UHGV-0041153 (vOTU-044871)

Viral Genome: UHGV-0041153

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0041153
vOTU ID	vOTU-044871
Representative Genome?	Yes
Source	Hadza
Original genome ID	Nepal_MoBio_Fiber-Hadza-Nepal_D_19_CHE1008TZ__NODE_535_length_50854_cov_15.360439
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	DTR
CheckV completeness	100 (Complete)
Trimmed provirus	No
CheckV viral markers	28
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9687
Virus hallmark genes (geNomad)	9
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	36.27
Jumbo phage	No

Genome content
Genome length (bp)	50,800
GC content	34.14%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	71
CDS density	94%
Average CDS length (bps)	669.85
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0041153_1	phrog_4372	57.5	8.6e-17	tail length tape measure protein	tail
UniRef90	UHGV-0041153_2	UniRef90_A0A7X4ZPC4	141.0	4.55002e-41	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0041153_2	665956.HMPREF1032_00685	145.0	2.29813e-43	N/A	N/A
Pfam	UHGV-0041153_2	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-0041153_2	TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-0041153_3	phrog_4338	212.7	0	N/A	unknown function
eggNOG-mapper	UHGV-0041153_3	742733.HMPREF9469_05023	170.0	0	N/A	N/A
PHROG	UHGV-0041153_4	phrog_4282	155.3	0	N/A	unknown function
eggNOG-mapper	UHGV-0041153_4	742740.HMPREF9474_02266	115.0	2.31e-31	N/A	N/A
PHROG	UHGV-0041153_5	phrog_2645	267.0	0	major tail protein	tail
UniRef90	UHGV-0041153_5	UniRef90_A0A644ZQB8	213.0	0	Big_5 domain-containing protein	N/A
eggNOG-mapper	UHGV-0041153_5	742740.HMPREF9474_02267	196.0	0	N/A	N/A
structural_annotation	UHGV-0041153_5	PF06488,TIGR01603,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0041153_6	phrog_78	41.3	0.000000000026	tail terminator	connector
UniRef90	UHGV-0041153_6	UniRef90_A0A5J6D7U9	120.0	1.49e-33	Tail terminator	N/A
eggNOG-mapper	UHGV-0041153_6	691965.D4P7D8_9CAUD	115.0	2.92e-32	N/A	N/A
structural_annotation	UHGV-0041153_6	PF20765	N/A	N/A	N/A	N/A
PHROG	UHGV-0041153_7	phrog_4270	128.6	1.8e-38	N/A	unknown function
eggNOG-mapper	UHGV-0041153_7	411460.RUMTOR_01344	117.0	1.02e-32	N/A	N/A
structural_annotation	UHGV-0041153_7	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
KOfam	UHGV-0041153_9	K06904	69.4	2.1e-20	N/A	N/A
PHROG	UHGV-0041153_9	phrog_3270	742.4	0	head maturation protease	head and packaging
UniRef90	UHGV-0041153_9	UniRef90_A0A1Y4MXD5	704.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-0041153_9	691965.D4P7D6_9CAUD	488.0	0	peptidase activity	N/A
Pfam	UHGV-0041153_9	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
Pfam	UHGV-0041153_9	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
structural_annotation	UHGV-0041153_9	PF04586,PF06673,TIGR01543,TIGR01554,COG3740,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0041153_10	phrog_12	110.9	8.7e-33	portal protein	head and packaging
UniRef90	UHGV-0041153_10	UniRef90_UPI001D05D1F2	515.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-0041153_10	411460.RUMTOR_01348	519.0	0	Phage portal protein	N/A
Pfam	UHGV-0041153_10	PF04860	N/A	N/A	Phage portal protein	Phage_portal
structural_annotation	UHGV-0041153_10	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-0041153_11	phrog_32444	64.3	4.4e-21	N/A	unknown function
eggNOG-mapper	UHGV-0041153_11	428125.CLOLEP_01408	65.5	0.0000000000323	N/A	N/A
PHROG	UHGV-0041153_14	phrog_9	239.0	0	terminase large subunit	head and packaging
UniRef90	UHGV-0041153_14	UniRef90_A0A173Z354	921.0	0	Phage terminase-like protein, large subunit	N/A
eggNOG-mapper	UHGV-0041153_14	742740.HMPREF9474_02272	929.0	0	Phage Terminase	N/A
Pfam	UHGV-0041153_14	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0041153_14	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0041153_14	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0041153_15	phrog_4247	127.2	5.2e-38	virion structural protein	head and packaging
UniRef90	UHGV-0041153_15	UniRef90_A0A373C8E1	104.0	5.61e-26	Structural protein	N/A
eggNOG-mapper	UHGV-0041153_15	428125.CLOLEP_01407	112.0	1.33e-30	N/A	N/A
PHROG	UHGV-0041153_16	phrog_4321	182.2	0	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0041153_16	UniRef90_A0A6M3SVA7	158.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0041153_16	665956.HMPREF1032_00668	158.0	0	N/A	N/A
PHROG	UHGV-0041153_17	phrog_4259	134.0	3.8e-40	N/A	unknown function
eggNOG-mapper	UHGV-0041153_17	411460.RUMTOR_01353	105.0	8.64e-28	N/A	N/A
PHROG	UHGV-0041153_18	phrog_4303	107.7	4.9e-32	N/A	unknown function
eggNOG-mapper	UHGV-0041153_18	665956.HMPREF1032_00666	98.6	4.57e-26	N/A	N/A
PHROG	UHGV-0041153_19	phrog_4291	1179.9	0	RNA-dependent RNA polymerase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0041153_19	UniRef90_A0A3A9IVX2	995.0	0	Helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0041153_19	742733.HMPREF9469_05039	976.0	0	N/A	N/A
Pfam	UHGV-0041153_19	PF08281	N/A	N/A	Sigma-70, region 4	Sigma70_r4_2
structural_annotation	UHGV-0041153_19	PF05183	N/A	N/A	N/A	N/A
PHROG	UHGV-0041153_20	phrog_3953	203.9	0	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0041153_20	UniRef90_A0A3A9IQR6	257.0	0	N/A	N/A
eggNOG-mapper	UHGV-0041153_20	742740.HMPREF9474_02279	248.0	0	N/A	N/A
Pfam	UHGV-0041153_20	PF10926	N/A	N/A	N/A	DUF2800
structural_annotation	UHGV-0041153_20	PF10926,MF_03030,TIGR00372,COG2887	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0041153_21	742740.HMPREF9474_02280	108.0	9.66e-30	N/A	N/A
structural_annotation	UHGV-0041153_21	PF01870,COG1591	N/A	N/A	N/A	N/A
KOfam	UHGV-0041153_23	K22299	41.2	0.000000000034	rghR; HTH-type transcriptional regulator, competence development regulator	N/A
Pfam	UHGV-0041153_23	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
COG	UHGV-0041153_23	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
PHROG	UHGV-0041153_28	phrog_6568	75.5	4.5e-22	N/A	unknown function
eggNOG-mapper	UHGV-0041153_28	428125.CLOLEP_01394	80.5	2.35e-19	N/A	N/A
eggNOG-mapper	UHGV-0041153_32	411473.RUMCAL_02525	125.0	6.77e-36	N/A	N/A
PHROG	UHGV-0041153_33	phrog_2245	56.1	7.2e-16	nucleoside triphosphate pyrophosphohydrolase	other
eggNOG-mapper	UHGV-0041153_33	411460.RUMTOR_01373	67.0	0.000000000000961	N/A	N/A
structural_annotation	UHGV-0041153_33	PF12643,MF_01020,NF001610,COG0140	N/A	N/A	N/A	N/A
PHROG	UHGV-0041153_36	phrog_6721	260.7	0	N/A	unknown function
eggNOG-mapper	UHGV-0041153_36	665956.HMPREF1032_00655	285.0	0	N/A	N/A
structural_annotation	UHGV-0041153_36	PF02511,MF_01408,TIGR02170,COG1351	N/A	N/A	N/A	N/A
PHROG	UHGV-0041153_44	phrog_24386	186.8	0	N/A	unknown function
eggNOG-mapper	UHGV-0041153_44	478749.BRYFOR_08546	174.0	0	UMP catabolic process	N/A
COG	UHGV-0041153_44	COG0647	N/A	N/A	Ribonucleotide monophosphatase NagD, HAD superfamily	N/A
PHROG	UHGV-0041153_48	phrog_62	137.2	1.10001e-40	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0041153_48	UniRef90_A0A4D7AM36	523.0	0	DEAD/DEAH box helicase family protein	N/A
eggNOG-mapper	UHGV-0041153_48	742740.HMPREF9474_02299	507.0	0	Helicase conserved C-terminal domain	N/A
COG	UHGV-0041153_48	COG0553	N/A	N/A	Superfamily II DNA or RNA helicase, SNF2 family	N/A
structural_annotation	UHGV-0041153_48	PF02399,MF_01821,NF038318,COG0553	N/A	N/A	N/A	N/A
PHROG	UHGV-0041153_49	phrog_4787	178.0	0	single strand annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0041153_49	UniRef90_D4P7I8	135.0	3.47e-37	Gp077	N/A
eggNOG-mapper	UHGV-0041153_49	742733.HMPREF9469_05065	161.0	0	N/A	N/A
structural_annotation	UHGV-0041153_49	PF21265,MF_04153	N/A	N/A	N/A	N/A
PHROG	UHGV-0041153_50	phrog_4210	1874.3	0	DNA polymerase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0041153_50	UniRef90_UPI001D06573B	1678.0	0	N/A	N/A
eggNOG-mapper	UHGV-0041153_50	428125.CLOLEP_01375	1674.0	0	DNA polymerase type-B family	N/A
Pfam	UHGV-0041153_50	PF19263	N/A	N/A	N/A	DUF5906
Pfam	UHGV-0041153_50	PF03288	N/A	N/A	Poxvirus D5 protein-like	Pox_D5
structural_annotation	UHGV-0041153_50	PF00136,PF05272,PF10991,PF09250,MF_04100,MF_00016,NF011296,TIGR00592,COG3378,COG0417	N/A	N/A	N/A	N/A
PHROG	UHGV-0041153_52	phrog_4678	177.6	0	N/A	unknown function
eggNOG-mapper	UHGV-0041153_52	428125.CLOLEP_01372	168.0	0	N/A	N/A
PHROG	UHGV-0041153_53	phrog_4695	97.4	2.2e-28	N/A	unknown function
eggNOG-mapper	UHGV-0041153_53	411460.RUMTOR_02032	60.5	0.0000000189	N/A	N/A
PHROG	UHGV-0041153_54	phrog_2152	212.2	0	N/A	unknown function
UniRef90	UHGV-0041153_54	UniRef90_UPI0019578B0D	182.0	0	N/A	N/A
eggNOG-mapper	UHGV-0041153_54	411460.RUMTOR_02029	181.0	0	N/A	N/A
Pfam	UHGV-0041153_54	PF19880	N/A	N/A	N/A	DUF6353
structural_annotation	UHGV-0041153_54	PF19880	N/A	N/A	N/A	N/A
PHROG	UHGV-0041153_55	phrog_4079	189.2	0	N/A	unknown function
eggNOG-mapper	UHGV-0041153_55	742740.HMPREF9474_02312	151.0	1.34525e-43	N/A	N/A
PHROG	UHGV-0041153_58	phrog_2152	214.6	0	N/A	unknown function
UniRef90	UHGV-0041153_58	UniRef90_UPI0018AB827B	199.0	0	N/A	N/A
eggNOG-mapper	UHGV-0041153_58	742733.HMPREF9469_05079	207.0	0	N/A	N/A
Pfam	UHGV-0041153_58	PF19880	N/A	N/A	N/A	DUF6353
structural_annotation	UHGV-0041153_58	PF19880	N/A	N/A	N/A	N/A
PHROG	UHGV-0041153_63	phrog_1129	77.4	1.1e-22	holin	lysis
UniRef90	UHGV-0041153_63	UniRef90_C6LIM6	137.0	2.6e-40	Holin	N/A
eggNOG-mapper	UHGV-0041153_63	478749.BRYFOR_08506	137.0	4.36e-41	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-0041153_63	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0041153_63	PF06946	N/A	N/A	N/A	N/A
KOfam	UHGV-0041153_64	K01447	57.2	3.6e-16	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0041153_64	phrog_20388	293.5	0	endolysin	lysis
UniRef90	UHGV-0041153_64	UniRef90_A0A374N1L8	339.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-0041153_64	1203606.HMPREF1526_00253	311.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-0041153_64	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
Pfam	UHGV-0041153_64	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
COG	UHGV-0041153_64	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0041153_64	PF01510,PF19087,MF_04111,NF008758,COG3023	N/A	N/A	N/A	N/A
PHROG	UHGV-0041153_66	phrog_1863	74.3	9e-22	N/A	unknown function
eggNOG-mapper	UHGV-0041153_66	552398.HMPREF0866_01158	73.9	1.71e-16	N/A	N/A
PHROG	UHGV-0041153_69	phrog_1067	147.9	4.06377e-44	minor head protein	head and packaging
UniRef90	UHGV-0041153_69	UniRef90_UPI0013E10EEA	88.6	0.00000000000000558	phage tail protein	N/A
eggNOG-mapper	UHGV-0041153_69	1160721.RBI_I01574	75.9	0.0000000000133	Prophage endopeptidase tail	N/A
Pfam	UHGV-0041153_69	PF18994	N/A	N/A	Prophage endopeptidase tail N-terminal domain	Prophage_tailD1
NCBIFam	UHGV-0041153_69	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0041153_69	COG4926	N/A	N/A	Phage-related protein	N/A
PHROG	UHGV-0041153_70	phrog_33	66.3	7.7e-19	distal tail protein Dit	tail
UniRef90	UHGV-0041153_70	UniRef90_A0A173Z1X4	160.0	4.2039e-45	Phage-related protein	N/A
eggNOG-mapper	UHGV-0041153_70	1444306.JFZC01000034_gene2623	77.4	0.0000000000000502	tail component	N/A
NCBIFam	UHGV-0041153_70	TIGR01633.1	N/A	N/A	distal tail protein Dit	N/A
COG	UHGV-0041153_70	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0041153_70	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0041153_71	phrog_4372	800.3	0	tail length tape measure protein	tail
UniRef90	UHGV-0041153_71	UniRef90_D4MRU8	759.0	0	Tape measure domain	N/A
eggNOG-mapper	UHGV-0041153_71	742733.HMPREF9469_05020	722.0	0	phage tail tape measure protein	N/A
Pfam	UHGV-0041153_71	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-0041153_71	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-0041153_71	COG5412	N/A	N/A	Phage-related protein	N/A