Viral Genome: UHGV-0039556


Overview
UHGV ID UHGV-0039556
vOTU ID vOTU-029197
Representative Genome? Yes
Source Hadza
Original genome ID Hadza_PheChl_Fiber-Hadza-Nepal_C_20_1180__NODE_1694_length_54678_cov_30.164722
Associated BioSample N/A
Viral genome confidence Confident

Quality assessment
CheckV method HMM-based
CheckV completeness 71.6 (Medium-quality)
Trimmed provirus No
CheckV viral markers 23
CheckV host markers 3
Recoded stop codon No
Viral Content
geNomad score 0.9763
Virus hallmark genes (geNomad) 13
Plasmid hallmark genes (geNomad) 0
viralVerify prediction Virus
viralVerify score 65.18
Jumbo phage No

Genome content
Genome length (bp) 54,601
GC content 42.55%
Genetic code The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes 84
CDS density 93%
Average CDS length (bps) 601.36
Total tRNA genes 0
Suppressor tRNA genes 0



Genome content

Select to view:   Genome Viewer   Functional Annotation

Genome View (Completeness: 71.6)
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