UHGV-0032611 (vOTU-131326)

Viral Genome: UHGV-0032611

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0032611
vOTU ID	vOTU-131326
Representative Genome?	Yes
Source	Hadza
Original genome ID	Hadza_MoBio_hadza-I-L_G_7_2399__NODE_2091_length_35517_cov_40.903979
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	61.61 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	10
CheckV host markers	1
Recoded stop codon	No

Viral Content
geNomad score	0.9797
Virus hallmark genes (geNomad)	6
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	17.27
Jumbo phage	No

Genome content
Genome length (bp)	35,517
GC content	49.35%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	54
CDS density	91%
Average CDS length (bps)	598.11
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 61.61)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0032611_1	phrog_64	149.2	1.96182e-44	portal protein	head and packaging
UniRef90	UHGV-0032611_1	UniRef90_A0A371ILT4	312.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0032611_1	1121866.AUGK01000003_gene1429	267.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0032611_1	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0032611_1	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0032611_4	phrog_29	205.6	0	major head protein	head and packaging
UniRef90	UHGV-0032611_4	UniRef90_A0A2Z4QBB4	385.0	0	Major capsid protein E	N/A
eggNOG-mapper	UHGV-0032611_4	1347368.HG964404_gene4993	275.0	0	Phage major capsid protein E	N/A
Pfam	UHGV-0032611_4	PF03864	N/A	N/A	Phage major capsid protein E	Phage_cap_E
structural_annotation	UHGV-0032611_4	PF03864,MF_04133,NF041162,COG4653	N/A	N/A	N/A	N/A
UniRef90	UHGV-0032611_5	UniRef90_R6N215	82.4	3.72e-18	Phage QLRG family putative DNA packaging	N/A
structural_annotation	UHGV-0032611_5	TIGR01560	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0032611_6	PF19586,TIGR01563,COG5614	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0032611_7	397290.C810_01411	54.7	0.000000785	N/A	N/A
structural_annotation	UHGV-0032611_8	PF06141,TIGR02367,COG3167	N/A	N/A	N/A	N/A
PHROG	UHGV-0032611_9	phrog_158	42.4	0.000000000011	major tail protein	tail
UniRef90	UHGV-0032611_9	UniRef90_UPI001D087591	115.0	1.76e-30	phage tail protein	N/A
eggNOG-mapper	UHGV-0032611_9	1449343.JQLQ01000002_gene1514	58.2	0.0000000143	Phage tail tube protein, TTP	N/A
structural_annotation	UHGV-0032611_9	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
UniRef90	UHGV-0032611_10	UniRef90_A0A847YX95	71.2	0.000000000000102	N/A	N/A
eggNOG-mapper	UHGV-0032611_10	1123263.AUKY01000015_gene1618	62.4	0.0000000000488	N/A	N/A
Pfam	UHGV-0032611_10	PF16478	N/A	N/A	N/A	DUF5055
structural_annotation	UHGV-0032611_10	PF16478	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0032611_11	1121333.JMLH01000047_gene1011	78.2	1.38e-16	N/A	N/A
PHROG	UHGV-0032611_12	phrog_1535	152.6	0	tail length tape measure protein	tail
eggNOG-mapper	UHGV-0032611_12	1121866.AUGK01000003_gene1437	202.0	0	phage tail tape measure protein	N/A
COG	UHGV-0032611_12	COG1280	N/A	N/A	Threonine/homoserine/homoserine lactone efflux protein	N/A
PHROG	UHGV-0032611_13	phrog_1194	85.1	5.8e-25	N/A	unknown function
eggNOG-mapper	UHGV-0032611_13	665956.HMPREF1032_03056	53.5	0.000000331	N/A	N/A
Pfam	UHGV-0032611_13	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-0032611_13	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0032611_14	phrog_13879	205.9	0	N/A	unknown function
eggNOG-mapper	UHGV-0032611_14	324057.Pjdr2_1554	130.0	6.97e-29	N/A	N/A
Pfam	UHGV-0032611_14	PF19789	N/A	N/A	N/A	DUF6273
structural_annotation	UHGV-0032611_14	PF14594,PF19789,PF03256,PF09134,NF033848,COG3500,COG5156	N/A	N/A	N/A	N/A
PHROG	UHGV-0032611_15	phrog_18725	43.3	3.1e-16	N/A	unknown function
UniRef90	UHGV-0032611_15	UniRef90_UPI001D0EF571	216.0	0	Ig-like domain-containing protein	N/A
eggNOG-mapper	UHGV-0032611_15	718252.FP2_14370	183.0	0	domain, Protein	N/A
COG	UHGV-0032611_15	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0032611_15	PF15417,NF041539	N/A	N/A	N/A	N/A
Pfam	UHGV-0032611_16	PF09693	N/A	N/A	Phage uncharacterised protein (Phage_XkdX)	Phage_XkdX
eggNOG-mapper	UHGV-0032611_17	411483.FAEPRAA2165_00757	175.0	0	N/A	N/A
structural_annotation	UHGV-0032611_17	PF10651	N/A	N/A	N/A	N/A
KOfam	UHGV-0032611_19	K07273	166.8	0	acm; lysozyme	N/A
PHROG	UHGV-0032611_19	phrog_291	128.5	5.5e-38	endolysin	lysis
UniRef90	UHGV-0032611_19	UniRef90_A0A564U0D3	361.0	0	Autolytic lysozyme	N/A
eggNOG-mapper	UHGV-0032611_19	718252.FP2_04890	219.0	0	hydrolase, family 25	N/A
Pfam	UHGV-0032611_19	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-0032611_19	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-0032611_19	PF01183,NF007404,COG3757	N/A	N/A	N/A	N/A
PHROG	UHGV-0032611_21	phrog_15303	79.0	4.9e-23	N/A	unknown function
PHROG	UHGV-0032611_26	phrog_16490	105.7	4e-39	N/A	unknown function
eggNOG-mapper	UHGV-0032611_26	1408437.JNJN01000043_gene803	164.0	0	N/A	N/A
eggNOG-mapper	UHGV-0032611_27	1408437.JNJN01000043_gene802	123.0	1.11e-34	N/A	N/A
eggNOG-mapper	UHGV-0032611_28	1408437.JNJN01000043_gene801	86.7	2.85e-18	N/A	N/A
PHROG	UHGV-0032611_29	phrog_7070	114.4	3e-34	N/A	unknown function
eggNOG-mapper	UHGV-0032611_29	1195072.M4HPW0_9CAUD	92.0	1.38e-22	N/A	N/A
structural_annotation	UHGV-0032611_33	MF_00273	N/A	N/A	N/A	N/A
KOfam	UHGV-0032611_35	K13525	126.1	1.3e-37	VCP, CDC48; transitional endoplasmic reticulum ATPase	N/A
PHROG	UHGV-0032611_35	phrog_3757	201.2	0	N/A	unknown function
UniRef90	UHGV-0032611_35	UniRef90_A0A4Z0Y6M2	355.0	0	ATP-dependent zinc metalloprotease FtsH 3	N/A
eggNOG-mapper	UHGV-0032611_35	768710.DesyoDRAFT_1087	207.0	0	ATPase family associated with various cellular activities (AAA)	N/A
PADLOC	UHGV-0032611_35	IetA_00002	186.3	0	NA	ietAS
Pfam	UHGV-0032611_35	PF00004	N/A	N/A	ATPase family associated with various cellular activities (AAA)	AAA
COG	UHGV-0032611_35	COG0464	N/A	N/A	AAA+-type ATPase, SpoVK/Ycf46/Vps4 family	N/A
structural_annotation	UHGV-0032611_35	PF00004,MF_00553,TIGR01242,COG1222	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0032611_36	PF07878	N/A	N/A	N/A	N/A
KOfam	UHGV-0032611_38	K03496	231.0	0	parA, soj; chromosome partitioning protein	N/A
PHROG	UHGV-0032611_38	phrog_164	160.7	0	ParA-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0032611_38	UniRef90_A0A349QN03	209.0	0	Chromosome partitioning protein ParA	N/A
eggNOG-mapper	UHGV-0032611_38	1408423.JHYA01000021_gene392	196.0	0	Cellulose biosynthesis protein BcsQ	N/A
Pfam	UHGV-0032611_38	PF13614	N/A	N/A	AAA domain	AAA_31
COG	UHGV-0032611_38	COG1192	N/A	N/A	ParA-like ATPase involved in chromosome/plasmid partitioning or cellulose biosynthesis protein BcsQ	N/A
structural_annotation	UHGV-0032611_38	PF13614,MF_00533,NF010443,COG1192	N/A	N/A	N/A	N/A
PHROG	UHGV-0032611_39	phrog_4402	107.5	1.1e-31	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0032611_39	UniRef90_A0A0H5Q331	266.0	0	Rep_3 domain-containing protein	N/A
eggNOG-mapper	UHGV-0032611_39	999413.HMPREF1094_04438	147.0	3.62e-38	Initiator Replication protein	N/A
Pfam	UHGV-0032611_39	PF01051	N/A	N/A	Initiator Replication protein, WH1	Rep3_N
Pfam	UHGV-0032611_39	PF21205	N/A	N/A	Initiator Rep protein, WH2	Rep3_C
COG	UHGV-0032611_39	COG5527	N/A	N/A	Protein involved in initiation of plasmid replication	N/A
structural_annotation	UHGV-0032611_39	PF01051,PF21205,NF010305,COG5527	N/A	N/A	N/A	N/A
PHROG	UHGV-0032611_40	phrog_1373	41.9	0.0000000000079	transcriptional regulator	transcription regulation
UniRef90	UHGV-0032611_40	UniRef90_A0A2A7B6N3	196.0	0	HTH cro/C1-type domain-containing protein	N/A
Pfam	UHGV-0032611_40	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0032611_40	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0032611_40	PF13560,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0032611_45	phrog_8	47.1	0.00000000000051	transcriptional regulator	transcription regulation
UniRef90	UHGV-0032611_45	UniRef90_UPI001D05D211	75.1	0.0000000000000033	helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-0032611_45	693746.OBV_43290	68.6	0.000000000000376	addiction module antidote protein HigA	N/A
COG	UHGV-0032611_45	COG3093	N/A	N/A	Plasmid maintenance system antidote protein VapI, contains XRE-type HTH domain	N/A
PHROG	UHGV-0032611_46	phrog_1468	40.1	0.000000000038	transcriptional repressor	transcription regulation
UniRef90	UHGV-0032611_46	UniRef90_UPI001956DCC9	68.2	0.0000000000000845	helix-turn-helix transcriptional regulator	N/A
Pfam	UHGV-0032611_46	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0032611_46	PF13560,NF041951,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0032611_47	K07741	91.3	2.7e-26	antB; anti-repressor protein	N/A
PHROG	UHGV-0032611_47	phrog_63	191.0	0	anti-repressor Ant	transcription regulation
UniRef90	UHGV-0032611_47	UniRef90_A0A844D5R9	333.0	0	Phage regulatory protein/antirepressor Ant	N/A
eggNOG-mapper	UHGV-0032611_47	1449343.JQLQ01000002_gene1368	250.0	0	Phage regulatory protein Rha (Phage_pRha)	N/A
Pfam	UHGV-0032611_47	PF09669	N/A	N/A	Phage regulatory protein Rha (Phage_pRha)	Phage_pRha
Pfam	UHGV-0032611_47	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
NCBIFam	UHGV-0032611_47	TIGR02681.1	N/A	N/A	phage regulatory protein, Rha family	N/A
COG	UHGV-0032611_47	COG3645	N/A	N/A	Phage antirepressor protein YoqD, KilAC domain	N/A
structural_annotation	UHGV-0032611_47	PF03374,PF09669,TIGR02681,COG3645,COG3561	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0032611_50	760568.Desku_0919	96.3	6.71e-22	N/A	N/A
structural_annotation	UHGV-0032611_50	PF03787,TIGR02581,COG1604	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0032611_52	PF14143	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0032611_53	1392491.JIAE01000001_gene943	47.8	0.00000841	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes	N/A
COG	UHGV-0032611_53	COG1327	N/A	N/A	Transcriptional regulator NrdR, contains Zn-ribbon and ATP-cone domains	N/A
structural_annotation	UHGV-0032611_53	PF04606,NF007241	N/A	N/A	N/A	N/A