UHGV-0034760 (vOTU-044390)

Viral Genome: UHGV-0034760

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0034760
vOTU ID	vOTU-044390
Representative Genome?	Yes
Source	Hadza
Original genome ID	Nepal_MoBio_Fiber-Hadza-Nepal_H_9_THA1076JZ__NODE_1385_length_42192_cov_97.421346
Associated BioSample	SAMEA4969198
Viral genome confidence	Confident

Quality assessment
CheckV method	DTR
CheckV completeness	100 (Complete)
Trimmed provirus	No
CheckV viral markers	13
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.981
Virus hallmark genes (geNomad)	5
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	21.69
Jumbo phage	No

Genome content
Genome length (bp)	42,162
GC content	50.08%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	63
CDS density	93%
Average CDS length (bps)	624.57
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0034760_1	phrog_27197	66.1	4.7e-19	N/A	unknown function
eggNOG-mapper	UHGV-0034760_1	886882.PPSC2_p0363	95.9	4.65e-22	regulation of DNA-templated transcription, elongation	N/A
COG	UHGV-0034760_1	COG5164	N/A	N/A	Transcription elongation factor SPT5	N/A
KOfam	UHGV-0034760_2	K01449	52.2	0.000000000000011	cwlJ, sleB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0034760_2	phrog_30550	147.2	5.46506e-44	N/A	unknown function
UniRef90	UHGV-0034760_2	UniRef90_R6CIF0	124.0	2.76e-33	Hydrolase_2 domain-containing protein	N/A
eggNOG-mapper	UHGV-0034760_2	1519439.JPJG01000077_gene920	110.0	8.62e-29	Cell Wall Hydrolase	N/A
Pfam	UHGV-0034760_2	PF07486	N/A	N/A	Cell Wall Hydrolase	Hydrolase_2
structural_annotation	UHGV-0034760_2	PF07486,TIGR02869,COG3773	N/A	N/A	N/A	N/A
KOfam	UHGV-0034760_3	K00390	107.3	1.3e-31	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	N/A
PHROG	UHGV-0034760_3	phrog_424	130.6	1e-38	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0034760_3	UniRef90_UPI0019601A2A	342.0	0	phosphoadenosine phosphosulfate reductase family protein	N/A
eggNOG-mapper	UHGV-0034760_3	1235792.C808_04967	341.0	0	Phosphoadenosine phosphosulfate reductase family	N/A
PADLOC	UHGV-0034760_3	BrxP_00001	76.1	4e-22	BrxP	BREX
Pfam	UHGV-0034760_3	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-0034760_3	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-0034760_3	PF01507,MF_00063,NF010369,COG0175	N/A	N/A	N/A	N/A
PHROG	UHGV-0034760_13	phrog_2245	95.7	4.8e-28	nucleoside triphosphate pyrophosphohydrolase	other
eggNOG-mapper	UHGV-0034760_13	428125.CLOLEP_01814	95.9	4.69e-23	COG NOG14118 non supervised orthologous group	N/A
PHROG	UHGV-0034760_14	phrog_18716	144.5	2.29813e-43	N/A	unknown function
UniRef90	UHGV-0034760_14	UniRef90_A0A1J0GJP7	144.0	2.14959e-42	N/A	N/A
eggNOG-mapper	UHGV-0034760_14	665959.HMPREF1013_00856	114.0	1.79e-31	N/A	N/A
Pfam	UHGV-0034760_14	PF18909	N/A	N/A	dATP/dGTP diphosphohydrolase, N-terminal	dGTP_diPhyd_N
structural_annotation	UHGV-0034760_14	PF18909	N/A	N/A	N/A	N/A
UniRef90	UHGV-0034760_16	UniRef90_A0A3C0NNN3	58.2	0.000000162	HTH psq-type domain-containing protein	N/A
KOfam	UHGV-0034760_17	K06909	135.9	3.5e-40	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0034760_17	phrog_979	140.6	4.59626e-43	terminase large subunit	head and packaging
UniRef90	UHGV-0034760_17	UniRef90_A0A3C0NMI6	635.0	0	Terminase-like family protein	N/A
eggNOG-mapper	UHGV-0034760_17	1410650.JHWL01000003_gene2834	553.0	0	N/A	N/A
Pfam	UHGV-0034760_17	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-0034760_17	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0034760_17	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0034760_18	phrog_156	295.5	0	portal protein	head and packaging
eggNOG-mapper	UHGV-0034760_18	1410650.JHWL01000003_gene2833	498.0	0	N/A	N/A
structural_annotation	UHGV-0034760_18	PF16510,MF_04120,TIGR01538,COG5518	N/A	N/A	N/A	N/A
KOfam	UHGV-0034760_19	K07584	59.6	5.9e-17	N/A	N/A
PHROG	UHGV-0034760_19	phrog_4478	67.2	1.8e-19	peptidase	other
UniRef90	UHGV-0034760_19	UniRef90_UPI001961A1AB	54.7	0.000000215	ribosomal-processing cysteine protease Prp	N/A
eggNOG-mapper	UHGV-0034760_19	1123009.AUID01000013_gene1737	49.3	0.00000541	Cysteine protease Prp	N/A
Pfam	UHGV-0034760_19	PF04327	N/A	N/A	Cysteine protease Prp	Peptidase_Prp
COG	UHGV-0034760_19	COG2868	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0034760_19	PF04327,NF011133,COG2868	N/A	N/A	N/A	N/A
PHROG	UHGV-0034760_20	phrog_13908	177.7	0	N/A	unknown function
eggNOG-mapper	UHGV-0034760_20	1410650.JHWL01000003_gene2831	92.4	1.6e-18	N/A	N/A
PHROG	UHGV-0034760_21	phrog_1357	199.8	0	major head protein	head and packaging
UniRef90	UHGV-0034760_21	UniRef90_A0A2V2CFL5	533.0	0	N4-gp56 family major capsid protein	N/A
eggNOG-mapper	UHGV-0034760_21	1410650.JHWL01000003_gene2830	265.0	0	N/A	N/A
NCBIFam	UHGV-0034760_21	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-0034760_21	PF13252,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0034760_22	phrog_15239	40.8	0.000000000033	N/A	unknown function
PHROG	UHGV-0034760_23	phrog_12105	104.5	7e-31	N/A	unknown function
eggNOG-mapper	UHGV-0034760_23	1519439.JPJG01000060_gene1891	62.8	0.0000000000621	N/A	N/A
PHROG	UHGV-0034760_24	phrog_511	207.7	0	internal virion protein	head and packaging
eggNOG-mapper	UHGV-0034760_24	1226322.HMPREF1545_00785	249.0	0	N/A	N/A
structural_annotation	UHGV-0034760_24	PF11134,TIGR03300,NF038126,COG1520	N/A	N/A	N/A	N/A
UniRef90	UHGV-0034760_26	UniRef90_R7AZF7	111.0	1.56e-23	N/A	N/A
eggNOG-mapper	UHGV-0034760_26	1410650.JHWL01000003_gene2815	113.0	4.65e-25	N/A	N/A
PHROG	UHGV-0034760_27	phrog_22978	470.1	0	N/A	unknown function
UniRef90	UHGV-0034760_27	UniRef90_R5G452	649.0	0	PBECR5 domain-containing protein	N/A
eggNOG-mapper	UHGV-0034760_27	1410650.JHWL01000003_gene2814	513.0	0	N/A	N/A
Pfam	UHGV-0034760_27	PF18819	N/A	N/A	Phage MuF-C-terminal domain	MuF_C
Pfam	UHGV-0034760_27	PF18814	N/A	N/A	phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease5	PBECR5
PHROG	UHGV-0034760_28	phrog_15594	96.6	1.4e-28	N/A	unknown function
eggNOG-mapper	UHGV-0034760_28	1118055.CAGU01000013_gene763	68.6	0.0000000000000851	N/A	N/A
structural_annotation	UHGV-0034760_28	PF16640,TIGR04488	N/A	N/A	N/A	N/A
PHROG	UHGV-0034760_30	phrog_19111	43.4	1.1e-21	N/A	unknown function
eggNOG-mapper	UHGV-0034760_30	411471.SUBVAR_06929	222.0	0	ATPase involved in DNA repair	N/A
COG	UHGV-0034760_30	COG0419	N/A	N/A	DNA repair exonuclease SbcCD ATPase subunit	N/A
PHROG	UHGV-0034760_32	phrog_31538	49.5	0.000000000000084	N/A	unknown function
PHROG	UHGV-0034760_33	phrog_13589	82.8	1.8e-24	N/A	unknown function
eggNOG-mapper	UHGV-0034760_33	742733.HMPREF9469_05009	111.0	1.24e-28	N/A	N/A
PHROG	UHGV-0034760_34	phrog_21357	55.7	5.2e-16	endolysin	lysis
UniRef90	UHGV-0034760_34	UniRef90_A0A6N2TR83	85.9	1.62e-16	Peptidase C51 domain-containing protein	N/A
eggNOG-mapper	UHGV-0034760_34	1007096.BAGW01000022_gene2648	73.9	0.000000000000458	CHAP domain	N/A
Pfam	UHGV-0034760_34	PF05257	N/A	N/A	CHAP domain	CHAP
COG	UHGV-0034760_34	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
structural_annotation	UHGV-0034760_34	TIGR02594,COG3738	N/A	N/A	N/A	N/A
PHROG	UHGV-0034760_35	phrog_1863	66.9	1.8e-19	N/A	unknown function
eggNOG-mapper	UHGV-0034760_35	748224.HMPREF9436_01412	94.0	2.16e-24	N/A	N/A
PHROG	UHGV-0034760_36	phrog_10091	109.8	1.8e-32	holin	lysis
UniRef90	UHGV-0034760_36	UniRef90_A0A1Y4RHF4	128.0	4.36e-37	Phage holin	N/A
eggNOG-mapper	UHGV-0034760_36	445975.COLSTE_02144	114.0	2.25e-32	Bacteriophage holin	N/A
Pfam	UHGV-0034760_36	PF04531	N/A	N/A	Bacteriophage holin	Phage_holin_1
NCBIFam	UHGV-0034760_36	TIGR01598.1	N/A	N/A	phage holin	N/A
COG	UHGV-0034760_36	COG5546	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0034760_36	COG5546	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0034760_37	PF16509,MF_00245,NF001066,COG2739	N/A	N/A	N/A	N/A
PHROG	UHGV-0034760_38	phrog_3754	101.2	9.1e-30	N/A	unknown function
eggNOG-mapper	UHGV-0034760_38	476272.RUMHYD_01764	147.0	2.8026e-44	N/A	N/A
PHROG	UHGV-0034760_39	phrog_21718	97.8	8.4e-29	N/A	unknown function
eggNOG-mapper	UHGV-0034760_39	397290.C810_05210	95.1	5.07e-23	N/A	N/A
PHROG	UHGV-0034760_40	phrog_22984	75.7	4.8e-22	N/A	unknown function
PHROG	UHGV-0034760_41	phrog_16490	148.1	5.46506e-44	N/A	unknown function
eggNOG-mapper	UHGV-0034760_41	1408437.JNJN01000043_gene803	145.0	3.13e-40	N/A	N/A
PHROG	UHGV-0034760_42	phrog_20016	192.3	0	N/A	unknown function
UniRef90	UHGV-0034760_42	UniRef90_A0A285PT46	198.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-0034760_42	1226322.HMPREF1545_00077	167.0	0	N/A	N/A
structural_annotation	UHGV-0034760_42	PF18573,NF033147	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0034760_43	PF12510	N/A	N/A	N/A	N/A
KOfam	UHGV-0034760_44	K14059	153.3	2.8026e-45	int; integrase	N/A
PHROG	UHGV-0034760_44	phrog_1	155.2	0	integrase	integration and excision
UniRef90	UHGV-0034760_44	UniRef90_R6I1Y0	332.0	0	Site-specific recombinase XerD	N/A
eggNOG-mapper	UHGV-0034760_44	1384066.JAGT01000001_gene153	112.0	1.34e-25	Phage integrase family	N/A
Pfam	UHGV-0034760_44	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0034760_44	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0034760_44	PF00589,PF12167,MF_02055,NF040815,COG4974	N/A	N/A	N/A	N/A
UniRef90	UHGV-0034760_45	UniRef90_A0A8D9UHA6	69.3	0.0000000000303	Helix-turn-helix XRE-family like protein	N/A
COG	UHGV-0034760_45	COG3620	N/A	N/A	Predicted transcriptional regulator, contains an XRE-type HTH domain (archaeal members contain CBS pair)	N/A
structural_annotation	UHGV-0034760_45	PF13443,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0034760_48	1392493.JIAB01000001_gene1404	57.4	0.0000000113	repeat protein	N/A
COG	UHGV-0034760_48	COG5263	N/A	N/A	Glucan-binding domain (YG repeat)	N/A
eggNOG-mapper	UHGV-0034760_51	1378168.N510_01712	52.0	0.00000798	N/A	N/A
structural_annotation	UHGV-0034760_51	PF01381,NF041951,COG3655	N/A	N/A	N/A	N/A
KOfam	UHGV-0034760_53	K22300	56.2	7.5e-16	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0034760_53	phrog_8	43.2	0.0000000000086	transcriptional regulator	transcription regulation
UniRef90	UHGV-0034760_53	UniRef90_A0A810PZI0	73.6	5.28e-16	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0034760_53	693746.OBV_25500	62.8	0.00000000000172	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-0034760_53	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0034760_53	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0034760_53	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0034760_54	PF21291,TIGR03070,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-0034760_57	phrog_253	101.5	8.3e-30	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0034760_57	UniRef90_A0A315ZWQ7	93.2	4.06e-21	Viral Gp157 protein	N/A
eggNOG-mapper	UHGV-0034760_57	1410670.JHXF01000015_gene2268	85.1	9.35e-19	Siphovirus Gp157	N/A
Pfam	UHGV-0034760_57	PF05565	N/A	N/A	Siphovirus Gp157	Sipho_Gp157
structural_annotation	UHGV-0034760_57	PF05565	N/A	N/A	N/A	N/A
PHROG	UHGV-0034760_58	phrog_155	79.7	4.2e-23	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0034760_58	UniRef90_UPI0018AC33A4	189.0	0	ERF family protein	N/A
eggNOG-mapper	UHGV-0034760_58	1497679.EP56_08440	76.6	0.000000000000032	ERF superfamily	N/A
Pfam	UHGV-0034760_58	PF04404	N/A	N/A	ERF superfamily	ERF
structural_annotation	UHGV-0034760_58	PF04404,COG4712	N/A	N/A	N/A	N/A
PHROG	UHGV-0034760_59	phrog_72	46.6	0.00000000000029	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0034760_59	UniRef90_A0A2Z4Q9W9	106.0	6.62e-26	NinB	N/A
eggNOG-mapper	UHGV-0034760_59	445972.ANACOL_01825	77.8	0.00000000000000118	N/A	N/A
structural_annotation	UHGV-0034760_59	PF05772	N/A	N/A	N/A	N/A
PHROG	UHGV-0034760_60	phrog_7566	89.2	2.9e-26	N/A	unknown function
eggNOG-mapper	UHGV-0034760_60	508419.F8J187_9CAUD	103.0	1.32e-27	N/A	N/A
KOfam	UHGV-0034760_61	K03111	120.5	2.1e-35	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0034760_61	phrog_44	120.4	1.5e-35	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0034760_61	UniRef90_R6IDK3	137.0	7.37e-39	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0034760_61	1235797.C816_01960	126.0	1.63e-35	Single-strand binding protein family	N/A
Pfam	UHGV-0034760_61	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0034760_61	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0034760_61	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0034760_61	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0034760_61	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0034760_62	phrog_270	99.8	3.4e-29	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0034760_62	203119.Cthe_2466	159.0	3.92364e-44	N/A	N/A
structural_annotation	UHGV-0034760_62	PF01475,NF006999,COG0735	N/A	N/A	N/A	N/A
PHROG	UHGV-0034760_63	phrog_4433	80.0	3.2e-23	N/A	unknown function
eggNOG-mapper	UHGV-0034760_63	445970.ALIPUT_01592	104.0	4.02e-24	DNA-templated transcription, initiation	N/A
COG	UHGV-0034760_63	COG1595	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	N/A