Viral Genome: UHGV-0041159


Overview
UHGV ID UHGV-0041159
vOTU ID vOTU-124778
Representative Genome? Yes
Source Hadza
Original genome ID Hadza_PheChl_Fiber-Hadza-Nepal_E_12_1556__NODE_1312_length_57742_cov_5.549137
Associated BioSample N/A
Viral genome confidence Confident

Quality assessment
CheckV method AAI-based
CheckV completeness 74.8 (Medium-quality)
Trimmed provirus No
CheckV viral markers 23
CheckV host markers 1
Recoded stop codon No
Viral Content
geNomad score 0.9736
Virus hallmark genes (geNomad) 3
Plasmid hallmark genes (geNomad) 0
viralVerify prediction Virus
viralVerify score 44.93
Jumbo phage No

Genome content
Genome length (bp) 57,742
GC content 51.64%
Genetic code The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes 91
CDS density 91%
Average CDS length (bps) 575.47
Total tRNA genes 2
Suppressor tRNA genes 0



Genome content

Select to view:   Genome Viewer   Functional Annotation

Genome View (Completeness: 74.8)
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