UHGV-0038201 (vOTU-113010)

Viral Genome: UHGV-0038201

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0038201
vOTU ID	vOTU-113010
Representative Genome?	Yes
Source	Hadza
Original genome ID	Hadza_PheChl_Fiber-Hadza-Nepal_C_8_2273__NODE_2854_length_35222_cov_6.531427
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	77.36 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	17
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9813
Virus hallmark genes (geNomad)	10
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	40.56
Jumbo phage	No

Genome content
Genome length (bp)	35,222
GC content	45.92%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	51
CDS density	96%
Average CDS length (bps)	662.53
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 77.36)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0038201_1	phrog_27197	60.1	4.2e-17	N/A	unknown function
eggNOG-mapper	UHGV-0038201_1	886882.PPSC2_p0363	66.2	0.0000000000197	regulation of DNA-templated transcription, elongation	N/A
COG	UHGV-0038201_1	COG5164	N/A	N/A	Transcription elongation factor SPT5	N/A
structural_annotation	UHGV-0038201_1	NF007410	N/A	N/A	N/A	N/A
PHROG	UHGV-0038201_4	phrog_155	118.0	8.5e-35	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0038201_4	UniRef90_A0A396QXQ1	207.0	0	Recombinase	N/A
eggNOG-mapper	UHGV-0038201_4	386415.NT01CX_2192	127.0	3.57e-34	ERF superfamily	N/A
Pfam	UHGV-0038201_4	PF04404	N/A	N/A	ERF superfamily	ERF
structural_annotation	UHGV-0038201_4	PF04404,COG4712	N/A	N/A	N/A	N/A
PHROG	UHGV-0038201_5	phrog_398	202.0	0	N/A	unknown function
UniRef90	UHGV-0038201_5	UniRef90_UPI00068C968F	261.0	0	putative HNHc nuclease	N/A
eggNOG-mapper	UHGV-0038201_5	33035.JPJF01000122_gene2462	261.0	0	Putative HNHc nuclease	N/A
Pfam	UHGV-0038201_5	PF16784	N/A	N/A	Putative HNHc nuclease	HNHc_6
structural_annotation	UHGV-0038201_5	PF16784	N/A	N/A	N/A	N/A
PHROG	UHGV-0038201_6	phrog_244	88.1	9.6e-26	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0038201_6	887929.HMP0721_1279	122.0	7.83e-34	N/A	N/A
structural_annotation	UHGV-0038201_6	PF01870,MF_01490,NF040854,COG1591	N/A	N/A	N/A	N/A
PHROG	UHGV-0038201_7	phrog_11769	154.6	0	N/A	unknown function
UniRef90	UHGV-0038201_7	UniRef90_A0A416S3A2	459.0	0	Phage_rep_org_N domain-containing protein	N/A
eggNOG-mapper	UHGV-0038201_7	411470.RUMGNA_02197	176.0	0	phage replisome	N/A
Pfam	UHGV-0038201_7	PF09681	N/A	N/A	N-terminal phage replisome organiser (Phage_rep_org_N)	Phage_rep_org_N
NCBIFam	UHGV-0038201_7	TIGR01714.1	N/A	N/A	phage replisome organizer, putative, N-terminal region	N/A
structural_annotation	UHGV-0038201_7	PF09681,TIGR01714,COG3388	N/A	N/A	N/A	N/A
PHROG	UHGV-0038201_10	phrog_424	94.6	9.7e-28	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0038201_10	UniRef90_A0A2H4JC51	615.0	0	Putative 3'-phosphoadenosine 5'-phosphosulfatesulfotransferase/FAD synthetase-related enzyme	N/A
eggNOG-mapper	UHGV-0038201_10	411461.DORFOR_01142	658.0	0	N/A	N/A
COG	UHGV-0038201_10	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-0038201_10	PF01507,MF_00064,TIGR00434,COG0175	N/A	N/A	N/A	N/A
KOfam	UHGV-0038201_11	K00558	191.7	0	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-0038201_11	phrog_116	223.5	0	DNA methyltransferase	other
UniRef90	UHGV-0038201_11	UniRef90_A0A373MWF0	779.0	0	DNA (cytosine-5-)-methyltransferase	N/A
eggNOG-mapper	UHGV-0038201_11	742740.HMPREF9474_04317	704.0	0	C-5 cytosine-specific DNA methylase	N/A
PADLOC	UHGV-0038201_11	MTase_II_00020	98.4	1.2e-33	Type II methyltransferase	RM
Pfam	UHGV-0038201_11	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
COG	UHGV-0038201_11	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-0038201_11	PF00145,MF_00351,TIGR00675,COG0270	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0038201_15	476272.RUMHYD_01751	119.0	1.05e-33	N/A	N/A
PHROG	UHGV-0038201_17	phrog_8680	248.2	0	N/A	unknown function
UniRef90	UHGV-0038201_17	UniRef90_A0A416S3B0	413.0	0	N/A	N/A
eggNOG-mapper	UHGV-0038201_17	411470.RUMGNA_02208	249.0	0	N/A	N/A
Pfam	UHGV-0038201_17	PF14386	N/A	N/A	N/A	DUF4417
structural_annotation	UHGV-0038201_17	PF14386	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0038201_18	557436.Lreu_0830	91.7	6.52e-22	N/A	N/A
KOfam	UHGV-0038201_20	K06909	382.5	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0038201_20	phrog_3717	152.1	2.8026e-45	terminase large subunit	head and packaging
UniRef90	UHGV-0038201_20	UniRef90_A0A416S378	1041.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0038201_20	33035.JPJF01000106_gene3136	542.0	0	Terminase small subunit	N/A
Pfam	UHGV-0038201_20	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-0038201_20	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-0038201_20	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0038201_20	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0038201_20	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0038201_22	phrog_533	278.9	0	portal protein	head and packaging
UniRef90	UHGV-0038201_22	UniRef90_A0A1C6CDM8	632.0	0	Phage portal protein, putative, A118 family	N/A
eggNOG-mapper	UHGV-0038201_22	33035.JPJF01000106_gene3135	487.0	0	phage minor capsid protein	N/A
structural_annotation	UHGV-0038201_22	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0038201_23	phrog_1129	75.7	4.1e-22	holin	lysis
UniRef90	UHGV-0038201_23	UniRef90_A0A416S3E1	170.0	0	Enolase	N/A
eggNOG-mapper	UHGV-0038201_23	742740.HMPREF9474_03522	102.0	1.81e-27	N/A	N/A
Pfam	UHGV-0038201_23	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0038201_23	PF06946	N/A	N/A	N/A	N/A
PHROG	UHGV-0038201_24	phrog_581	241.0	0	minor head protein	head and packaging
UniRef90	UHGV-0038201_24	UniRef90_A0A416S3D5	787.0	0	Phage capsid protein	N/A
eggNOG-mapper	UHGV-0038201_24	476272.RUMHYD_01761	426.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-0038201_24	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0038201_24	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0038201_24	PF06152	N/A	N/A	N/A	N/A
UniRef90	UHGV-0038201_25	UniRef90_A0A416S3A4	212.0	0	CTP synthase	N/A
eggNOG-mapper	UHGV-0038201_25	476272.RUMHYD_01766	58.9	0.000000000753	N/A	N/A
UniRef90	UHGV-0038201_26	UniRef90_A0A843HPX3	76.6	4.1e-17	Sigma-70 family RNA polymerase sigma factor	N/A
eggNOG-mapper	UHGV-0038201_26	476272.RUMHYD_01951	58.9	0.000000000106	N/A	N/A
structural_annotation	UHGV-0038201_26	PF13404,TIGR01636	N/A	N/A	N/A	N/A
PHROG	UHGV-0038201_27	phrog_21718	69.2	6.6e-20	N/A	unknown function
eggNOG-mapper	UHGV-0038201_27	1235790.C805_00058	101.0	4.38e-25	N/A	N/A
eggNOG-mapper	UHGV-0038201_29	476272.RUMHYD_01770	61.6	0.0000000101	N/A	N/A
PHROG	UHGV-0038201_31	phrog_20016	72.9	3.4e-21	N/A	unknown function
UniRef90	UHGV-0038201_31	UniRef90_A0A316MV88	211.0	0	BclA_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0038201_31	397290.C810_05214	68.2	0.00000000000131	N/A	N/A
structural_annotation	UHGV-0038201_31	PF18573,NF033147	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0038201_32	PF00210,MF_01441,NF011597,COG1528	N/A	N/A	N/A	N/A
UniRef90	UHGV-0038201_34	UniRef90_UPI001C0EBA51	246.0	0	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-0038201_34	742765.HMPREF9457_02126	84.7	1.22e-17	COG NOG36366 non supervised orthologous group	N/A
PHROG	UHGV-0038201_35	phrog_247	283.0	0	major head protein	head and packaging
UniRef90	UHGV-0038201_35	UniRef90_A0A3R6K7E9	644.0	0	Phage coat protein	N/A
eggNOG-mapper	UHGV-0038201_35	1292035.H476_1014	423.0	0	N/A	N/A
COG	UHGV-0038201_35	COG1106	N/A	N/A	ATPase/GTPase, AAA15 family	N/A
structural_annotation	UHGV-0038201_35	PF20036,MF_04113,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0038201_36	phrog_541	102.7	2.3e-30	head-tail adaptor	connector
eggNOG-mapper	UHGV-0038201_36	476272.RUMHYD_01778	208.0	0	N/A	N/A
PHROG	UHGV-0038201_39	phrog_3366	88.7	1.8e-27	N/A	unknown function
eggNOG-mapper	UHGV-0038201_39	476272.RUMHYD_01779	187.0	0	N/A	N/A
structural_annotation	UHGV-0038201_39	PF20536,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0038201_40	phrog_556	72.8	3.3e-21	minor head protein	head and packaging
UniRef90	UHGV-0038201_40	UniRef90_UPI0008B4CFF0	168.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0038201_40	476272.RUMHYD_01780	207.0	0	N/A	N/A
Pfam	UHGV-0038201_40	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0038201_40	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0038201_41	phrog_3266	94.5	8.4e-28	tail completion	connector
eggNOG-mapper	UHGV-0038201_41	476272.RUMHYD_01781	216.0	0	N/A	N/A
structural_annotation	UHGV-0038201_41	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0038201_42	phrog_3099	121.0	9.1e-36	N/A	unknown function
eggNOG-mapper	UHGV-0038201_42	476272.RUMHYD_01782	264.0	0	N/A	N/A
structural_annotation	UHGV-0038201_42	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0038201_43	phrog_11299	99.8	2e-29	N/A	unknown function
eggNOG-mapper	UHGV-0038201_43	33035.JPJF01000106_gene3125	98.2	2.81e-24	N/A	N/A
structural_annotation	UHGV-0038201_43	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-0038201_44	phrog_706	122.3	2.9e-36	N/A	unknown function
UniRef90	UHGV-0038201_44	UniRef90_UPI00156F9D1C	266.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-0038201_44	476272.RUMHYD_01784	207.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0038201_44	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0038201_44	PF06854	N/A	N/A	N/A	N/A
KOfam	UHGV-0038201_45	K10421	49.1	0.000000000000038	CLIP1, RSN; CAP-Gly domain-containing linker protein 1	N/A
PHROG	UHGV-0038201_45	phrog_1535	269.1	0	tail length tape measure protein	tail
UniRef90	UHGV-0038201_45	UniRef90_A0A173R880	367.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0038201_45	476272.RUMHYD_01785	456.0	0	phage tail tape measure protein	N/A
COG	UHGV-0038201_45	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0038201_45	PF11172	N/A	N/A	N/A	N/A
PHROG	UHGV-0038201_46	phrog_1194	52.2	0.000000000000011	N/A	unknown function
structural_annotation	UHGV-0038201_46	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0038201_47	phrog_6616	437.7	0	tail protein	tail
UniRef90	UHGV-0038201_47	UniRef90_UPI0015714EA8	532.0	0	tail fiber domain-containing protein	N/A
eggNOG-mapper	UHGV-0038201_47	1121866.AUGK01000003_gene1439	246.0	0	Phage minor structural protein	N/A
Pfam	UHGV-0038201_47	PF13884	N/A	N/A	Chaperone of endosialidase	Peptidase_S74
COG	UHGV-0038201_47	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0038201_47	PF05113,PF20010,NF033848,COG3500	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0038201_48	349123.Lreu23DRAFT_3172	60.8	0.00000133	N/A	N/A
UniRef90	UHGV-0038201_49	UniRef90_A0A7X2JUI3	79.3	6.82e-18	Post-SET domain-containing protein	N/A
COG	UHGV-0038201_49	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
PHROG	UHGV-0038201_50	phrog_199	62.1	6.6e-18	holin	lysis
UniRef90	UHGV-0038201_50	UniRef90_A0A373MZ88	285.0	0	Holin	N/A
eggNOG-mapper	UHGV-0038201_50	411460.RUMTOR_02100	231.0	0	N/A	N/A
Pfam	UHGV-0038201_50	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-0038201_50	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
structural_annotation	UHGV-0038201_50	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
KOfam	UHGV-0038201_51	K01447	98.1	1.3e-28	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0038201_51	phrog_3088	163.0	0	amidase	lysis
UniRef90	UHGV-0038201_51	UniRef90_A0A174B7N2	473.0	0	N-acetylmuramoyl-L-alanine amidase CwlH	N/A
eggNOG-mapper	UHGV-0038201_51	478749.BRYFOR_07564	232.0	0	n-acetylmuramoyl-l-alanine amidase	N/A
Pfam	UHGV-0038201_51	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
COG	UHGV-0038201_51	COG3087	N/A	N/A	Cell division protein FtsN	N/A
structural_annotation	UHGV-0038201_51	PF01510,PF08239,NF008758,NF041850,COG5632	N/A	N/A	N/A	N/A