UHGV-0031949 (vOTU-116182)

Viral Genome: UHGV-0031949

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0031949
vOTU ID	vOTU-116182
Representative Genome?	Yes
Source	Hadza
Original genome ID	Hadza_MoBio_hadza-I-L_M_10_2632__NODE_3565_length_25636_cov_42.517078
Associated BioSample	SAMEA4766378
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	50.14 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	22
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9701
Virus hallmark genes (geNomad)	13
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	46.42
Jumbo phage	No

Genome content
Genome length (bp)	25,636
GC content	38.77%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	36
CDS density	96%
Average CDS length (bps)	682.00
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 50.14)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0031949_1	phrog_1272	577.2	0	tail length tape measure protein	tail
UniRef90	UHGV-0031949_1	UniRef90_A0A374VRY0	919.0	0	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-0031949_1	411473.RUMCAL_03183	836.0	0	Phage tail tape measure protein, TP901 family	N/A
Pfam	UHGV-0031949_1	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
NCBIFam	UHGV-0031949_1	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
COG	UHGV-0031949_1	COG5283	N/A	N/A	Phage-related tail protein	N/A
structural_annotation	UHGV-0031949_1	PF10145,MF_04138,TIGR01760,COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-0031949_2	phrog_2194	102.9	1.5e-30	N/A	unknown function
UniRef90	UHGV-0031949_2	UniRef90_U2KEC4	124.0	1.86e-35	Prevent-host-death family protein	N/A
eggNOG-mapper	UHGV-0031949_2	411473.RUMCAL_02819	124.0	3.12e-36	Antitoxin component of a toxin-antitoxin (TA) module	N/A
structural_annotation	UHGV-0031949_2	PF02604,TIGR01552,COG2161	N/A	N/A	N/A	N/A
KOfam	UHGV-0031949_3	K07341	154.1	1.4013e-45	doc; death on curing protein	N/A
PHROG	UHGV-0031949_3	phrog_577	136.8	6.50006e-41	Doc-like toxin	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0031949_3	UniRef90_U2JWE6	184.0	0	Death-on-curing family protein	N/A
eggNOG-mapper	UHGV-0031949_3	411473.RUMCAL_02818	184.0	0	Fic/DOC family	N/A
Pfam	UHGV-0031949_3	PF02661	N/A	N/A	Fic/DOC family	Fic
NCBIFam	UHGV-0031949_3	TIGR01550.1	N/A	N/A	type II toxin-antitoxin system death-on-curing family toxin	N/A
COG	UHGV-0031949_3	COG3654	N/A	N/A	Prophage maintenance system killer protein	N/A
structural_annotation	UHGV-0031949_3	PF02661,TIGR01550,COG3654	N/A	N/A	N/A	N/A
PHROG	UHGV-0031949_4	phrog_3033	80.9	1e-23	N/A	unknown function
UniRef90	UHGV-0031949_4	UniRef90_A0A2X2UJ60	82.8	7e-20	Phage-like protein	N/A
eggNOG-mapper	UHGV-0031949_4	411473.RUMCAL_03186	107.0	1.43e-30	N/A	N/A
PHROG	UHGV-0031949_5	phrog_709	116.2	1.7e-34	N/A	unknown function
eggNOG-mapper	UHGV-0031949_5	411473.RUMCAL_03187	221.0	0	N/A	N/A
structural_annotation	UHGV-0031949_5	PF11836	N/A	N/A	N/A	N/A
PHROG	UHGV-0031949_6	phrog_88	170.9	0	major tail protein	tail
UniRef90	UHGV-0031949_6	UniRef90_U2LLX5	321.0	0	Phage major tail protein, phi13 family	N/A
eggNOG-mapper	UHGV-0031949_6	411473.RUMCAL_03188	321.0	0	phage major tail protein, phi13 family	N/A
NCBIFam	UHGV-0031949_6	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-0031949_6	PF06488,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-0031949_7	phrog_78	45.9	0.00000000000094	tail terminator	connector
UniRef90	UHGV-0031949_7	UniRef90_UPI0005C7AE81	138.0	1.73e-40	N/A	N/A
eggNOG-mapper	UHGV-0031949_7	411473.RUMCAL_03189	204.0	0	N/A	N/A
structural_annotation	UHGV-0031949_7	PF20765	N/A	N/A	N/A	N/A
PHROG	UHGV-0031949_8	phrog_5	66.9	4.5e-19	tail completion or Neck1 protein	connector
UniRef90	UHGV-0031949_8	UniRef90_U2KW23	202.0	0	Phage protein, HK97 gp10 family	N/A
eggNOG-mapper	UHGV-0031949_8	411473.RUMCAL_01154	202.0	0	N/A	N/A
Pfam	UHGV-0031949_8	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-0031949_8	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-0031949_9	phrog_25	67.7	1.6e-19	head closure Hc1	connector
UniRef90	UHGV-0031949_9	UniRef90_A0A1C6CLJ6	216.0	0	Bacteriophage head-tail adaptor	N/A
eggNOG-mapper	UHGV-0031949_9	411473.RUMCAL_03191	216.0	0	Phage head-tail joining protein	N/A
Pfam	UHGV-0031949_9	PF05521	N/A	N/A	Phage head-tail joining protein	Phage_H_T_join
NCBIFam	UHGV-0031949_9	TIGR01563.1	N/A	N/A	phage head closure protein	N/A
COG	UHGV-0031949_9	COG5614	N/A	N/A	Phage head-tail adaptor	N/A
structural_annotation	UHGV-0031949_9	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0031949_10	phrog_40	58.2	1.1e-16	head-tail adaptor Ad1	connector
UniRef90	UHGV-0031949_10	UniRef90_U2K771	167.0	0	Phage DNA packaging protein	N/A
eggNOG-mapper	UHGV-0031949_10	411473.RUMCAL_03192	167.0	0	Phage DNA packaging protein	N/A
Pfam	UHGV-0031949_10	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
NCBIFam	UHGV-0031949_10	TIGR01560.2	N/A	N/A	head-tail connector protein	N/A
structural_annotation	UHGV-0031949_10	PF05135,TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-0031949_11	phrog_10	335.2	0	major head protein	head and packaging
UniRef90	UHGV-0031949_11	UniRef90_U2KTH2	662.0	0	Phage major capsid protein, HK97 family	N/A
eggNOG-mapper	UHGV-0031949_11	411473.RUMCAL_01623	662.0	0	Phage major capsid protein, HK97 family	N/A
Pfam	UHGV-0031949_11	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0031949_11	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0031949_11	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0031949_11	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-0031949_12	K01358	142.6	3.59994e-42	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-0031949_12	phrog_94	259.0	0	head maturation protease	head and packaging
UniRef90	UHGV-0031949_12	UniRef90_A0A1C6CKN2	435.0	0	ATP-dependent Clp protease proteolytic subunit	N/A
eggNOG-mapper	UHGV-0031949_12	411473.RUMCAL_01624	450.0	0	Belongs to the peptidase S14 family	N/A
Pfam	UHGV-0031949_12	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-0031949_12	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-0031949_12	PF00574,MF_00444,NF011089,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-0031949_13	phrog_12	403.1	0	portal protein	head and packaging
UniRef90	UHGV-0031949_13	UniRef90_U2M1G3	809.0	0	Phage portal protein, HK97 family	N/A
eggNOG-mapper	UHGV-0031949_13	411473.RUMCAL_01625	809.0	0	Phage portal protein, HK97 family	N/A
Pfam	UHGV-0031949_13	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-0031949_13	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-0031949_13	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0031949_13	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
UniRef90	UHGV-0031949_14	UniRef90_A0A0M1UUN6	337.0	0	Putative membrane protein	N/A
eggNOG-mapper	UHGV-0031949_14	1226325.HMPREF1548_04855	379.0	0	N/A	N/A
PHROG	UHGV-0031949_15	phrog_7331	92.7	2.2e-27	terminase large subunit	head and packaging
UniRef90	UHGV-0031949_15	UniRef90_R7H9J6	175.0	0	Putative phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0031949_15	411473.RUMCAL_01628	176.0	0	large subunit	N/A
Pfam	UHGV-0031949_15	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0031949_15	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
PHROG	UHGV-0031949_16	phrog_21357	73.1	2.9e-21	endolysin	lysis
UniRef90	UHGV-0031949_16	UniRef90_A0A3C2BCE4	270.0	0	Peptidase C51 domain-containing protein (Fragment)	N/A
eggNOG-mapper	UHGV-0031949_16	1514668.JOOA01000001_gene183	110.0	4.06e-27	PFAM Peptidoglycan-binding domain 1 protein	N/A
Pfam	UHGV-0031949_16	PF05257	N/A	N/A	CHAP domain	CHAP
Pfam	UHGV-0031949_16	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
COG	UHGV-0031949_16	COG3409	N/A	N/A	Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases	N/A
structural_annotation	UHGV-0031949_16	PF01471,TIGR02594,NF038080,COG3409,COG3942	N/A	N/A	N/A	N/A
PHROG	UHGV-0031949_17	phrog_373	115.4	6.3e-34	anti-repressor	transcription regulation
UniRef90	UHGV-0031949_17	UniRef90_UPI00177DA2F7	105.0	5.09e-23	Rha family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0031949_17	552396.HMPREF0863_00753	117.0	2.28e-28	AntA/AntB antirepressor	N/A
Pfam	UHGV-0031949_17	PF09669	N/A	N/A	Phage regulatory protein Rha (Phage_pRha)	Phage_pRha
NCBIFam	UHGV-0031949_17	TIGR02681.1	N/A	N/A	phage regulatory protein, Rha family	N/A
COG	UHGV-0031949_17	COG3561	N/A	N/A	Phage anti-repressor protein Ant	N/A
UniRef90	UHGV-0031949_18	UniRef90_A0A8D9UIC9	63.5	0.00000000000403	Alginate and motility regulator	N/A
eggNOG-mapper	UHGV-0031949_18	476272.RUMHYD_01983	56.6	0.000000000349	N/A	N/A
Pfam	UHGV-0031949_18	PF01402	N/A	N/A	Ribbon-helix-helix protein, copG family	RHH_1
structural_annotation	UHGV-0031949_18	PF01402,NF041793,COG4453	N/A	N/A	N/A	N/A
PHROG	UHGV-0031949_19	phrog_13256	77.5	8.2e-23	N/A	unknown function
eggNOG-mapper	UHGV-0031949_19	1160721.RBI_II00522	83.6	1.03e-20	N/A	N/A
PHROG	UHGV-0031949_20	phrog_1863	63.5	1.9e-18	N/A	unknown function
eggNOG-mapper	UHGV-0031949_20	665956.HMPREF1032_03922	72.8	8.3e-16	N/A	N/A
PHROG	UHGV-0031949_22	phrog_23052	107.6	8.6e-32	N/A	unknown function
eggNOG-mapper	UHGV-0031949_22	397290.C810_01268	116.0	5.42e-25	N/A	N/A
PHROG	UHGV-0031949_23	phrog_1194	47.4	0.00000000000031	N/A	unknown function
structural_annotation	UHGV-0031949_23	PF20458,TIGR01633,COG4718	N/A	N/A	N/A	N/A
PHROG	UHGV-0031949_24	phrog_1535	543.6	0	tail length tape measure protein	tail
UniRef90	UHGV-0031949_24	UniRef90_W0U887	576.0	0	Putative minor tail protein	N/A
eggNOG-mapper	UHGV-0031949_24	1160721.RBI_II00528	576.0	0	Phage tail tape measure protein, TP901 family	N/A
COG	UHGV-0031949_24	COG1006	N/A	N/A	Multisubunit Na+/H+ antiporter, MnhC subunit	N/A
structural_annotation	UHGV-0031949_24	PF20155,TIGR01760,COG5281	N/A	N/A	N/A	N/A
PHROG	UHGV-0031949_25	phrog_706	136.4	1.8e-40	N/A	unknown function
UniRef90	UHGV-0031949_25	UniRef90_UPI001B3C82AE	234.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-0031949_25	1449050.JNLE01000003_gene3882	199.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0031949_25	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0031949_25	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0031949_26	phrog_11299	110.8	1.1e-32	N/A	unknown function
eggNOG-mapper	UHGV-0031949_26	1160721.RBI_II00531	78.6	1.92e-16	N/A	N/A
structural_annotation	UHGV-0031949_26	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-0031949_27	phrog_3099	164.2	0	N/A	unknown function
eggNOG-mapper	UHGV-0031949_27	1449050.JNLE01000003_gene3884	196.0	0	N/A	N/A
structural_annotation	UHGV-0031949_27	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0031949_28	phrog_3266	102.9	2.1e-30	tail completion	connector
eggNOG-mapper	UHGV-0031949_28	1449050.JNLE01000003_gene3885	131.0	4.09e-37	N/A	N/A
structural_annotation	UHGV-0031949_28	PF20765	N/A	N/A	N/A	N/A
PHROG	UHGV-0031949_29	phrog_556	77.5	1.4e-22	minor head protein	head and packaging
UniRef90	UHGV-0031949_29	UniRef90_UPI001C8E2A32	59.7	0.00000000537	minor capsid protein	N/A
eggNOG-mapper	UHGV-0031949_29	411470.RUMGNA_02222	57.4	0.00000000701	N/A	N/A
Pfam	UHGV-0031949_29	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0031949_29	PF11114	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0031949_30	748224.HMPREF9436_00693	80.5	4.99e-17	N/A	N/A
PHROG	UHGV-0031949_31	phrog_137	78.3	8e-23	head-tail adaptor Ad1	connector
UniRef90	UHGV-0031949_31	UniRef90_R6C7E8	128.0	2.14e-35	Phage protein Gp19/Gp15/Gp42	N/A
eggNOG-mapper	UHGV-0031949_31	873448.STRPO_0287	106.0	1.72e-27	Phage protein Gp19/Gp15/Gp42	N/A
Pfam	UHGV-0031949_31	PF09355	N/A	N/A	N/A	Phage_Gp19
structural_annotation	UHGV-0031949_31	PF09355	N/A	N/A	N/A	N/A
PHROG	UHGV-0031949_32	phrog_32396	121.8	2.5e-36	N/A	unknown function
UniRef90	UHGV-0031949_32	UniRef90_UPI001C38B0D8	367.0	0	phage major capsid protein	N/A
eggNOG-mapper	UHGV-0031949_32	706433.HMPREF9430_01265	370.0	0	Phage capsid family	N/A
Pfam	UHGV-0031949_32	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
structural_annotation	UHGV-0031949_32	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0031949_33	phrog_233	72.4	1.1e-20	head scaffolding protein	head and packaging
UniRef90	UHGV-0031949_33	UniRef90_A0A373VN88	108.0	1.51e-27	N/A	N/A
eggNOG-mapper	UHGV-0031949_33	665950.HMPREF1025_02531	69.7	0.000000000000382	N/A	N/A
structural_annotation	UHGV-0031949_33	PF14265	N/A	N/A	N/A	N/A
PHROG	UHGV-0031949_34	phrog_17688	338.5	0	N/A	unknown function
UniRef90	UHGV-0031949_34	UniRef90_A0A3C2BAA2	952.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0031949_34	1280698.AUJS01000007_gene1036	568.0	0	phage terminase, large subunit	N/A
COG	UHGV-0031949_34	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0031949_34	PF20441,PF03354,MF_04146,NF033889,COG4626	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0031949_35	PF11607,MF_01077,NF037951,COG4568	N/A	N/A	N/A	N/A
UniRef90	UHGV-0031949_36	UniRef90_A0A3C2BBJ4	339.0	0	Ntox50 domain-containing protein	N/A
eggNOG-mapper	UHGV-0031949_36	641112.ACOK01000073_gene2890	130.0	5.89e-33	N/A	N/A
Pfam	UHGV-0031949_36	PF15542	N/A	N/A	Bacterial toxin 50	Ntox50
COG	UHGV-0031949_36	COG2369	N/A	N/A	N/A	N/A