HTH merR-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0031011_32	1226322.HMPREF1545_00120	105.0	2.87e-28	N/A	N/A
structural_annotation	UHGV-0031011_32	PF20765	N/A	N/A	N/A	N/A
PHROG	UHGV-0031011_33	phrog_88	171.2	0	major tail protein	tail
UniRef90	UHGV-0031011_33	UniRef90_A0A2V2GLL2	368.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-0031011_33	1226322.HMPREF1545_00121	191.0	0	phage major tail protein, phi13 family	N/A
NCBIFam	UHGV-0031011_33	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-0031011_33	PF06488,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-0031011_34	phrog_709	95.8	2.8e-28	N/A	unknown function
eggNOG-mapper	UHGV-0031011_34	411471.SUBVAR_05858	125.0	1.69e-35	N/A	N/A
structural_annotation	UHGV-0031011_34	PF19591	N/A	N/A	N/A	N/A
PHROG	UHGV-0031011_35	phrog_13339	412.1	0	tail length tape measure protein	tail
UniRef90	UHGV-0031011_35	UniRef90_A0A2V2GLB5	1120.0	0	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-0031011_35	1033743.CAES01000020_gene3130	320.0	0	Phage-related minor tail protein	N/A
Pfam	UHGV-0031011_35	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
NCBIFam	UHGV-0031011_35	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
COG	UHGV-0031011_35	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
structural_annotation	UHGV-0031011_35	PF10145,TIGR01760,COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-0031011_36	phrog_20385	83.8	1e-24	minor tail protein	tail
UniRef90	UHGV-0031011_36	UniRef90_UPI001C013719	154.0	5.28009e-42	phage baseplate protein	N/A
eggNOG-mapper	UHGV-0031011_36	411471.SUBVAR_05861	189.0	0	N/A	N/A
structural_annotation	UHGV-0031011_36	PF16774,PF20753,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0031011_37	phrog_7064	153.3	0	tail protein	tail
eggNOG-mapper	UHGV-0031011_37	665956.HMPREF1032_00106	261.0	0	N/A	N/A
structural_annotation	UHGV-0031011_37	PF14594,TIGR03361,COG4379	N/A	N/A	N/A	N/A
PHROG	UHGV-0031011_38	phrog_5811	80.0	2.7e-23	N/A	unknown function
eggNOG-mapper	UHGV-0031011_38	665956.HMPREF1032_00105	128.0	7.7e-33	N/A	N/A
structural_annotation	UHGV-0031011_38	PF20747,TIGR03353	N/A	N/A	N/A	N/A
KOfam	UHGV-0031011_39	K13956	71.1	4.1e-21	IPP, KLHL27; actin-binding protein IPP	N/A
PHROG	UHGV-0031011_39	phrog_12615	51.1	8.8e-19	N/A	unknown function
Pfam	UHGV-0031011_39	PF01344	N/A	N/A	Kelch motif	Kelch_1
Pfam	UHGV-0031011_39	PF13418	N/A	N/A	Galactose oxidase, central domain	Kelch_4
structural_annotation	UHGV-0031011_39	PF16472,MF_01195,TIGR03548,COG3055	N/A	N/A	N/A	N/A
PHROG	UHGV-0031011_40	phrog_2295	89.1	4.2e-26	N/A	unknown function
Pfam	UHGV-0031011_40	PF21722	N/A	N/A	Glycine-rich domain	Gly_rich_2
structural_annotation	UHGV-0031011_40	PF21722	N/A	N/A	N/A	N/A
PHROG	UHGV-0031011_43	phrog_2310	55.8	4.7e-16	N/A	unknown function
eggNOG-mapper	UHGV-0031011_43	1415774.U728_3409	55.5	0.000000000808	N/A	N/A
PHROG	UHGV-0031011_44	phrog_1863	61.4	8.8e-18	N/A	unknown function
eggNOG-mapper	UHGV-0031011_44	718252.FP2_04900	75.1	9.66e-17	N/A	N/A
KOfam	UHGV-0031011_46	K01447	84.6	1.7e-24	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0031011_46	phrog_15001	209.7	0	endolysin	lysis
UniRef90	UHGV-0031011_46	UniRef90_A0A8D9UHF0	480.0	0	PGRP protein	N/A
eggNOG-mapper	UHGV-0031011_46	411483.FAEPRAA2165_03397	204.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-0031011_46	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
COG	UHGV-0031011_46	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0031011_46	PF01510,NF008758,COG5632	N/A	N/A	N/A	N/A