UHGV-0039393 (vOTU-155291)

Viral Genome: UHGV-0039393

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0039393
vOTU ID	vOTU-155291
Representative Genome?	Yes
Source	Hadza
Original genome ID	Nepal_MoBio_Fiber-Hadza-Nepal_H_15_CHE1020TZ__NODE_815_length_38312_cov_8.554963
Associated BioSample	SAMEA4969133
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	71.21 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	31
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9768
Virus hallmark genes (geNomad)	9
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	50.33
Jumbo phage	No

Genome content
Genome length (bp)	38,312
GC content	46.41%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	64
CDS density	90%
Average CDS length (bps)	537.94
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 71.21)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0039393_1	phrog_760	370.1	0	N/A	unknown function
UniRef90	UHGV-0039393_1	UniRef90_A0A5Q2F4G3	342.0	0	Prohead protease	N/A
eggNOG-mapper	UHGV-0039393_1	1073754.G0ZND7_9VIRU	334.0	0	N/A	N/A
structural_annotation	UHGV-0039393_1	PF09979,TIGR01543,COG3566	N/A	N/A	N/A	N/A
PHROG	UHGV-0039393_2	phrog_766	148.2	2.66247e-44	head decoration	head and packaging
UniRef90	UHGV-0039393_2	UniRef90_A0A346FE82	138.0	1.56e-39	Virion structural protein	N/A
eggNOG-mapper	UHGV-0039393_2	95619.PM1_0217775	103.0	1.73e-26	N/A	N/A
structural_annotation	UHGV-0039393_2	PF02989,COG5471	N/A	N/A	N/A	N/A
PHROG	UHGV-0039393_3	phrog_771	461.0	0	virion structural protein	head and packaging
UniRef90	UHGV-0039393_3	UniRef90_UPI00038FA619	599.0	0	N/A	N/A
eggNOG-mapper	UHGV-0039393_3	101570.Q5G8Y0_9CAUD	483.0	0	N/A	N/A
Pfam	UHGV-0039393_3	PF19774	N/A	N/A	N/A	DUF6260
structural_annotation	UHGV-0039393_3	PF19774,MF_04119,NF041155,COG4834	N/A	N/A	N/A	N/A
PHROG	UHGV-0039393_4	phrog_786	165.5	0	N/A	unknown function
UniRef90	UHGV-0039393_4	UniRef90_A0A376F9V3	164.0	0	Gp11	N/A
eggNOG-mapper	UHGV-0039393_4	549.BW31_01427	172.0	0	N/A	N/A
PHROG	UHGV-0039393_5	phrog_1261	93.9	6.5e-28	N/A	unknown function
UniRef90	UHGV-0039393_5	UniRef90_A0A1Q5VGI5	67.4	0.000000000000117	50S ribosomal protein L13	N/A
eggNOG-mapper	UHGV-0039393_5	158822.LH89_20520	61.2	0.00000000000552	N/A	N/A
PHROG	UHGV-0039393_6	phrog_797	125.0	3.1e-37	N/A	unknown function
UniRef90	UHGV-0039393_6	UniRef90_Q5G8X6	129.0	3.36e-36	Gp13	N/A
eggNOG-mapper	UHGV-0039393_6	101570.Q5G8X6_9CAUD	129.0	5.64e-37	N/A	N/A
structural_annotation	UHGV-0039393_6	PF20536,TIGR01563	N/A	N/A	N/A	N/A
UniRef90	UHGV-0039393_7	UniRef90_UPI000BE57C21	151.0	4.06377e-44	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0039393_7	1147140.H6WRT9_9CAUD	138.0	9.99e-40	N/A	N/A
structural_annotation	UHGV-0039393_7	PF11114,TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-0039393_8	phrog_782	141.7	2.40042e-42	N/A	unknown function
UniRef90	UHGV-0039393_8	UniRef90_Q5G8X4	174.0	0	Gp15	N/A
eggNOG-mapper	UHGV-0039393_8	101570.Q5G8X4_9CAUD	174.0	0	N/A	N/A
structural_annotation	UHGV-0039393_8	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0039393_9	phrog_853	164.2	0	major tail protein	tail
UniRef90	UHGV-0039393_9	UniRef90_A0A346FE88	314.0	0	Putative major tail protein	N/A
eggNOG-mapper	UHGV-0039393_9	101570.Q5G8X3_9CAUD	208.0	0	Phage major tail protein 2	N/A
Pfam	UHGV-0039393_9	PF06199	N/A	N/A	Phage tail tube protein	Phage_tail_2
structural_annotation	UHGV-0039393_9	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0039393_10	phrog_791	209.8	0	N/A	unknown function
UniRef90	UHGV-0039393_10	UniRef90_UPI0010CBCD7D	427.0	0	N/A	N/A
eggNOG-mapper	UHGV-0039393_10	1147140.H6WRU2_9CAUD	169.0	0	N/A	N/A
Pfam	UHGV-0039393_10	PF19759	N/A	N/A	N/A	DUF6246
structural_annotation	UHGV-0039393_10	PF19759	N/A	N/A	N/A	N/A
PHROG	UHGV-0039393_12	phrog_1538	413.3	0	tail length tape measure protein	tail
UniRef90	UHGV-0039393_12	UniRef90_UPI0010CC55C1	1303.0	0	tape measure protein	N/A
eggNOG-mapper	UHGV-0039393_12	1168549.I6S1R4_9CAUD	304.0	0	peptidoglycan catabolic process	N/A
Pfam	UHGV-0039393_12	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-0039393_12	TIGR02675.1	N/A	N/A	tape measure protein	N/A
structural_annotation	UHGV-0039393_12	PF20155,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0039393_16	phrog_1525	71.7	8.1e-21	N/A	unknown function
PHROG	UHGV-0039393_17	phrog_14	85.6	6.4e-25	minor tail protein	tail
UniRef90	UHGV-0039393_17	UniRef90_V0A918	225.0	0	Phage minor tail protein	N/A
eggNOG-mapper	UHGV-0039393_17	101570.Q5G8W6_9CAUD	162.0	0	Phage minor tail protein	N/A
Pfam	UHGV-0039393_17	PF05939	N/A	N/A	Phage minor tail protein	Phage_min_tail
structural_annotation	UHGV-0039393_17	PF05939,TIGR02217,COG4718	N/A	N/A	N/A	N/A
PHROG	UHGV-0039393_18	phrog_3249	75.8	2.8e-22	N/A	unknown function
eggNOG-mapper	UHGV-0039393_18	355246.Q333C7_9CAUD	60.8	0.00000000000903	N/A	N/A
PHROG	UHGV-0039393_19	phrog_5689	86.6	1.9e-25	N/A	unknown function
UniRef90	UHGV-0039393_19	UniRef90_V0ACM4	166.0	0	ANT domain-containing protein	N/A
Pfam	UHGV-0039393_19	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
PHROG	UHGV-0039393_20	phrog_38567	150.7	4.2039e-45	N/A	unknown function
PHROG	UHGV-0039393_21	phrog_29559	86.3	2.1e-25	N/A	unknown function
UniRef90	UHGV-0039393_21	UniRef90_UPI001C60BA91	100.0	4.73e-27	transporter	N/A
PHROG	UHGV-0039393_22	phrog_18	245.4	0	minor tail protein	tail
UniRef90	UHGV-0039393_22	UniRef90_V0A922	474.0	0	Phage minor tail protein L	N/A
eggNOG-mapper	UHGV-0039393_22	101570.Q5G8W3_9CAUD	357.0	0	Phage minor tail protein L	N/A
Pfam	UHGV-0039393_22	PF05100	N/A	N/A	Phage minor tail protein L	Phage_tail_L
NCBIFam	UHGV-0039393_22	TIGR01600.1	N/A	N/A	phage minor tail protein L	N/A
structural_annotation	UHGV-0039393_22	PF05100,TIGR01600,COG4672	N/A	N/A	N/A	N/A
KOfam	UHGV-0039393_23	K21140	51.7	0.000000000000013	mec; [CysO sulfur-carrier protein]-S-L-cysteine hydrolase [EC:3.13.1.6]	N/A
PHROG	UHGV-0039393_23	phrog_30	246.8	0	minor tail protein	tail
UniRef90	UHGV-0039393_23	UniRef90_V0ANQ7	488.0	0	NlpC/P60 family protein	N/A
eggNOG-mapper	UHGV-0039393_23	1115512.EH105704_01_02090	320.0	0	JAB/MPN domain	N/A
Pfam	UHGV-0039393_23	PF00877	N/A	N/A	NlpC/P60 family	NLPC_P60
COG	UHGV-0039393_23	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
structural_annotation	UHGV-0039393_23	PF00877,TIGR02219,NF041370,COG0791,COG1310	N/A	N/A	N/A	N/A
PHROG	UHGV-0039393_24	phrog_32	87.7	5.9e-28	tail assembly protein	tail
UniRef90	UHGV-0039393_24	UniRef90_UPI0010AD5410	318.0	0	tail assembly protein	N/A
eggNOG-mapper	UHGV-0039393_24	1147140.H6WRW3_9CAUD	200.0	0	virus tail assembly	N/A
structural_annotation	UHGV-0039393_24	PF06805,NF008347,COG4723	N/A	N/A	N/A	N/A
PHROG	UHGV-0039393_25	phrog_31	907.7	0	baseplate hub protein Tal	tail
UniRef90	UHGV-0039393_25	UniRef90_UPI000DDF8A8B	2003.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-0039393_25	1168549.I6R9B3_9CAUD	1148.0	0	Putative phage tail protein	N/A
Pfam	UHGV-0039393_25	PF13550	N/A	N/A	Putative phage tail protein	Phage-tail_3
Pfam	UHGV-0039393_25	PF09327	N/A	N/A	N/A	DUF1983
structural_annotation	UHGV-0039393_25	PF09327,PF13550,PF16389,PF14879,NF040662,NF038116,COG4733	N/A	N/A	N/A	N/A
PHROG	UHGV-0039393_26	phrog_12984	91.9	3.8e-27	lipoprotein	other
UniRef90	UHGV-0039393_26	UniRef90_UPI000BB719DD	104.0	1.11e-27	membrane lipoprotein lipid attachment site-containing protein	N/A
eggNOG-mapper	UHGV-0039393_26	1540098.A0A0A0RVZ8_9CAUD	90.1	8.09e-23	N/A	N/A
PHROG	UHGV-0039393_27	phrog_1980	275.4	0	tail fiber protein	tail
UniRef90	UHGV-0039393_27	UniRef90_A0A343S150	687.0	0	Putative tail tip protein	N/A
eggNOG-mapper	UHGV-0039393_27	490103.FIB11_BPE32	359.0	0	outer membrane	N/A
Pfam	UHGV-0039393_27	PF13884	N/A	N/A	Chaperone of endosialidase	Peptidase_S74
structural_annotation	UHGV-0039393_27	PF12195	N/A	N/A	N/A	N/A
KOfam	UHGV-0039393_28	K14059	91.7	1.2e-26	int; integrase	N/A
PHROG	UHGV-0039393_28	phrog_1	158.7	0	integrase	integration and excision
UniRef90	UHGV-0039393_28	UniRef90_A0A346FE28	783.0	0	Integrase	N/A
eggNOG-mapper	UHGV-0039393_28	1168549.I6R9B6_9CAUD	338.0	0	Pfam:Arm-DNA-bind_3	N/A
Pfam	UHGV-0039393_28	PF13356	N/A	N/A	Arm DNA-binding domain	Arm-DNA-bind_3
Pfam	UHGV-0039393_28	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
structural_annotation	UHGV-0039393_28	PF00589,PF13356,PF14659,MF_01808,NF007246,COG4974	N/A	N/A	N/A	N/A
PHROG	UHGV-0039393_29	phrog_4745	44.5	0.0000000000023	DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0039393_29	UniRef90_UPI000FFB9E7B	149.0	1.4013e-45	helix-turn-helix domain containing protein	N/A
Pfam	UHGV-0039393_29	PF13384	N/A	N/A	Homeodomain-like domain	HTH_23
structural_annotation	UHGV-0039393_29	PF05930,NF033499,COG3311	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0039393_30	NF037951	N/A	N/A	N/A	N/A
PHROG	UHGV-0039393_32	phrog_72	156.6	0	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0039393_32	UniRef90_U9ZTE9	281.0	0	NinB protein	N/A
eggNOG-mapper	UHGV-0039393_32	1147143.K7P6U0_9CAUD	157.0	0	NinB protein	N/A
Pfam	UHGV-0039393_32	PF05772	N/A	N/A	NinB protein	NinB
structural_annotation	UHGV-0039393_32	PF05772,NF007281	N/A	N/A	N/A	N/A
KOfam	UHGV-0039393_36	K02314	340.9	0	dnaB; replicative DNA helicase [EC:5.6.2.3]	N/A
PHROG	UHGV-0039393_36	phrog_19	363.6	0	DnaB-like replicative helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0039393_36	UniRef90_A0A2X5PKT2	850.0	0	DNA helicase	N/A
eggNOG-mapper	UHGV-0039393_36	1127357.I1TEG1_9CAUD	499.0	0	DnaB-like helicase N terminal domain	N/A
Pfam	UHGV-0039393_36	PF00772	N/A	N/A	DnaB-like helicase N terminal domain	DnaB
Pfam	UHGV-0039393_36	PF03796	N/A	N/A	DnaB-like helicase C terminal domain	DnaB_C
structural_annotation	UHGV-0039393_36	PF03796,PF00772,MF_04155,TIGR00665,COG0305	N/A	N/A	N/A	N/A
PHROG	UHGV-0039393_37	phrog_704	468.1	0	DNA repair exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0039393_37	UniRef90_A0A6B9X1J2	519.0	0	Putative phosphoesterase	N/A
eggNOG-mapper	UHGV-0039393_37	1315956.M9QWT5_9CAUD	517.0	0	hydrolase activity	N/A
structural_annotation	UHGV-0039393_37	PF12850,MF_00325,NF041030,COG1311	N/A	N/A	N/A	N/A
KOfam	UHGV-0039393_40	K07741	89.7	7.4e-26	antB; anti-repressor protein	N/A
PHROG	UHGV-0039393_40	phrog_5817	115.1	6e-34	anti-repressor Ant	transcription regulation
UniRef90	UHGV-0039393_40	UniRef90_UPI001BFE3B08	339.0	0	antA/AntB antirepressor family protein	N/A
eggNOG-mapper	UHGV-0039393_40	1278971.AOGF01000003_gene1454	80.5	0.0000000000000013	AntA/AntB antirepressor	N/A
Pfam	UHGV-0039393_40	PF08346	N/A	N/A	AntA/AntB antirepressor	AntA
COG	UHGV-0039393_40	COG3561	N/A	N/A	Phage anti-repressor protein Ant	N/A
PHROG	UHGV-0039393_41	phrog_20981	189.3	0	N/A	unknown function
UniRef90	UHGV-0039393_41	UniRef90_UPI001F0CE2E9	566.0	0	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0039393_41	1080067.BAZH01000011_gene673	249.0	0	Helix-turn-helix domain	N/A
Pfam	UHGV-0039393_41	PF13730	N/A	N/A	Helix-turn-helix domain	HTH_36
COG	UHGV-0039393_41	COG0640	N/A	N/A	DNA-binding transcriptional regulator, ArsR family	N/A
structural_annotation	UHGV-0039393_41	PF13730,MF_01909,NF040939,COG5529	N/A	N/A	N/A	N/A
PHROG	UHGV-0039393_42	phrog_4617	41.5	0.00000000002	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0039393_42	UniRef90_UPI000BBC4D3E	144.0	2.32616e-43	MarR family transcriptional regulator	N/A
KOfam	UHGV-0039393_43	K01356	55.8	0.0000000000000011	lexA; repressor LexA [EC:3.4.21.88]	N/A
PHROG	UHGV-0039393_43	phrog_4	114.2	1.4e-33	transcriptional repressor	transcription regulation
UniRef90	UHGV-0039393_43	UniRef90_A0A8E0J140	409.0	0	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0039393_43	173443.Q8HAG7_BPST6	190.0	0	Peptidase S24-like	N/A
Pfam	UHGV-0039393_43	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
Pfam	UHGV-0039393_43	PF00717	N/A	N/A	Peptidase S24-like	Peptidase_S24
structural_annotation	UHGV-0039393_43	PF00717,PF01381,MF_00015,TIGR00498,COG2932	N/A	N/A	N/A	N/A
PHROG	UHGV-0039393_45	phrog_34942	98.8	2.8e-29	N/A	unknown function
PHROG	UHGV-0039393_46	phrog_155	148.3	4.06377e-44	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0039393_46	UniRef90_A0A4T6JUX0	382.0	0	Recombinase	N/A
eggNOG-mapper	UHGV-0039393_46	754331.AEME01000001_gene3599	214.0	0	ERF superfamily	N/A
Pfam	UHGV-0039393_46	PF04404	N/A	N/A	ERF superfamily	ERF
structural_annotation	UHGV-0039393_46	PF04404,TIGR00607,COG4712	N/A	N/A	N/A	N/A
KOfam	UHGV-0039393_47	K03111	109.5	4.8e-32	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0039393_47	phrog_44	128.1	6.7e-38	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0039393_47	UniRef90_A0A2X5PKV7	213.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0039393_47	1127514.H9C0R6_9CAUD	105.0	5.77e-27	Single-strand binding protein family	N/A
Pfam	UHGV-0039393_47	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0039393_47	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0039393_47	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0039393_47	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0039393_48	phrog_656	103.9	8.1e-31	abc2 anti-RecBCD	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0039393_48	UniRef90_A0A2X5QNF8	183.0	0	Anti-RecBCD protein 2	N/A
PHROG	UHGV-0039393_49	phrog_28542	162.4	0	N/A	unknown function
UniRef90	UHGV-0039393_49	UniRef90_UPI00132F83E7	155.0	0	N/A	N/A
PHROG	UHGV-0039393_52	phrog_28396	202.2	0	N/A	unknown function
UniRef90	UHGV-0039393_52	UniRef90_V0A7X8	181.0	0	Toxin-antitoxin system, toxin component domain protein	N/A
PHROG	UHGV-0039393_53	phrog_34199	131.9	1.1e-39	N/A	unknown function
PHROG	UHGV-0039393_54	phrog_34371	235.9	0	N/A	unknown function
PHROG	UHGV-0039393_55	phrog_1515	181.9	0	N/A	unknown function
PHROG	UHGV-0039393_56	phrog_28996	153.2	0	N/A	unknown function
PHROG	UHGV-0039393_57	phrog_37004	144.0	1.49939e-43	N/A	unknown function
PHROG	UHGV-0039393_58	phrog_36823	151.5	1.4013e-45	N/A	unknown function
PHROG	UHGV-0039393_59	phrog_14059	46.8	0.00000000000043	N/A	unknown function
UniRef90	UHGV-0039393_59	UniRef90_A0A4T3YH70	138.0	3.66005e-41	Cell division protein FtsK	N/A
PHROG	UHGV-0039393_60	phrog_111	162.4	0	DNA methyltransferase	other
UniRef90	UHGV-0039393_60	UniRef90_A0A4T3YHC2	367.0	0	Phage N-6-adenine-methyltransferase	N/A
eggNOG-mapper	UHGV-0039393_60	642227.HA49_08485	196.0	0	DNA N-6-adenine-methyltransferase (Dam)	N/A
PADLOC	UHGV-0039393_60	oMTase_00010	81.0	7.3e-25	orphan methyltransferase	RM
Pfam	UHGV-0039393_60	PF05869	N/A	N/A	DNA N-6-adenine-methyltransferase (Dam)	Dam
NCBIFam	UHGV-0039393_60	TIGR01712.1	N/A	N/A	phage N-6-adenine-methyltransferase	N/A
structural_annotation	UHGV-0039393_60	PF05869,MF_01872,TIGR01712,COG4123	N/A	N/A	N/A	N/A
PHROG	UHGV-0039393_61	phrog_474	68.3	1.9e-19	phosphofructokinase	other
UniRef90	UHGV-0039393_61	UniRef90_UPI0019CE7732	269.0	0	N/A	N/A
eggNOG-mapper	UHGV-0039393_61	624134.T2DRE9_9CAUD	72.8	0.0000000000000745	N/A	N/A
Pfam	UHGV-0039393_61	PF19905	N/A	N/A	N/A	DUF6378
structural_annotation	UHGV-0039393_61	PF19905	N/A	N/A	N/A	N/A
PHROG	UHGV-0039393_62	phrog_4899	140.8	9.19952e-42	N/A	unknown function
UniRef90	UHGV-0039393_62	UniRef90_A0A520P730	57.0	0.000000445	VUT family protein	N/A
eggNOG-mapper	UHGV-0039393_62	1121116.KB894777_gene1878	75.1	0.0000000000000119	queuosine salvage	N/A
COG	UHGV-0039393_62	COG1738	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0039393_62	PF02592,MF_02088,NF008406,COG1738	N/A	N/A	N/A	N/A
PHROG	UHGV-0039393_63	phrog_757	242.8	0	DNA methyltransferase	other
UniRef90	UHGV-0039393_63	UniRef90_UPI00132F6CCE	520.0	0	DNA cytosine methyltransferase	N/A
eggNOG-mapper	UHGV-0039393_63	889338.G3BLM5_9CAUD	291.0	0	methyltransferase activity	N/A
structural_annotation	UHGV-0039393_63	PF01728,MF_01547,NF008390,COG0293	N/A	N/A	N/A	N/A
PHROG	UHGV-0039393_64	phrog_30170	126.7	4.6e-38	N/A	unknown function