| Overview | |
|---|---|
| UHGV ID | UHGV-0040070 |
| vOTU ID | vOTU-000195 |
| Representative Genome? | No |
| Source | Hadza |
| Original genome ID | Nepal_MoBio_Fiber-Hadza-Nepal_D_17_CHE1007SZ__NODE_681_length_79113_cov_4.695253 |
| Associated BioSample | SAMEA4969130 |
| Viral genome confidence | Confident |
| Quality assessment | |
|---|---|
| CheckV method | AAI-based |
| CheckV completeness | 53.82 (Medium-quality) |
| Trimmed provirus | No |
| CheckV viral markers | 19 |
| CheckV host markers | 2 |
| Recoded stop codon | Yes |
| Viral Content | |
|---|---|
| geNomad score | 0.9799 |
| Virus hallmark genes (geNomad) | 4 |
| Plasmid hallmark genes (geNomad) | 0 |
| viralVerify prediction | Uncertain - plasmid or chromosomal |
| viralVerify score | 1.88 |
| Jumbo phage | No |
| Genome content | |
|---|---|
| Genome length (bp) | 79,113 |
| GC content | 39.40% |
| Genetic code | Blepharisma Nuclear Code (15) |
| CDS genes | 90 |
| CDS density | 81% |
| Average CDS length (bps) | 715.43 |
| Total tRNA genes | 16 |
| Suppressor tRNA genes | 1 |