Viral Genome: UHGV-0041225


Overview
UHGV ID UHGV-0041225
vOTU ID vOTU-147840
Representative Genome? Yes
Source Hadza
Original genome ID Hadza_PheChl_Fiber-Hadza-Nepal_E_16_1654__NODE_840_length_71391_cov_11.017248
Associated BioSample SAMEA11460265
Viral genome confidence Confident

Quality assessment
CheckV method AAI-based
CheckV completeness 89.44 (Medium-quality)
Trimmed provirus No
CheckV viral markers 15
CheckV host markers 2
Recoded stop codon No
Viral Content
geNomad score 0.9777
Virus hallmark genes (geNomad) 4
Plasmid hallmark genes (geNomad) 0
viralVerify prediction Virus
viralVerify score 16.46
Jumbo phage No

Genome content
Genome length (bp) 71,391
GC content 58.74%
Genetic code The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes 112
CDS density 88%
Average CDS length (bps) 560.25
Total tRNA genes 6
Suppressor tRNA genes 0



Genome content

Select to view:   Genome Viewer   Functional Annotation

Genome View (Completeness: 89.44)
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