UHGV-0036964 (vOTU-060267)

Viral Genome: UHGV-0036964

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0036964
vOTU ID	vOTU-060267
Representative Genome?	Yes
Source	GPD
Original genome ID	ivig_2200
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	99.9 (High-quality)
Trimmed provirus	No
CheckV viral markers	17
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.976
Virus hallmark genes (geNomad)	9
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	24.4
Jumbo phage	No

Genome content
Genome length (bp)	38,928
GC content	44.06%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	57
CDS density	89%
Average CDS length (bps)	608.26
Total tRNA genes	1
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 99.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0036964_1	K14059	185.3	0	int; integrase	N/A
PHROG	UHGV-0036964_1	phrog_1	144.8	6.7963e-43	integrase	integration and excision
UniRef90	UHGV-0036964_1	UniRef90_A0A417PS32	801.0	0	Site-specific integrase	N/A
eggNOG-mapper	UHGV-0036964_1	642492.Clole_1823	114.0	1.97e-25	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0036964_1	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-0036964_1	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0036964_1	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0036964_1	PF00589,MF_01808,TIGR02225,NF041908,COG4974,COG3422	N/A	N/A	N/A	N/A
KOfam	UHGV-0036964_2	K07171	56.5	1.4e-17	mazF, ndoA, chpA; mRNA interferase MazF [EC:3.1.-.-]	N/A
PHROG	UHGV-0036964_2	phrog_1412	156.9	0	antitoxin mazE-like	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0036964_2	UniRef90_UPI001BC64A01	400.0	0	Type II toxin-antitoxin system PemK/MazF family toxin	N/A
eggNOG-mapper	UHGV-0036964_2	1235792.C808_05257	185.0	0	Toxic component of a toxin-antitoxin (TA) module	N/A
Pfam	UHGV-0036964_2	PF02452	N/A	N/A	PemK-like, MazF-like toxin of type II toxin-antitoxin system	PemK_toxin
COG	UHGV-0036964_2	COG2337	N/A	N/A	mRNA-degrading endonuclease MazF, toxin component of the MazEF toxin-antitoxin module	N/A
structural_annotation	UHGV-0036964_2	PF02452,NF007386,COG2337	N/A	N/A	N/A	N/A
PHROG	UHGV-0036964_3	phrog_87	79.9	2.1e-23	metallo-protease	other
UniRef90	UHGV-0036964_3	UniRef90_F7JQG6	194.0	0	Peptidase_M78 domain-containing protein	N/A
eggNOG-mapper	UHGV-0036964_3	1256908.HMPREF0373_00642	216.0	0	Zn peptidase	N/A
COG	UHGV-0036964_3	COG2856	N/A	N/A	Zn-dependent peptidase ImmA, M78 family	N/A
structural_annotation	UHGV-0036964_3	PF06114,COG2856	N/A	N/A	N/A	N/A
UniRef90	UHGV-0036964_4	UniRef90_A0A417PRM3	336.0	0	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0036964_4	1235798.C817_04757	169.0	0	N/A	N/A
Pfam	UHGV-0036964_4	PF13560	N/A	N/A	Helix-turn-helix domain	HTH_31
COG	UHGV-0036964_4	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
UniRef90	UHGV-0036964_5	UniRef90_UPI001D096ABA	86.3	1.82e-20	helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-0036964_5	1235798.C817_04758	88.6	2.55e-22	N/A	N/A
structural_annotation	UHGV-0036964_5	PF13443,NF010465,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-0036964_6	phrog_31760	65.9	3.7e-19	N/A	unknown function
eggNOG-mapper	UHGV-0036964_13	883156.HMPREF9282_01215	58.2	0.0000000211	N/A	N/A
structural_annotation	UHGV-0036964_13	NF040556	N/A	N/A	N/A	N/A
UniRef90	UHGV-0036964_15	UniRef90_A0A417PRJ7	110.0	8.35e-31	DNA-binding protein	N/A
KOfam	UHGV-0036964_16	K01449	80.2	2.7e-23	cwlJ, sleB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0036964_16	phrog_17417	116.9	1.5e-34	N/A	unknown function
UniRef90	UHGV-0036964_16	UniRef90_A0A3R6XAL2	316.0	0	Cell wall hydrolase	N/A
eggNOG-mapper	UHGV-0036964_16	411460.RUMTOR_02030	106.0	4.72e-27	Cell Wall Hydrolase	N/A
Pfam	UHGV-0036964_16	PF07486	N/A	N/A	Cell Wall Hydrolase	Hydrolase_2
COG	UHGV-0036964_16	COG3773	N/A	N/A	Cell wall hydrolase CwlJ, involved in spore germination	N/A
PHROG	UHGV-0036964_18	phrog_3584	289.0	0	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0036964_18	UniRef90_A0A4P8IFK4	357.0	0	N/A	N/A
eggNOG-mapper	UHGV-0036964_18	742741.HMPREF9475_00404	338.0	0	N/A	N/A
structural_annotation	UHGV-0036964_18	PF21578,NF041486	N/A	N/A	N/A	N/A
KOfam	UHGV-0036964_19	K03469	73.3	4.2e-21	rnhA, RNASEH1; ribonuclease HI [EC:3.1.26.4]	N/A
PHROG	UHGV-0036964_19	phrog_531	77.8	1.4e-22	Rnase H	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0036964_19	UniRef90_A0A3R6V218	307.0	0	RNase H type-1 domain-containing protein	N/A
eggNOG-mapper	UHGV-0036964_19	1232453.BAIF02000027_gene4200	82.0	7.09e-18	RNA-DNA hybrid ribonuclease activity	N/A
Pfam	UHGV-0036964_19	PF00075	N/A	N/A	RNase H	RNase_H
COG	UHGV-0036964_19	COG0328	N/A	N/A	Ribonuclease HI	N/A
structural_annotation	UHGV-0036964_19	PF00075,MF_00042,NF001236,COG0328	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0036964_20	1235792.C808_00065	215.0	0	N/A	N/A
PHROG	UHGV-0036964_21	phrog_8470	346.4	0	N/A	unknown function
UniRef90	UHGV-0036964_21	UniRef90_UPI001D086F83	848.0	0	PcfJ domain-containing protein	N/A
eggNOG-mapper	UHGV-0036964_21	97139.C824_00039	854.0	0	PcfJ-like protein	N/A
Pfam	UHGV-0036964_21	PF14284	N/A	N/A	PcfJ-like protein	PcfJ
structural_annotation	UHGV-0036964_21	PF14284	N/A	N/A	N/A	N/A
PHROG	UHGV-0036964_22	phrog_15077	69.7	2.6e-21	N/A	unknown function
UniRef90	UHGV-0036964_22	UniRef90_A5ZPN2	175.0	0	N/A	N/A
eggNOG-mapper	UHGV-0036964_22	411459.RUMOBE_00949	175.0	0	N/A	N/A
COG	UHGV-0036964_22	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
PHROG	UHGV-0036964_23	phrog_7566	110.0	8.6e-33	N/A	unknown function
eggNOG-mapper	UHGV-0036964_23	411902.CLOBOL_05695	75.9	2.52e-16	N/A	N/A
PHROG	UHGV-0036964_24	phrog_26165	45.1	0.0000000000016	N/A	unknown function
PHROG	UHGV-0036964_28	phrog_36	49.1	0.000000000000089	transcriptional regulator	transcription regulation
UniRef90	UHGV-0036964_28	UniRef90_R6ZAS5	88.2	7.99e-19	GED domain-containing protein	N/A
eggNOG-mapper	UHGV-0036964_28	476272.RUMHYD_02841	94.4	5.57e-22	N/A	N/A
KOfam	UHGV-0036964_29	K04763	145.7	4.59626e-43	xerD; integrase/recombinase XerD	N/A
PHROG	UHGV-0036964_29	phrog_1	117.8	1.2e-34	integrase	integration and excision
UniRef90	UHGV-0036964_29	UniRef90_A0A351URM1	322.0	0	Tyr recombinase domain-containing protein (Fragment)	N/A
eggNOG-mapper	UHGV-0036964_29	610130.Closa_0719	207.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0036964_29	PF13495	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_4
Pfam	UHGV-0036964_29	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0036964_29	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-0036964_29	PF00589,PF02899,MF_01807,TIGR02224,COG4973	N/A	N/A	N/A	N/A
KOfam	UHGV-0036964_30	K07474	148.6	6.16571e-44	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-0036964_30	phrog_51	138.2	4.60004e-41	terminase small subunit	head and packaging
UniRef90	UHGV-0036964_30	UniRef90_A0A417PRW3	313.0	0	Terminase small subunit	N/A
eggNOG-mapper	UHGV-0036964_30	476272.RUMHYD_02844	189.0	0	Terminase Small Subunit	N/A
Pfam	UHGV-0036964_30	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-0036964_30	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0036964_30	PF03592,COG3728	N/A	N/A	N/A	N/A
KOfam	UHGV-0036964_31	K06909	92.3	6.4e-27	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0036964_31	phrog_2	82.0	1e-23	terminase large subunit	head and packaging
UniRef90	UHGV-0036964_31	UniRef90_A0A417PRX3	943.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0036964_31	742740.HMPREF9474_03500	773.0	0	Phage terminase, large subunit, PBSX family	N/A
COG	UHGV-0036964_31	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0036964_31	PF03237,PF17289,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0036964_32	phrog_533	292.2	0	portal protein	head and packaging
UniRef90	UHGV-0036964_32	UniRef90_A0A417PS46	1048.0	0	Capsid protein	N/A
eggNOG-mapper	UHGV-0036964_32	742740.HMPREF9474_03501	760.0	0	N/A	N/A
structural_annotation	UHGV-0036964_32	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0036964_33	phrog_25639	132.9	5.1e-40	N/A	unknown function
eggNOG-mapper	UHGV-0036964_33	742740.HMPREF9474_03502	100.0	6.07e-27	N/A	N/A
PHROG	UHGV-0036964_34	phrog_581	244.2	0	minor head protein	head and packaging
UniRef90	UHGV-0036964_34	UniRef90_A0A417PTN7	1078.0	0	Minor capsid protein	N/A
eggNOG-mapper	UHGV-0036964_34	742740.HMPREF9474_03503	534.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-0036964_34	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
Pfam	UHGV-0036964_34	PF18451	N/A	N/A	Contact-dependent growth inhibition CdiA C-terminal domain	CdiA_C
COG	UHGV-0036964_34	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0036964_34	PF06152,PF03496,MF_04139,NF040688	N/A	N/A	N/A	N/A
PHROG	UHGV-0036964_35	phrog_2303	135.2	4.9e-40	head scaffolding protein	head and packaging
eggNOG-mapper	UHGV-0036964_35	1304866.K413DRAFT_0806	209.0	0	N/A	N/A
PHROG	UHGV-0036964_36	phrog_422	340.1	0	major head protein	head and packaging
UniRef90	UHGV-0036964_36	UniRef90_A0A3R6SY23	603.0	0	Capsid protein	N/A
eggNOG-mapper	UHGV-0036964_36	33035.JPJF01000093_gene2252	463.0	0	N/A	N/A
structural_annotation	UHGV-0036964_36	PF19821,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0036964_37	phrog_1378	72.9	3.3e-21	N/A	unknown function
eggNOG-mapper	UHGV-0036964_37	1280692.AUJL01000027_gene2159	69.7	0.0000000000000131	N/A	N/A
PHROG	UHGV-0036964_38	phrog_541	86.8	2e-25	head-tail adaptor	connector
eggNOG-mapper	UHGV-0036964_38	1298920.KI911353_gene4848	195.0	0	N/A	N/A
PHROG	UHGV-0036964_39	phrog_8710	134.0	4.39999e-40	N/A	unknown function
eggNOG-mapper	UHGV-0036964_39	742740.HMPREF9474_03508	177.0	0	N/A	N/A
structural_annotation	UHGV-0036964_39	PF10665,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0036964_40	phrog_556	61.9	9.9e-18	minor head protein	head and packaging
eggNOG-mapper	UHGV-0036964_40	742740.HMPREF9474_03509	200.0	0	N/A	N/A
PHROG	UHGV-0036964_41	phrog_2595	89.7	2.6e-26	head-tail connector protein	connector
UniRef90	UHGV-0036964_41	UniRef90_UPI001D068DAC	194.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0036964_41	742740.HMPREF9474_03510	178.0	0	N/A	N/A
Pfam	UHGV-0036964_41	PF12691	N/A	N/A	Bacteriophage minor capsid protein	Minor_capsid_3
structural_annotation	UHGV-0036964_41	PF12691,COG5003	N/A	N/A	N/A	N/A
PHROG	UHGV-0036964_42	phrog_820	131.0	5.3e-39	major tail protein	tail
eggNOG-mapper	UHGV-0036964_42	742740.HMPREF9474_03511	251.0	0	domain, Protein	N/A
COG	UHGV-0036964_42	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0036964_42	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0036964_43	phrog_8300	95.3	4.2e-28	N/A	unknown function
eggNOG-mapper	UHGV-0036964_43	742740.HMPREF9474_03512	127.0	7.01e-37	N/A	N/A
structural_annotation	UHGV-0036964_43	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0036964_44	phrog_8355	101.8	2.4e-30	N/A	unknown function
UniRef90	UHGV-0036964_44	UniRef90_UPI001A9A799B	139.0	6.70998e-41	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-0036964_44	742740.HMPREF9474_03513	142.0	6.89439e-43	N/A	N/A
Pfam	UHGV-0036964_44	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0036964_44	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0036964_45	phrog_1535	478.0	0	tail length tape measure protein	tail
UniRef90	UHGV-0036964_45	UniRef90_A0A174SV65	809.0	0	Phage-like protein	N/A
eggNOG-mapper	UHGV-0036964_45	742740.HMPREF9474_03514	720.0	0	tape measure	N/A
COG	UHGV-0036964_45	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-0036964_45	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0036964_46	phrog_1194	65.7	6.6e-19	N/A	unknown function
eggNOG-mapper	UHGV-0036964_46	742740.HMPREF9474_03515	159.0	0	N/A	N/A
structural_annotation	UHGV-0036964_46	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0036964_47	phrog_13879	373.1	0	N/A	unknown function
eggNOG-mapper	UHGV-0036964_47	742740.HMPREF9474_03516	873.0	0	N/A	N/A
structural_annotation	UHGV-0036964_47	PF03256,PF16466,PF13550,MF_00813,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-0036964_48	phrog_18725	60.2	3.9e-17	N/A	unknown function
eggNOG-mapper	UHGV-0036964_48	585501.HMPREF6123_0822	126.0	1.23e-35	N/A	N/A
eggNOG-mapper	UHGV-0036964_49	742740.HMPREF9474_03518	63.2	0.000000000212	N/A	N/A
PHROG	UHGV-0036964_51	phrog_9428	133.7	4.2e-40	N/A	unknown function
UniRef90	UHGV-0036964_51	UniRef90_A0A417PRQ0	161.0	0	Serine/threonine protein kinase	N/A
eggNOG-mapper	UHGV-0036964_51	411470.RUMGNA_00253	107.0	8.42e-29	N/A	N/A
PHROG	UHGV-0036964_52	phrog_1048	178.4	0	N/A	unknown function
UniRef90	UHGV-0036964_52	UniRef90_A0A417PRP3	345.0	0	N/A	N/A
eggNOG-mapper	UHGV-0036964_52	457412.RSAG_01107	301.0	0	N/A	N/A
Pfam	UHGV-0036964_52	PF11195	N/A	N/A	N/A	DUF2829
dbAPIS	UHGV-0036964_52	APIS029	N/A	N/A	Tad2 is a "sponge" that sequesters the immune signaling molecules produced by Thoeris TIR-domain proteins in response to phage.	N/A
structural_annotation	UHGV-0036964_52	PF11195	N/A	N/A	N/A	N/A
PHROG	UHGV-0036964_53	phrog_355	49.3	0.000000000000077	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0036964_53	UniRef90_UPI000E473058	163.0	0	N/A	N/A
eggNOG-mapper	UHGV-0036964_53	397290.C810_05229	156.0	0	N/A	N/A
structural_annotation	UHGV-0036964_53	PF14359	N/A	N/A	N/A	N/A
PHROG	UHGV-0036964_54	phrog_918	128.6	1.4e-38	N/A	unknown function
UniRef90	UHGV-0036964_54	UniRef90_UPI00115A7D93	152.0	0	N/A	N/A
eggNOG-mapper	UHGV-0036964_54	1140001.I571_01827	131.0	6.45e-39	N/A	N/A
Pfam	UHGV-0036964_54	PF19791	N/A	N/A	N/A	DUF6275
structural_annotation	UHGV-0036964_54	PF19791	N/A	N/A	N/A	N/A
PHROG	UHGV-0036964_55	phrog_18218	139.2	9.99967e-42	N/A	unknown function
UniRef90	UHGV-0036964_55	UniRef90_A0A3R6VY16	204.0	0	Ribonuclease	N/A
eggNOG-mapper	UHGV-0036964_55	411459.RUMOBE_00910	145.0	4.90454e-44	N/A	N/A
KOfam	UHGV-0036964_56	K07273	184.2	0	acm; lysozyme	N/A
PHROG	UHGV-0036964_56	phrog_291	146.6	2.10195e-43	endolysin	lysis
UniRef90	UHGV-0036964_56	UniRef90_UPI001EE918BB	276.0	0	peptidoglycan-binding protein	N/A
eggNOG-mapper	UHGV-0036964_56	476272.RUMHYD_02876	199.0	0	autolytic lysozime (1,4-beta-N-acetylmuramidase), family 25 of glycosyl hydrolases	N/A
Pfam	UHGV-0036964_56	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-0036964_56	COG3409	N/A	N/A	Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases	N/A
structural_annotation	UHGV-0036964_56	PF01183,PF08230,COG3757	N/A	N/A	N/A	N/A