| Overview | |
|---|---|
| UHGV ID | UHGV-0038854 |
| vOTU ID | vOTU-168614 |
| Representative Genome? | Yes |
| Source | Hadza |
| Original genome ID | Hadza_PheChl_Fiber-Hadza-Nepal_C_20_1180__NODE_2186_length_45993_cov_6.568081 |
| Associated BioSample | SAMEA4765639 |
| Viral genome confidence | Uncertain |
| Quality assessment | |
|---|---|
| CheckV method | AAI-based |
| CheckV completeness | 57.83 (Medium-quality) |
| Trimmed provirus | No |
| CheckV viral markers | 7 |
| CheckV host markers | 2 |
| Recoded stop codon | No |
| Viral Content | |
|---|---|
| geNomad score | 0.9797 |
| Virus hallmark genes (geNomad) | 4 |
| Plasmid hallmark genes (geNomad) | 0 |
| viralVerify prediction | Plasmid |
| viralVerify score | 7.33 |
| Jumbo phage | No |
| Genome content | |
|---|---|
| Genome length (bp) | 45,993 |
| GC content | 38.65% |
| Genetic code | The Standard Bacterial, Archaeal and Plant Plastid Code (11) |
| CDS genes | 65 |
| CDS density | 88% |
| Average CDS length (bps) | 625.71 |
| Total tRNA genes | 0 |
| Suppressor tRNA genes | 0 |