UHGV-0037219 (vOTU-021972)

Viral Genome: UHGV-0037219

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0037219
vOTU ID	vOTU-021972
Representative Genome?	Yes
Source	Hadza
Original genome ID	Hadza_PheChl_Fiber-Hadza-Nepal_E_16_1654__NODE_6028_length_20626_cov_8.756825
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	51.86 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	10
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9818
Virus hallmark genes (geNomad)	8
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	11.21
Jumbo phage	No

Genome content
Genome length (bp)	20,626
GC content	47.51%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	24
CDS density	93%
Average CDS length (bps)	803.38
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 51.86)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-0037219_1	742733.HMPREF9469_00921	67.4	0.00000000000186	N/A	N/A
Pfam	UHGV-0037219_1	PF04448	N/A	N/A	N/A	DUF551
PHROG	UHGV-0037219_2	phrog_36	59.0	8.2e-17	transcriptional regulator	transcription regulation
UniRef90	UHGV-0037219_2	UniRef90_A0A396MU93	196.0	0	RNA polymerase subunit sigma-70	N/A
eggNOG-mapper	UHGV-0037219_2	411902.CLOBOL_05672	167.0	0	N/A	N/A
KOfam	UHGV-0037219_3	K07474	105.2	1.1e-30	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-0037219_3	phrog_51	124.4	7.7e-37	terminase small subunit	head and packaging
UniRef90	UHGV-0037219_3	UniRef90_UPI000E4E3378	240.0	0	terminase small subunit	N/A
eggNOG-mapper	UHGV-0037219_3	641112.ACOK01000073_gene2887	187.0	0	Terminase small subunit	N/A
Pfam	UHGV-0037219_3	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-0037219_3	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0037219_3	PF03592,COG3728	N/A	N/A	N/A	N/A
KOfam	UHGV-0037219_4	K06909	100.0	3.2e-29	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0037219_4	phrog_2	80.6	3e-23	terminase large subunit	head and packaging
UniRef90	UHGV-0037219_4	UniRef90_A0A3R6QNE9	874.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0037219_4	1304866.K413DRAFT_0811	773.0	0	Phage terminase, large subunit, PBSX family	N/A
COG	UHGV-0037219_4	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0037219_4	PF03237,PF17289,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0037219_5	phrog_533	293.8	0	portal protein	head and packaging
UniRef90	UHGV-0037219_5	UniRef90_A0A3R6LPA5	881.0	0	Capsid protein	N/A
eggNOG-mapper	UHGV-0037219_5	742740.HMPREF9474_03501	780.0	0	N/A	N/A
structural_annotation	UHGV-0037219_5	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0037219_6	phrog_581	243.1	0	minor head protein	head and packaging
UniRef90	UHGV-0037219_6	UniRef90_A0A416KE36	542.0	0	Minor capsid protein	N/A
eggNOG-mapper	UHGV-0037219_6	742740.HMPREF9474_03503	466.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-0037219_6	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0037219_6	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0037219_6	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-0037219_8	phrog_355	59.8	3.9e-17	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0037219_8	UniRef90_A0A417J5P5	200.0	0	N/A	N/A
eggNOG-mapper	UHGV-0037219_8	97138.C820_00250	122.0	5.32e-35	N/A	N/A
Pfam	UHGV-0037219_8	PF14359	N/A	N/A	N/A	DUF4406
structural_annotation	UHGV-0037219_8	PF14359,COG3613	N/A	N/A	N/A	N/A
PHROG	UHGV-0037219_9	phrog_2303	137.1	1.4e-40	head scaffolding protein	head and packaging
eggNOG-mapper	UHGV-0037219_9	483218.BACPEC_01156	207.0	0	N/A	N/A
PHROG	UHGV-0037219_10	phrog_422	349.2	0	major head protein	head and packaging
UniRef90	UHGV-0037219_10	UniRef90_A0A3R6PT58	516.0	0	Capsid protein	N/A
eggNOG-mapper	UHGV-0037219_10	33035.JPJF01000093_gene2252	508.0	0	N/A	N/A
structural_annotation	UHGV-0037219_10	PF19821,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0037219_11	phrog_1378	76.2	3.2e-22	N/A	unknown function
UniRef90	UHGV-0037219_11	UniRef90_A0A0B3VH35	62.8	0.0000000000422	HALZ domain-containing protein	N/A
eggNOG-mapper	UHGV-0037219_11	483218.BACPEC_01154	62.8	0.00000000000609	N/A	N/A
PHROG	UHGV-0037219_12	phrog_541	90.4	1.5e-26	head-tail adaptor	connector
eggNOG-mapper	UHGV-0037219_12	1298920.KI911353_gene4848	204.0	0	N/A	N/A
PHROG	UHGV-0037219_13	phrog_8710	140.4	4.60046e-42	N/A	unknown function
eggNOG-mapper	UHGV-0037219_13	742740.HMPREF9474_03508	199.0	0	N/A	N/A
structural_annotation	UHGV-0037219_13	PF10665,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0037219_14	phrog_556	53.1	0.0000000000000056	minor head protein	head and packaging
eggNOG-mapper	UHGV-0037219_14	742740.HMPREF9474_03509	186.0	0	N/A	N/A
PHROG	UHGV-0037219_15	phrog_2595	80.9	1.3e-23	head-tail connector protein	connector
UniRef90	UHGV-0037219_15	UniRef90_UPI001D068DAC	176.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0037219_15	483218.BACPEC_01150	165.0	0	N/A	N/A
Pfam	UHGV-0037219_15	PF12691	N/A	N/A	Bacteriophage minor capsid protein	Minor_capsid_3
structural_annotation	UHGV-0037219_15	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0037219_16	phrog_820	138.4	2.79993e-41	major tail protein	tail
eggNOG-mapper	UHGV-0037219_16	483218.BACPEC_01149	209.0	0	domain, Protein	N/A
COG	UHGV-0037219_16	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0037219_16	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0037219_17	phrog_8300	96.7	1.6e-28	N/A	unknown function
eggNOG-mapper	UHGV-0037219_17	742740.HMPREF9474_03512	107.0	6.25e-29	N/A	N/A
structural_annotation	UHGV-0037219_17	PF06854	N/A	N/A	N/A	N/A
KOfam	UHGV-0037219_18	K08757	50.2	5.2e-19	APOA1; apolipoprotein A-I	N/A
PHROG	UHGV-0037219_18	phrog_1535	413.6	0	tail length tape measure protein	tail
UniRef90	UHGV-0037219_18	UniRef90_A0A174WQ97	716.0	0	Phage-like protein	N/A
eggNOG-mapper	UHGV-0037219_18	742740.HMPREF9474_03514	699.0	0	tape measure	N/A
COG	UHGV-0037219_18	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-0037219_18	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0037219_19	phrog_1194	77.7	1.3e-22	N/A	unknown function
eggNOG-mapper	UHGV-0037219_19	742740.HMPREF9474_03515	152.0	0	N/A	N/A
structural_annotation	UHGV-0037219_19	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0037219_20	phrog_13879	335.4	0	N/A	unknown function
eggNOG-mapper	UHGV-0037219_20	742740.HMPREF9474_03516	557.0	0	N/A	N/A
structural_annotation	UHGV-0037219_20	PF03256,PF16466,PF13550,MF_00813,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-0037219_21	phrog_18725	70.5	2.6e-20	N/A	unknown function
eggNOG-mapper	UHGV-0037219_21	742740.HMPREF9474_03517	89.0	9.63e-21	N/A	N/A
PHROG	UHGV-0037219_22	phrog_30220	50.8	0.000000000000026	N/A	unknown function
eggNOG-mapper	UHGV-0037219_22	696281.Desru_1098	72.8	0.0000000000548	ATPase involved in DNA repair	N/A
COG	UHGV-0037219_22	COG0419	N/A	N/A	DNA repair exonuclease SbcCD ATPase subunit	N/A
structural_annotation	UHGV-0037219_22	PF20620,NF038128	N/A	N/A	N/A	N/A