UHGV-0033011 (vOTU-074322)

Viral Genome: UHGV-0033011

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0033011
vOTU ID	vOTU-074322
Representative Genome?	Yes
Source	Hadza
Original genome ID	Hadza_MoBio_hadza-I-L_K_6_2620__NODE_1886_length_35936_cov_35.000335
Associated BioSample	SAMEA4766366
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	99.9 (High-quality)
Trimmed provirus	No
CheckV viral markers	18
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9769
Virus hallmark genes (geNomad)	12
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	27.02
Jumbo phage	No

Genome content
Genome length (bp)	35,936
GC content	39.78%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	47
CDS density	90%
Average CDS length (bps)	685.92
Total tRNA genes	1
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 99.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-0033011_1	UniRef90_A0A2N0UVF0	298.0	0	CBM26 domain-containing protein	N/A
eggNOG-mapper	UHGV-0033011_1	33905.BTHE_1898	99.8	3.51e-23	Belongs to the glycosyl hydrolase 31 family	N/A
Pfam	UHGV-0033011_1	PF16738	N/A	N/A	Starch-binding module 26	CBM26
COG	UHGV-0033011_1	COG1501	N/A	N/A	Alpha-glucosidase/xylosidase, GH31 family	N/A
UniRef90	UHGV-0033011_5	UniRef90_A0A374MZ40	106.0	3.44e-29	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0033011_5	411459.RUMOBE_01706	49.3	0.000000268	N/A	N/A
Pfam	UHGV-0033011_5	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0033011_5	PF01381,NF040522,COG2944	N/A	N/A	N/A	N/A
KOfam	UHGV-0033011_6	K01448	56.6	4e-16	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0033011_6	phrog_435	85.1	1.1e-24	endolysin	lysis
UniRef90	UHGV-0033011_6	UniRef90_A0A373KFY8	439.0	0	SH3b domain-containing protein	N/A
eggNOG-mapper	UHGV-0033011_6	1519439.JPJG01000059_gene1952	87.0	6.02e-17	N-acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-0033011_6	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
COG	UHGV-0033011_6	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0033011_6	PF01520,PF18342,NF038140,COG0860,COG4991	N/A	N/A	N/A	N/A
PHROG	UHGV-0033011_7	phrog_443	52.6	0.000000000000013	holin	lysis
UniRef90	UHGV-0033011_7	UniRef90_UPI000C088FD8	78.6	8.55e-18	holin	N/A
eggNOG-mapper	UHGV-0033011_7	1298920.KI911353_gene2669	77.8	2.89e-18	Putative lactococcus lactis phage r1t holin	N/A
Pfam	UHGV-0033011_7	PF16945	N/A	N/A	Putative lactococcus lactis phage r1t holin	Phage_r1t_holin
structural_annotation	UHGV-0033011_7	PF16945	N/A	N/A	N/A	N/A
PHROG	UHGV-0033011_8	phrog_4105	82.3	4.3e-24	N/A	unknown function
eggNOG-mapper	UHGV-0033011_8	592026.GCWU0000282_003290	62.8	0.0000000000254	N/A	N/A
PHROG	UHGV-0033011_10	phrog_5302	279.8	0	tail protein	tail
UniRef90	UHGV-0033011_10	UniRef90_A0A373XLZ6	1004.0	0	N/A	N/A
eggNOG-mapper	UHGV-0033011_10	742740.HMPREF9474_02337	306.0	0	cellulose 1,4-beta-cellobiosidase activity	N/A
COG	UHGV-0033011_10	COG5301	N/A	N/A	Phage-related tail fiber protein	N/A
structural_annotation	UHGV-0033011_10	COG1262	N/A	N/A	N/A	N/A
PHROG	UHGV-0033011_11	phrog_1067	88.7	2.1e-26	minor head protein	head and packaging
UniRef90	UHGV-0033011_11	UniRef90_A0A1G5CPD2	147.0	7.62e-37	Phage minor structural protein, N-terminal region	N/A
eggNOG-mapper	UHGV-0033011_11	1462527.CCDM010000003_gene3730	60.8	0.000000468	gp58-like protein	N/A
NCBIFam	UHGV-0033011_11	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0033011_11	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0033011_11	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0033011_12	phrog_33	74.6	2.3e-21	distal tail protein Dit	tail
UniRef90	UHGV-0033011_12	UniRef90_A0A1G5CPA2	132.0	6.61e-34	Phage-related protein	N/A
eggNOG-mapper	UHGV-0033011_12	1160721.RBI_I01575	89.7	1.33e-18	Phage tail protein	N/A
COG	UHGV-0033011_12	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0033011_12	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
KOfam	UHGV-0033011_13	K20283	63.2	3.6e-19	GOLGA4; golgin subfamily A member 4	N/A
PHROG	UHGV-0033011_13	phrog_1272	254.8	0	tail length tape measure protein	tail
UniRef90	UHGV-0033011_13	UniRef90_A0A412ULX0	1681.0	0	PhageMin_Tail domain-containing protein	N/A
eggNOG-mapper	UHGV-0033011_13	588581.Cpap_1264	253.0	0	Tail tape measure protein, TP901 family	N/A
Pfam	UHGV-0033011_13	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
COG	UHGV-0033011_13	COG5280	N/A	N/A	Phage-related minor tail protein	N/A
structural_annotation	UHGV-0033011_13	PF10145,TIGR01760,COG5280	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0033011_14	PF11836	N/A	N/A	N/A	N/A
PHROG	UHGV-0033011_15	phrog_88	77.9	1.3e-22	major tail protein	tail
UniRef90	UHGV-0033011_15	UniRef90_A0A1G5CNS8	153.0	2.31214e-43	Phage major tail protein, phi13 family	N/A
eggNOG-mapper	UHGV-0033011_15	946235.CAER01000065_gene2438	61.6	0.00000000483	phage tail protein	N/A
NCBIFam	UHGV-0033011_15	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-0033011_15	PF06488,TIGR01603,COG3498	N/A	N/A	N/A	N/A
UniRef90	UHGV-0033011_16	UniRef90_UPI000E5564A4	276.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0033011_16	1235792.C808_00089	50.4	0.00000606	Bacteriophage HK97-gp10, putative tail-component	N/A
Pfam	UHGV-0033011_16	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-0033011_16	TIGR01725	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0033011_17	272623.L59277	48.9	0.00000658	N/A	N/A
structural_annotation	UHGV-0033011_17	PF05657,MF_00281,COG0016	N/A	N/A	N/A	N/A
PHROG	UHGV-0033011_18	phrog_19734	73.4	2.8e-21	N/A	unknown function
UniRef90	UHGV-0033011_18	UniRef90_UPI00057FE645	59.7	0.00000000312	phage head closure protein	N/A
eggNOG-mapper	UHGV-0033011_18	86416.Clopa_0343	62.8	0.0000000000401	N/A	N/A
NCBIFam	UHGV-0033011_18	TIGR01563.1	N/A	N/A	phage head closure protein	N/A
structural_annotation	UHGV-0033011_18	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0033011_19	phrog_749	57.0	3e-16	N/A	unknown function
UniRef90	UHGV-0033011_19	UniRef90_A0A1G5CMX8	108.0	7.47e-29	Phage gp6-like head-tail connector protein	N/A
eggNOG-mapper	UHGV-0033011_19	1211817.CCAT010000053_gene2133	60.8	0.000000000103	N/A	N/A
PHROG	UHGV-0033011_20	phrog_10	128.8	5.3e-38	major head protein	head and packaging
UniRef90	UHGV-0033011_20	UniRef90_A0A412ULW9	736.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-0033011_20	1211817.CCAT010000053_gene2132	322.0	0	Phage capsid family	N/A
Pfam	UHGV-0033011_20	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0033011_20	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0033011_20	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0033011_20	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-0033011_21	K01358	140.2	1.99993e-41	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-0033011_21	phrog_94	203.0	0	head maturation protease	head and packaging
UniRef90	UHGV-0033011_21	UniRef90_A0A412ULU1	450.0	0	ATP-dependent Clp protease proteolytic subunit	N/A
eggNOG-mapper	UHGV-0033011_21	1211817.CCAT010000053_gene2131	176.0	0	Belongs to the peptidase S14 family	N/A
Pfam	UHGV-0033011_21	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-0033011_21	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-0033011_21	PF00574,MF_00444,NF011090,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-0033011_22	phrog_12	101.8	5.6e-30	portal protein	head and packaging
UniRef90	UHGV-0033011_22	UniRef90_A0A412ULV9	744.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0033011_22	1415774.U728_1254	259.0	0	Phage portal protein	N/A
Pfam	UHGV-0033011_22	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-0033011_22	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-0033011_22	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0033011_22	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-0033011_23	phrog_9	285.4	0	terminase large subunit	head and packaging
UniRef90	UHGV-0033011_23	UniRef90_A0A412UM03	1033.0	0	Terminase large subunit	N/A
eggNOG-mapper	UHGV-0033011_23	86416.Clopa_0337	606.0	0	Phage Terminase	N/A
Pfam	UHGV-0033011_23	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0033011_23	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0033011_23	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0033011_23	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0033011_24	phrog_5110	78.9	4.5e-23	terminase small subunit	head and packaging
UniRef90	UHGV-0033011_24	UniRef90_A0A1M5U1D5	113.0	1.2e-30	Phage terminase, small subunit	N/A
eggNOG-mapper	UHGV-0033011_24	1211817.CCAT010000053_gene2128	100.0	3.14e-26	N/A	N/A
Pfam	UHGV-0033011_24	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
structural_annotation	UHGV-0033011_24	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0033011_25	TIGR01636	N/A	N/A	N/A	N/A
PHROG	UHGV-0033011_26	phrog_3584	142.9	2.10055e-42	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0033011_26	1235800.C819_00515	72.0	0.00000000000374	N/A	N/A
structural_annotation	UHGV-0033011_26	PF21578,NF041486	N/A	N/A	N/A	N/A
PHROG	UHGV-0033011_30	phrog_2118	118.8	4.8e-35	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0033011_30	UniRef90_A0A374DVG7	248.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0033011_30	610130.Closa_0730	151.0	1.4013e-45	HNH endonuclease	N/A
Pfam	UHGV-0033011_30	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-0033011_30	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-0033011_30	TIGR02646,COG1403	N/A	N/A	N/A	N/A
PHROG	UHGV-0033011_32	phrog_824	145.5	1.59748e-43	N/A	unknown function
UniRef90	UHGV-0033011_32	UniRef90_A0A3D3D6C6	243.0	0	VRR-NUC domain-containing protein	N/A
eggNOG-mapper	UHGV-0033011_32	397288.C806_00096	157.0	0	VRR_NUC	N/A
Pfam	UHGV-0033011_32	PF08774	N/A	N/A	VRR-NUC domain	VRR_NUC
structural_annotation	UHGV-0033011_32	PF08774	N/A	N/A	N/A	N/A
PHROG	UHGV-0033011_33	phrog_24518	82.4	5.6e-24	N/A	unknown function
eggNOG-mapper	UHGV-0033011_33	1519439.JPJG01000077_gene922	111.0	6.78e-28	N/A	N/A
KOfam	UHGV-0033011_34	K18830	53.0	0.0000000000000085	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-0033011_34	phrog_8	62.4	1.1e-17	transcriptional regulator	transcription regulation
UniRef90	UHGV-0033011_34	UniRef90_A0A374N9T4	103.0	9.99e-28	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0033011_34	935845.JADQ01000015_gene3206	79.3	4.55e-18	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-0033011_34	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0033011_34	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0033011_34	PF01381,NF041951,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0033011_35	K03427	219.5	0	hsdM; type I restriction enzyme M protein [EC:2.1.1.72]	N/A
PHROG	UHGV-0033011_35	phrog_6380	398.5	0	DNA methyltransferase	other
UniRef90	UHGV-0033011_35	UniRef90_A0A356CYE0	814.0	0	N-6 DNA methylase	N/A
eggNOG-mapper	UHGV-0033011_35	1201292.DR75_1654	329.0	0	type I restriction-modification system	N/A
PADLOC	UHGV-0033011_35	MTase_I_00005	247.2	0	Type I methyltransferase	RM
Pfam	UHGV-0033011_35	PF02384	N/A	N/A	N-6 DNA Methylase	N6_Mtase
COG	UHGV-0033011_35	COG0286	N/A	N/A	Type I restriction-modification system, DNA methylase subunit	N/A
structural_annotation	UHGV-0033011_35	PF02384,PF01420,MF_01872,TIGR00497,COG0286,COG0732	N/A	N/A	N/A	N/A
KOfam	UHGV-0033011_36	K03497	150.7	9.80909e-45	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	N/A
PHROG	UHGV-0033011_36	phrog_6218	251.0	0	ParB-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0033011_36	UniRef90_UPI000E47CAB6	495.0	0	ParB/RepB/Spo0J family partition protein	N/A
eggNOG-mapper	UHGV-0033011_36	1408437.JNJN01000030_gene1074	245.0	0	Belongs to the ParB family	N/A
Pfam	UHGV-0033011_36	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
NCBIFam	UHGV-0033011_36	TIGR00180.1	N/A	N/A	ParB/RepB/Spo0J family partition protein	N/A
COG	UHGV-0033011_36	COG0710	N/A	N/A	3-dehydroquinate dehydratase	N/A
structural_annotation	UHGV-0033011_36	PF18579,MF_02015,TIGR00180,COG1475	N/A	N/A	N/A	N/A
PHROG	UHGV-0033011_40	phrog_6058	42.4	0.0000000000075	N/A	unknown function
structural_annotation	UHGV-0033011_40	NF033787	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0033011_41	PF11614,TIGR02588,COG2847	N/A	N/A	N/A	N/A
UniRef90	UHGV-0033011_43	UniRef90_A0A374DVN3	161.0	0	DNA-binding protein	N/A
eggNOG-mapper	UHGV-0033011_43	1219626.HMPREF1639_07045	47.8	0.00000322	N/A	N/A
UniRef90	UHGV-0033011_44	UniRef90_A0A373XLN2	154.0	1.4013e-45	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0033011_44	1235793.C809_00679	58.5	0.00000000353	Helix-turn-helix XRE-family like proteins	N/A
structural_annotation	UHGV-0033011_44	PF05339,NF007257,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-0033011_45	phrog_1914	146.8	1.20512e-43	N/A	unknown function
UniRef90	UHGV-0033011_45	UniRef90_A0A374NDM7	327.0	0	ImmA/IrrE family metallo-endopeptidase	N/A
eggNOG-mapper	UHGV-0033011_45	1160721.RBI_I01604	160.0	0	N/A	N/A
Pfam	UHGV-0033011_45	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
COG	UHGV-0033011_45	COG2856	N/A	N/A	Zn-dependent peptidase ImmA, M78 family	N/A
structural_annotation	UHGV-0033011_45	PF06114,COG2856	N/A	N/A	N/A	N/A
UniRef90	UHGV-0033011_46	UniRef90_UPI000E52DA24	736.0	0	zinc ribbon domain-containing protein	N/A
Pfam	UHGV-0033011_46	PF13240	N/A	N/A	zinc-ribbon domain	zinc_ribbon_2
structural_annotation	UHGV-0033011_46	PF18933,PF02883,MF_02248,NF008627,COG5435,COG2847	N/A	N/A	N/A	N/A
KOfam	UHGV-0033011_47	K14059	93.8	2.7e-27	int; integrase	N/A
PHROG	UHGV-0033011_47	phrog_1	117.0	2.2e-34	integrase	integration and excision
UniRef90	UHGV-0033011_47	UniRef90_A0A1G5CL52	803.0	0	Phage integrase family protein	N/A
eggNOG-mapper	UHGV-0033011_47	693746.OBV_41260	189.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0033011_47	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0033011_47	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-0033011_47	PF00589,MF_01808,NF007246,COG4974	N/A	N/A	N/A	N/A