UHGV-0033186 (vOTU-078383)

Viral Genome: UHGV-0033186

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0033186
vOTU ID	vOTU-078383
Representative Genome?	Yes
Source	Hadza
Original genome ID	Hadza_PheChl_Fiber-Hadza-Nepal_A_2_1112__NODE_4479_length_36589_cov_4.977459
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	99.9 (High-quality)
Trimmed provirus	No
CheckV viral markers	10
CheckV host markers	1
Recoded stop codon	No

Viral Content
geNomad score	0.9765
Virus hallmark genes (geNomad)	13
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	31.6
Jumbo phage	No

Genome content
Genome length (bp)	36,589
GC content	58.61%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	63
CDS density	93%
Average CDS length (bps)	539.48
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 99.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0033186_1	K03497	75.3	1.2e-21	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	N/A
PHROG	UHGV-0033186_1	phrog_27290	280.4	0	N/A	unknown function
UniRef90	UHGV-0033186_1	UniRef90_UPI0003130F10	260.0	0	ParB N-terminal domain-containing protein	N/A
eggNOG-mapper	UHGV-0033186_1	693746.OBV_19860	263.0	0	ParB-like nuclease domain	N/A
Pfam	UHGV-0033186_1	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
COG	UHGV-0033186_1	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
KOfam	UHGV-0033186_2	K03496	189.2	0	parA, soj; chromosome partitioning protein	N/A
PHROG	UHGV-0033186_2	phrog_164	161.0	0	ParA-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0033186_2	UniRef90_A0A845R968	305.0	0	ParA family protein	N/A
eggNOG-mapper	UHGV-0033186_2	742738.HMPREF9460_00854	199.0	0	4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family	N/A
Pfam	UHGV-0033186_2	PF13614	N/A	N/A	AAA domain	AAA_31
COG	UHGV-0033186_2	COG1192	N/A	N/A	ParA-like ATPase involved in chromosome/plasmid partitioning or cellulose biosynthesis protein BcsQ	N/A
structural_annotation	UHGV-0033186_2	PF13614,MF_00533,TIGR03453,COG1192	N/A	N/A	N/A	N/A
KOfam	UHGV-0033186_3	K02314	235.2	0	dnaB; replicative DNA helicase [EC:5.6.2.3]	N/A
PHROG	UHGV-0033186_3	phrog_19	225.4	0	DnaB-like replicative helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0033186_3	UniRef90_A0A3D1V9Y4	229.0	0	DNA helicase	N/A
eggNOG-mapper	UHGV-0033186_3	663278.Ethha_2283	144.0	9.12e-36	Participates in initiation and elongation during chromosome replication	N/A
Pfam	UHGV-0033186_3	PF00772	N/A	N/A	DnaB-like helicase N terminal domain	DnaB
Pfam	UHGV-0033186_3	PF03796	N/A	N/A	DnaB-like helicase C terminal domain	DnaB_C
COG	UHGV-0033186_3	COG0305	N/A	N/A	Replicative DNA helicase	N/A
structural_annotation	UHGV-0033186_3	PF03796,PF00772,MF_04155,TIGR00665,COG0305	N/A	N/A	N/A	N/A
PHROG	UHGV-0033186_4	phrog_270	99.9	3.6e-29	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0033186_4	UniRef90_UPI001F33ADD3	201.0	0	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0033186_4	663278.Ethha_1883	115.0	4.96e-28	N/A	N/A
Pfam	UHGV-0033186_4	PF13730	N/A	N/A	Helix-turn-helix domain	HTH_36
COG	UHGV-0033186_4	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0033186_4	PF02295,MF_01819,TIGR04176,COG3355	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0033186_6	PF01423,MF_00257,NF001963,COG1958	N/A	N/A	N/A	N/A
UniRef90	UHGV-0033186_7	UniRef90_UPI001C96492F	54.3	0.000000252	excisionase family DNA-binding protein	N/A
Pfam	UHGV-0033186_7	PF12728	N/A	N/A	Helix-turn-helix domain	HTH_17
NCBIFam	UHGV-0033186_7	TIGR01764.1	N/A	N/A	excisionase family DNA-binding protein	N/A
structural_annotation	UHGV-0033186_7	PF12728,MF_01155,TIGR01764,COG3311	N/A	N/A	N/A	N/A
PHROG	UHGV-0033186_10	phrog_6499	119.2	1.8e-35	transcriptional regulator	transcription regulation
UniRef90	UHGV-0033186_10	UniRef90_A0A3D4EJF0	132.0	1.86e-36	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0033186_10	1415774.U728_1274	106.0	1.92e-27	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0033186_10	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0033186_10	COG1813	N/A	N/A	Archaeal ribosome-binding protein aMBF1, putative translation factor, contains Zn-ribbon and HTH domains	N/A
structural_annotation	UHGV-0033186_10	PF01381,MF_00535,NF040522,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0033186_11	K22300	63.4	5.4e-18	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0033186_11	phrog_8	56.0	0.000000000000001	transcriptional regulator	transcription regulation
UniRef90	UHGV-0033186_11	UniRef90_UPI001BB47897	67.8	0.000000000000247	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0033186_11	1226322.HMPREF1545_00090	60.5	0.0000000000305	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-0033186_11	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0033186_11	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0033186_11	PF01381,MF_00535,NF041951,COG1396	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0033186_13	COG2005	N/A	N/A	N/A	N/A
KOfam	UHGV-0033186_15	K22300	60.5	4.1e-17	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0033186_15	phrog_8	68.5	1.3e-19	transcriptional regulator	transcription regulation
UniRef90	UHGV-0033186_15	UniRef90_UPI000D1E8240	73.9	0.00000000000000546	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0033186_15	1094508.Tsac_0848	63.5	0.0000000000171	Helix-turn-helix XRE-family like proteins	N/A
PADLOC	UHGV-0033186_15	retron_type_VI_hth_cluster2_1	40.7	0.000000000066	N/A	Retron
Pfam	UHGV-0033186_15	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0033186_15	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0033186_15	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
UniRef90	UHGV-0033186_16	UniRef90_A0A3D3Y4M8	58.2	0.000000394	HTH cro/C1-type domain-containing protein	N/A
COG	UHGV-0033186_16	COG3655	N/A	N/A	DNA-binding transcriptional regulator, XRE family	N/A
structural_annotation	UHGV-0033186_16	PF13443,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-0033186_17	phrog_10292	44.2	0.0000000000036	N/A	unknown function
eggNOG-mapper	UHGV-0033186_17	411473.RUMCAL_01852	85.5	4.91e-18	TM2 domain	N/A
Pfam	UHGV-0033186_17	PF05154	N/A	N/A	TM2 domain	TM2
Pfam	UHGV-0033186_17	PF09851	N/A	N/A	Short C-terminal domain	SHOCT
COG	UHGV-0033186_17	COG2314	N/A	N/A	N/A	N/A
KOfam	UHGV-0033186_18	K14059	221.7	0	int; integrase	N/A
PHROG	UHGV-0033186_18	phrog_1	189.5	0	integrase	integration and excision
UniRef90	UHGV-0033186_18	UniRef90_A0A3D1VH24	304.0	0	Site-specific integrase	N/A
eggNOG-mapper	UHGV-0033186_18	742738.HMPREF9460_04031	258.0	0	Phage integrase family	N/A
Pfam	UHGV-0033186_18	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-0033186_18	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0033186_18	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0033186_18	PF00589,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
UniRef90	UHGV-0033186_19	UniRef90_A0A7M1RTM1	72.8	0.000000000000571	RNA polymerase sigma factor/ubiquitin-like protein	N/A
eggNOG-mapper	UHGV-0033186_19	1408437.JNJN01000043_gene801	79.0	4.4e-16	N/A	N/A
structural_annotation	UHGV-0033186_20	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-0033186_22	phrog_22984	50.6	0.000000000000034	N/A	unknown function
structural_annotation	UHGV-0033186_23	PF20477,NF033819	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0033186_25	NF010256	N/A	N/A	N/A	N/A
PHROG	UHGV-0033186_27	phrog_1129	67.9	1.1e-19	holin	lysis
UniRef90	UHGV-0033186_27	UniRef90_UPI00189DD88C	124.0	1.71e-35	phage holin family protein	N/A
eggNOG-mapper	UHGV-0033186_27	1226322.HMPREF1545_00069	127.0	2.53e-37	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-0033186_27	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0033186_27	PF06946	N/A	N/A	N/A	N/A
PHROG	UHGV-0033186_28	phrog_1863	53.0	0.0000000000000025	N/A	unknown function
eggNOG-mapper	UHGV-0033186_28	1226322.HMPREF1545_04027	74.7	1.17e-16	N/A	N/A
PHROG	UHGV-0033186_29	phrog_14030	163.0	0	N/A	unknown function
UniRef90	UHGV-0033186_29	UniRef90_A0A173XSJ1	193.0	0	Autolytic lysozyme	N/A
eggNOG-mapper	UHGV-0033186_29	1121115.AXVN01000051_gene809	186.0	0	NLP P60 protein	N/A
Pfam	UHGV-0033186_29	PF00877	N/A	N/A	NlpC/P60 family	NLPC_P60
Pfam	UHGV-0033186_29	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
COG	UHGV-0033186_29	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
structural_annotation	UHGV-0033186_29	PF01471,PF05382,NF038080,NF033742,COG3409,COG0791	N/A	N/A	N/A	N/A
PHROG	UHGV-0033186_30	phrog_27545	86.9	2.3e-25	N/A	unknown function
UniRef90	UHGV-0033186_30	UniRef90_R6ELD6	70.9	0.00000000000072	Glycosyl hydrolase family 18 family protein	N/A
eggNOG-mapper	UHGV-0033186_30	1122971.BAME01000151_gene6566	102.0	5.98e-25	N/A	N/A
PHROG	UHGV-0033186_31	phrog_355	61.4	1.4e-17	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0033186_31	UniRef90_A0A396KGT7	168.0	0	N/A	N/A
eggNOG-mapper	UHGV-0033186_31	97138.C820_00250	132.0	9.74e-39	N/A	N/A
Pfam	UHGV-0033186_31	PF14359	N/A	N/A	N/A	DUF4406
structural_annotation	UHGV-0033186_31	PF14359,COG3613	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0033186_34	742733.HMPREF9469_05009	58.2	0.000000183	N/A	N/A
structural_annotation	UHGV-0033186_34	PF07210,TIGR03000	N/A	N/A	N/A	N/A
PHROG	UHGV-0033186_35	phrog_13589	163.2	0	N/A	unknown function
eggNOG-mapper	UHGV-0033186_35	742733.HMPREF9469_05009	224.0	0	N/A	N/A
structural_annotation	UHGV-0033186_37	PF10651,NF038186	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0033186_38	PF18614,MF_00085,NF003076	N/A	N/A	N/A	N/A
PHROG	UHGV-0033186_39	phrog_26795	110.0	1.2e-32	N/A	unknown function
eggNOG-mapper	UHGV-0033186_39	796940.HMPREF9628_00133	90.9	9.49e-18	N/A	N/A
structural_annotation	UHGV-0033186_39	PF14594,NF033848,COG4379	N/A	N/A	N/A	N/A
UniRef90	UHGV-0033186_40	UniRef90_A0A3D0W045	186.0	0	Fibronectin type-III domain-containing protein	N/A
eggNOG-mapper	UHGV-0033186_40	1195236.CTER_5103	120.0	9.26e-26	N/A	N/A
structural_annotation	UHGV-0033186_40	PF02010,PF06848,PF19266,MF_04116,NF033679,NF032891,TIGR01633,TIGR04488,COG3401,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0033186_41	phrog_33680	114.9	5.8e-34	N/A	unknown function
UniRef90	UHGV-0033186_41	UniRef90_UPI00098F054B	223.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-0033186_41	1408415.JHXL01000001_gene400	203.0	0	phage tail tape measure protein	N/A
COG	UHGV-0033186_41	COG5280	N/A	N/A	Phage-related minor tail protein	N/A
structural_annotation	UHGV-0033186_41	TIGR01760,COG5280	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0033186_42	PF11836	N/A	N/A	N/A	N/A
COG	UHGV-0033186_43	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0033186_43	PF06488,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-0033186_44	phrog_5	42.6	0.0000000000097	tail completion or Neck1 protein	connector
eggNOG-mapper	UHGV-0033186_44	1203606.HMPREF1526_00974	94.7	1.11e-22	N/A	N/A
structural_annotation	UHGV-0033186_44	TIGR01725	N/A	N/A	N/A	N/A
UniRef90	UHGV-0033186_45	UniRef90_A0A3D4X921	50.8	0.00000871	Phage tail protein	N/A
eggNOG-mapper	UHGV-0033186_45	1203606.HMPREF1526_00975	84.0	1.77e-19	N/A	N/A
structural_annotation	UHGV-0033186_45	PF05657	N/A	N/A	N/A	N/A
PHROG	UHGV-0033186_46	phrog_1951	81.7	6.3e-24	head-tail adaptor	connector
UniRef90	UHGV-0033186_46	UniRef90_UPI0009B2373C	69.7	0.000000000000238	phage head closure protein	N/A
eggNOG-mapper	UHGV-0033186_46	1121428.DESHY_20140___1	66.6	0.000000000000692	head-tail adaptor	N/A
COG	UHGV-0033186_46	COG5614	N/A	N/A	Phage head-tail adaptor	N/A
structural_annotation	UHGV-0033186_46	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0033186_47	phrog_5223	55.8	6.2e-16	neck protein	connector
UniRef90	UHGV-0033186_47	UniRef90_UPI000BEC4770	61.6	0.000000000205	head-tail connector protein	N/A
eggNOG-mapper	UHGV-0033186_47	411465.PEPMIC_00737	61.2	0.0000000000499	N/A	N/A
structural_annotation	UHGV-0033186_47	TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-0033186_48	phrog_10	174.6	0	major head protein	head and packaging
UniRef90	UHGV-0033186_48	UniRef90_UPI0018AA1B7F	357.0	0	phage major capsid protein	N/A
eggNOG-mapper	UHGV-0033186_48	318464.IO99_13750	327.0	0	Phage major capsid protein, HK97 family	N/A
Pfam	UHGV-0033186_48	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0033186_48	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0033186_48	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0033186_48	PF05065,PF19962,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-0033186_49	K01358	133.2	2.7e-39	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-0033186_49	phrog_94	201.3	0	head maturation protease	head and packaging
UniRef90	UHGV-0033186_49	UniRef90_U4R420	257.0	0	ATP-dependent Clp protease proteolytic subunit	N/A
eggNOG-mapper	UHGV-0033186_49	1203606.HMPREF1526_00979	215.0	0	Belongs to the peptidase S14 family	N/A
Pfam	UHGV-0033186_49	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-0033186_49	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-0033186_49	PF00574,MF_00444,NF011091,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-0033186_50	phrog_12	172.2	0	portal protein	head and packaging
UniRef90	UHGV-0033186_50	UniRef90_A0A3B8U1I5	460.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0033186_50	1203606.HMPREF1526_00980	458.0	0	Portal protein	N/A
Pfam	UHGV-0033186_50	PF04860	N/A	N/A	Phage portal protein	Phage_portal
COG	UHGV-0033186_50	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0033186_50	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-0033186_51	phrog_9	400.5	0	terminase large subunit	head and packaging
UniRef90	UHGV-0033186_51	UniRef90_UPI001D07C789	798.0	0	terminase large subunit	N/A
eggNOG-mapper	UHGV-0033186_51	1203606.HMPREF1526_00981	754.0	0	Terminase	N/A
Pfam	UHGV-0033186_51	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0033186_51	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0033186_51	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0033186_51	PF20441,PF03354,MF_04145,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0033186_52	phrog_1066	114.5	5.3e-34	N/A	unknown function
eggNOG-mapper	UHGV-0033186_52	1382358.JHVN01000024_gene1703	108.0	1.09e-28	N/A	N/A
structural_annotation	UHGV-0033186_52	PF05119,TIGR01558	N/A	N/A	N/A	N/A
UniRef90	UHGV-0033186_53	UniRef90_R6M5E4	75.1	5.42e-16	Prophage LambdaBa04 GP54	N/A
eggNOG-mapper	UHGV-0033186_53	1235793.C809_01915	75.5	1.81e-16	HNH endonuclease	N/A
COG	UHGV-0033186_53	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
UniRef90	UHGV-0033186_54	UniRef90_UPI001F232519	70.5	0.0000000000000116	cysteine-rich KTR domain-containing protein	N/A
eggNOG-mapper	UHGV-0033186_54	742738.HMPREF9460_00868	80.5	2.17e-19	Cysteine-rich KTR	N/A
Pfam	UHGV-0033186_54	PF14205	N/A	N/A	Cysteine-rich KTR	Cys_rich_KTR
structural_annotation	UHGV-0033186_54	PF14205	N/A	N/A	N/A	N/A
PHROG	UHGV-0033186_55	phrog_3584	119.5	3e-35	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0033186_55	742738.HMPREF9460_00867	122.0	2.98e-31	N/A	N/A
structural_annotation	UHGV-0033186_55	PF01446,NF041486	N/A	N/A	N/A	N/A
PHROG	UHGV-0033186_60	phrog_10867	56.1	5.8e-16	N/A	unknown function
eggNOG-mapper	UHGV-0033186_63	1007096.BAGW01000033_gene1613	55.5	0.00000422	ParB-like nuclease domain	N/A
COG	UHGV-0033186_63	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A