Overview | |
---|---|
UHGV ID | UHGV-0044524 |
vOTU ID | vOTU-000018 |
Representative Genome? | No |
Source | GPD |
Original genome ID | uvig_16056 |
Associated BioSample | SAMEA2042607 |
Viral genome confidence | Confident |
Quality assessment | |
---|---|
CheckV method | AAI-based |
CheckV completeness | 33.8 (Low-quality) |
Trimmed provirus | No |
CheckV viral markers | 20 |
CheckV host markers | 3 |
Recoded stop codon | Yes |
Viral Content | |
---|---|
geNomad score | 0.9619 |
Virus hallmark genes (geNomad) | 6 |
Plasmid hallmark genes (geNomad) | 0 |
viralVerify prediction | Virus |
viralVerify score | 33.42 |
Jumbo phage | No |
Genome content | |
---|---|
Genome length (bp) | 59,212 |
GC content | 28.96% |
Genetic code | The Mold, Protozoan, and Coelenterate Mitochondrial Code and the Mycoplasma/Spiroplasma Code (4) |
CDS genes | 90 |
CDS density | 93% |
Average CDS length (bps) | 609.03 |
Total tRNA genes | 5 |
Suppressor tRNA genes | 0 |