UHGV-0037207 (vOTU-149940)

Viral Genome: UHGV-0037207

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0037207
vOTU ID	vOTU-149940
Representative Genome?	Yes
Source	Hadza
Original genome ID	Nepal_MoBio_Fiber-Hadza-Nepal_B_7_THA1072JZ__NODE_3539_length_18792_cov_54.171413
Associated BioSample	SAMEA4969195
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	51.13 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	7
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.982
Virus hallmark genes (geNomad)	4
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	17.7
Jumbo phage	No

Genome content
Genome length (bp)	18,792
GC content	59.14%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	37
CDS density	90%
Average CDS length (bps)	459.49
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 51.13)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
COG	UHGV-0037207_1	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
PHROG	UHGV-0037207_2	phrog_12	172.6	0	portal protein	head and packaging
UniRef90	UHGV-0037207_2	UniRef90_R8W4B0	498.0	0	HK97 family phage portal protein	N/A
eggNOG-mapper	UHGV-0037207_2	1203606.HMPREF1526_00980	498.0	0	Portal protein	N/A
Pfam	UHGV-0037207_2	PF04860	N/A	N/A	Phage portal protein	Phage_portal
COG	UHGV-0037207_2	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0037207_2	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-0037207_3	phrog_9	374.6	0	terminase large subunit	head and packaging
UniRef90	UHGV-0037207_3	UniRef90_A0A1Y3W5R1	781.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0037207_3	1203606.HMPREF1526_00981	727.0	0	Terminase	N/A
Pfam	UHGV-0037207_3	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0037207_3	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0037207_3	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0037207_3	PF20441,PF03354,MF_04145,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0037207_4	phrog_1066	130.2	7.1e-39	N/A	unknown function
eggNOG-mapper	UHGV-0037207_4	1341151.ASZU01000004_gene265	122.0	3.78e-34	N/A	N/A
structural_annotation	UHGV-0037207_4	PF05119,TIGR01558	N/A	N/A	N/A	N/A
PHROG	UHGV-0037207_5	phrog_119	48.4	0.00000000000012	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0037207_5	UniRef90_A0A174XSZ8	124.0	8.33e-35	Prophage LambdaBa04, GP54	N/A
eggNOG-mapper	UHGV-0037207_5	1235793.C809_01915	120.0	2.46e-33	HNH endonuclease	N/A
Pfam	UHGV-0037207_5	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-0037207_5	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
eggNOG-mapper	UHGV-0037207_6	1297617.JPJD01000059_gene2640	84.7	3.61e-19	N/A	N/A
structural_annotation	UHGV-0037207_6	PF06530,TIGR01636	N/A	N/A	N/A	N/A
PHROG	UHGV-0037207_7	phrog_3584	114.8	7.1e-34	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0037207_7	537013.CLOSTMETH_02141	72.4	0.000000000000935	N/A	N/A
structural_annotation	UHGV-0037207_7	PF21578,MF_00360	N/A	N/A	N/A	N/A
PHROG	UHGV-0037207_12	phrog_374	52.4	0.00000000000001	HNH endonuclease	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0037207_12	387344.LVIS_0713	60.5	0.00000000162	N/A	N/A
PHROG	UHGV-0037207_13	phrog_190	95.3	6.5e-28	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0037207_13	UniRef90_UPI0006C2AC63	128.0	4.34e-35	N/A	N/A
eggNOG-mapper	UHGV-0037207_13	1226322.HMPREF1545_00295	115.0	2.15e-30	N/A	N/A
Pfam	UHGV-0037207_13	PF06356	N/A	N/A	N/A	DUF1064
structural_annotation	UHGV-0037207_13	PF06356	N/A	N/A	N/A	N/A
PHROG	UHGV-0037207_17	phrog_3136	134.8	2.9e-40	N/A	unknown function
UniRef90	UHGV-0037207_17	UniRef90_A0A3D0HBD2	119.0	1.76e-31	ASCH domain-containing protein	N/A
eggNOG-mapper	UHGV-0037207_17	1123239.KB898644_gene10	56.2	0.000000045	ASCH	N/A
Pfam	UHGV-0037207_17	PF04266	N/A	N/A	ASCH domain	ASCH
COG	UHGV-0037207_17	COG4933	N/A	N/A	Predicted transcriptional regulator, contains an HTH and PUA-like domains	N/A
structural_annotation	UHGV-0037207_17	PF04266,MF_00684,NF008917,COG4933	N/A	N/A	N/A	N/A
UniRef90	UHGV-0037207_18	UniRef90_UPI001C10265C	95.9	3.12e-23	N/A	N/A
Pfam	UHGV-0037207_18	PF04448	N/A	N/A	N/A	DUF551
structural_annotation	UHGV-0037207_18	NF041588	N/A	N/A	N/A	N/A
KOfam	UHGV-0037207_19	K00390	107.2	1.7e-31	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	N/A
PHROG	UHGV-0037207_19	phrog_424	119.7	2.3e-35	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0037207_19	UniRef90_UPI001D087498	429.0	0	phosphoadenosine phosphosulfate reductase family protein	N/A
eggNOG-mapper	UHGV-0037207_19	1408437.JNJN01000032_gene2312	332.0	0	Phosphoadenosine phosphosulfate reductase	N/A
PADLOC	UHGV-0037207_19	BrxP_00001	68.5	6.6e-20	BrxP	BREX
Pfam	UHGV-0037207_19	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-0037207_19	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-0037207_19	PF01507,MF_00063,NF010369,COG0175	N/A	N/A	N/A	N/A
KOfam	UHGV-0037207_20	K00558	45.7	0.00000000000052	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-0037207_20	phrog_757	132.9	1.6e-39	DNA methyltransferase	other
UniRef90	UHGV-0037207_20	UniRef90_A0A1C5WFL3	399.0	0	DNA (cytosine-5-)-methyltransferase	N/A
eggNOG-mapper	UHGV-0037207_20	622312.ROSEINA2194_01264	376.0	0	C-5 cytosine-specific DNA methylase	N/A
Pfam	UHGV-0037207_20	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
COG	UHGV-0037207_20	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-0037207_20	PF00145,TIGR00675,COG0270	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0037207_24	PF05082	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0037207_25	NF041247	N/A	N/A	N/A	N/A
KOfam	UHGV-0037207_29	K22300	71.4	1.8e-20	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0037207_29	phrog_8	63.4	3.9e-18	transcriptional regulator	transcription regulation
UniRef90	UHGV-0037207_29	UniRef90_A0A2U1BEG8	127.0	1.62e-35	Helix-turn-helix protein	N/A
eggNOG-mapper	UHGV-0037207_29	903814.ELI_1263	115.0	1.27e-31	Helix-turn-helix domain	N/A
Pfam	UHGV-0037207_29	PF12844	N/A	N/A	Helix-turn-helix domain	HTH_19
COG	UHGV-0037207_29	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0037207_29	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0037207_31	1410628.JNKS01000020_gene1647	62.0	0.00000000483	DNA/RNA non-specific endonuclease	N/A
COG	UHGV-0037207_31	COG2169	N/A	N/A	Methylphosphotriester-DNA--protein-cysteine methyltransferase (N-terminal fragment of Ada), contains Zn-binding and two AraC-type DNA-binding domains	N/A
structural_annotation	UHGV-0037207_31	PF02805	N/A	N/A	N/A	N/A
PHROG	UHGV-0037207_32	phrog_10292	75.3	3.2e-22	N/A	unknown function
UniRef90	UHGV-0037207_32	UniRef90_UPI00101CA94E	98.6	9.16e-24	TM2 domain-containing protein	N/A
eggNOG-mapper	UHGV-0037207_32	1198452.Jab_1c20720	82.4	2.94e-18	TM2 domain	N/A
Pfam	UHGV-0037207_32	PF13240	N/A	N/A	zinc-ribbon domain	zinc_ribbon_2
Pfam	UHGV-0037207_32	PF05154	N/A	N/A	TM2 domain	TM2
COG	UHGV-0037207_32	COG2314	N/A	N/A	N/A	N/A
Pfam	UHGV-0037207_33	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0037207_33	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0037207_33	PF12844,MF_00535,NF041677,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0037207_34	K06400	248.0	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-0037207_34	phrog_95	261.5	0	integrase	integration and excision
UniRef90	UHGV-0037207_34	UniRef90_G9YSD9	413.0	0	Resolvase protein	N/A
eggNOG-mapper	UHGV-0037207_34	1408437.JNJN01000002_gene1420	395.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-0037207_34	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-0037207_34	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-0037207_34	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-0037207_34	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0037207_34	PF07508,PF00239,NF041201,COG1961	N/A	N/A	N/A	N/A
UniRef90	UHGV-0037207_35	UniRef90_A0A8F0WD75	76.3	0.0000000000000292	RNA polymerase sigma factor/Ubiquitin-like protein	N/A
eggNOG-mapper	UHGV-0037207_35	1378168.N510_03079	70.9	0.00000000000144	N/A	N/A
structural_annotation	UHGV-0037207_36	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-0037207_37	phrog_16490	48.5	0.00000000000017	N/A	unknown function
eggNOG-mapper	UHGV-0037207_37	641112.ACOK01000103_gene525	54.3	0.00000178	N/A	N/A