Viral Genome: UHGV-0038568


Overview
UHGV ID UHGV-0038568
vOTU ID vOTU-112172
Representative Genome? Yes
Source Hadza
Original genome ID Nepal_MoBio_Fiber-Hadza-Nepal_F_17_RAU1014YZ__NODE_722_length_58867_cov_27.062868
Associated BioSample SAMEA4969175
Viral genome confidence Confident

Quality assessment
CheckV method AAI-based
CheckV completeness 73.28 (Medium-quality)
Trimmed provirus No
CheckV viral markers 21
CheckV host markers 1
Recoded stop codon No
Viral Content
geNomad score 0.9801
Virus hallmark genes (geNomad) 12
Plasmid hallmark genes (geNomad) 0
viralVerify prediction Virus
viralVerify score 46.42
Jumbo phage No

Genome content
Genome length (bp) 58,867
GC content 38.38%
Genetic code The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes 103
CDS density 87%
Average CDS length (bps) 498.50
Total tRNA genes 3
Suppressor tRNA genes 0



Genome content

Select to view:   Genome Viewer   Functional Annotation

Genome View (Completeness: 73.28)
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