UHGV-0044918 (vOTU-166949)

Viral Genome: UHGV-0044918

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0044918
vOTU ID	vOTU-166949
Representative Genome?	Yes
Source	GPD
Original genome ID	ivig_2405
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	62.51 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	18
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9768
Virus hallmark genes (geNomad)	8
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	49.35
Jumbo phage	No

Genome content
Genome length (bp)	23,825
GC content	35.89%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	28
CDS density	91%
Average CDS length (bps)	776.79
Total tRNA genes	2
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 62.51)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0044918_1	phrog_248	83.0	4.2e-24	transcriptional activator	transcription regulation
UniRef90	UHGV-0044918_1	UniRef90_S4BVI8	336.0	0	Phage transcriptional regulator, ArpU family	N/A
eggNOG-mapper	UHGV-0044918_1	1158607.UAU_01741	189.0	0	N/A	N/A
NCBIFam	UHGV-0044918_1	TIGR01637.1	N/A	N/A	ArpU family phage packaging/lysis transcriptional regulator	N/A
structural_annotation	UHGV-0044918_1	PF04545,TIGR01637,COG1342	N/A	N/A	N/A	N/A
PHROG	UHGV-0044918_2	phrog_1202	138.3	1.19993e-41	N/A	unknown function
eggNOG-mapper	UHGV-0044918_2	565664.EFXG_01156	114.0	1.52e-32	N/A	N/A
structural_annotation	UHGV-0044918_2	PF18789	N/A	N/A	N/A	N/A
KOfam	UHGV-0044918_3	K07319	118.8	3.1e-35	yhdJ; adenine-specific DNA-methyltransferase [EC:2.1.1.72]	N/A
PHROG	UHGV-0044918_3	phrog_498	489.2	0	DNA methyltransferase	other
UniRef90	UHGV-0044918_3	UniRef90_UPI001158532F	786.0	0	site-specific DNA-methyltransferase	N/A
eggNOG-mapper	UHGV-0044918_3	1104325.M7W_1347	674.0	0	DNA methylase	N/A
PADLOC	UHGV-0044918_3	MTase_II_00015	457.6	0	Type II methyltransferase	RM
Pfam	UHGV-0044918_3	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
Pfam	UHGV-0044918_3	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-0044918_3	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-0044918_3	PF01555,PF02195,MF_02015,MF_01872,NF010253,TIGR04285,COG0863,COG1475	N/A	N/A	N/A	N/A
PHROG	UHGV-0044918_4	phrog_1476	95.6	2.6e-28	N/A	unknown function
eggNOG-mapper	UHGV-0044918_4	1104325.M7W_1348	120.0	6e-35	N/A	N/A
PHROG	UHGV-0044918_5	phrog_1889	290.0	0	terminase small subunit	head and packaging
UniRef90	UHGV-0044918_5	UniRef90_UPI0001F0CBE8	500.0	0	phage terminase small subunit	N/A
eggNOG-mapper	UHGV-0044918_5	673832.D2IYW0_9CAUD	267.0	0	DNA packaging	N/A
Pfam	UHGV-0044918_5	PF06056	N/A	N/A	Putative ATPase subunit of terminase (gpP-like)	Terminase_5
NCBIFam	UHGV-0044918_5	NF040601.1	N/A	N/A	phage terminase small subunit	N/A
structural_annotation	UHGV-0044918_5	PF10668,NF040601,COG5484	N/A	N/A	N/A	N/A
PHROG	UHGV-0044918_6	phrog_29775	252.3	0	N/A	unknown function
UniRef90	UHGV-0044918_6	UniRef90_U6S3B8	819.0	0	Phage terminase, large subunit, PBSX family	N/A
eggNOG-mapper	UHGV-0044918_6	1229517.AMFD01000018_gene188	591.0	0	Phage terminase, large subunit, PBSX family	N/A
NCBIFam	UHGV-0044918_6	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0044918_6	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0044918_6	PF04466,PF20441,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0044918_7	phrog_533	594.6	0	portal protein	head and packaging
UniRef90	UHGV-0044918_7	UniRef90_A0A2N8PYJ9	814.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0044918_7	1158601.I585_01160	792.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0044918_7	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
NCBIFam	UHGV-0044918_7	TIGR01542.1	N/A	N/A	phage portal protein	N/A
structural_annotation	UHGV-0044918_7	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0044918_8	phrog_581	366.0	0	minor head protein	head and packaging
UniRef90	UHGV-0044918_8	UniRef90_A0A7Z8WPA9	764.0	0	Capsid protein	N/A
eggNOG-mapper	UHGV-0044918_8	1158601.I585_01158	667.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-0044918_8	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0044918_8	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0044918_8	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-0044918_9	phrog_8550	109.4	1.3e-32	N/A	unknown function
PHROG	UHGV-0044918_10	phrog_194	145.5	3.50325e-43	head scaffolding protein	head and packaging
UniRef90	UHGV-0044918_10	UniRef90_V7ZRB5	292.0	0	Capsid protein	N/A
eggNOG-mapper	UHGV-0044918_10	768486.EHR_02625	205.0	0	Phage minor structural protein GP20	N/A
Pfam	UHGV-0044918_10	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-0044918_10	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0044918_11	phrog_422	254.5	0	major head protein	head and packaging
UniRef90	UHGV-0044918_11	UniRef90_V7ZS76	550.0	0	Capsid protein	N/A
eggNOG-mapper	UHGV-0044918_11	1158601.I585_01156	512.0	0	N/A	N/A
structural_annotation	UHGV-0044918_11	PF19821,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0044918_12	phrog_541	128.5	2.9e-38	head-tail adaptor	connector
UniRef90	UHGV-0044918_12	UniRef90_I6SVS1	172.0	0	Protein gp8	N/A
eggNOG-mapper	UHGV-0044918_12	1234679.BN424_2621	199.0	0	N/A	N/A
PHROG	UHGV-0044918_13	phrog_793	119.1	2e-35	head-tail adaptor	connector
UniRef90	UHGV-0044918_13	UniRef90_A0A4S2CEY0	182.0	0	Minor capsid protein	N/A
eggNOG-mapper	UHGV-0044918_13	768486.EHR_02605	187.0	0	Minor capsid protein	N/A
Pfam	UHGV-0044918_13	PF10665	N/A	N/A	Minor capsid protein	Minor_capsid_1
structural_annotation	UHGV-0044918_13	PF10665,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0044918_14	phrog_556	91.9	5.7e-27	minor head protein	head and packaging
UniRef90	UHGV-0044918_14	UniRef90_V7ZQV6	215.0	0	Capsid protein	N/A
eggNOG-mapper	UHGV-0044918_14	1158601.I585_01153	176.0	0	Minor capsid protein	N/A
Pfam	UHGV-0044918_14	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0044918_14	PF11114,TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-0044918_15	phrog_913	149.5	9.80909e-45	minor head protein	head and packaging
UniRef90	UHGV-0044918_15	UniRef90_V7ZRB1	265.0	0	Capsid protein	N/A
eggNOG-mapper	UHGV-0044918_15	768486.EHR_02595	203.0	0	Minor capsid protein from bacteriophage	N/A
Pfam	UHGV-0044918_15	PF12691	N/A	N/A	Bacteriophage minor capsid protein	Minor_capsid_3
structural_annotation	UHGV-0044918_15	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0044918_16	phrog_820	185.1	0	major tail protein	tail
UniRef90	UHGV-0044918_16	UniRef90_A0A8I1FBJ6	314.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-0044918_16	768486.EHR_02590	253.0	0	N/A	N/A
structural_annotation	UHGV-0044918_16	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0044918_17	phrog_341	142.8	1.80067e-42	major tail protein	tail
UniRef90	UHGV-0044918_17	UniRef90_UPI000A191C1D	270.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-0044918_17	1486428.A0A097BY60_9CAUD	215.0	0	peptidase activity	N/A
structural_annotation	UHGV-0044918_17	PF02368,MF_04116,TIGR04225,COG5492	N/A	N/A	N/A	N/A
PHROG	UHGV-0044918_18	phrog_1061	123.6	1.2e-36	N/A	unknown function
eggNOG-mapper	UHGV-0044918_18	1158601.I585_01150	130.0	4.22e-37	N/A	N/A
structural_annotation	UHGV-0044918_18	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-0044918_19	phrog_706	178.3	0	N/A	unknown function
UniRef90	UHGV-0044918_19	UniRef90_A0A828QPX0	244.0	0	Bacteriophage Gp15 protein	N/A
eggNOG-mapper	UHGV-0044918_19	1158601.I585_01149	219.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0044918_19	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0044918_19	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0044918_20	phrog_1686	349.0	0	tail length tape measure protein	tail
UniRef90	UHGV-0044918_20	UniRef90_A0A7Z8WRF8	1293.0	0	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-0044918_20	1140003.I573_01294	305.0	0	phage tail tape measure protein	N/A
Pfam	UHGV-0044918_20	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-0044918_20	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-0044918_20	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
structural_annotation	UHGV-0044918_20	PF10145,TIGR01760	N/A	N/A	N/A	N/A
PHROG	UHGV-0044918_21	phrog_33	76.6	5.5e-22	distal tail protein Dit	tail
UniRef90	UHGV-0044918_21	UniRef90_V7ZMX6	514.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-0044918_21	1158601.I585_01147	341.0	0	phage tail	N/A
NCBIFam	UHGV-0044918_21	TIGR01633.1	N/A	N/A	distal tail protein Dit	N/A
COG	UHGV-0044918_21	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0044918_21	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0044918_22	phrog_1067	454.9	0	minor head protein	head and packaging
UniRef90	UHGV-0044918_22	UniRef90_UPI001CE19E69	1399.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-0044918_22	1158601.I585_01146	928.0	0	Prophage endopeptidase tail	N/A
Pfam	UHGV-0044918_22	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
Pfam	UHGV-0044918_22	PF13884	N/A	N/A	Chaperone of endosialidase	Peptidase_S74
NCBIFam	UHGV-0044918_22	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0044918_22	COG4926	N/A	N/A	Phage-related protein	N/A
PHROG	UHGV-0044918_23	phrog_1665	354.1	0	N/A	unknown function
UniRef90	UHGV-0044918_23	UniRef90_UPI0010BFC969	920.0	0	BppU family phage baseplate upper protein	N/A
eggNOG-mapper	UHGV-0044918_23	673832.D2IYX9_9CAUD	639.0	0	N/A	N/A
Pfam	UHGV-0044918_23	PF10651	N/A	N/A	BppU N-terminal domain	BppU_N
structural_annotation	UHGV-0044918_23	PF10651	N/A	N/A	N/A	N/A
PHROG	UHGV-0044918_24	phrog_199	67.0	2.4e-19	holin	lysis
UniRef90	UHGV-0044918_24	UniRef90_A0A097BY69	254.0	0	Holin	N/A
eggNOG-mapper	UHGV-0044918_24	1486428.A0A097BY69_9CAUD	254.0	0	Pfam:Phage_holin_4_1	N/A
Pfam	UHGV-0044918_24	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-0044918_24	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
KOfam	UHGV-0044918_25	K01447	48.0	0.00000000000023	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0044918_25	phrog_670	206.9	0	endolysin	lysis
UniRef90	UHGV-0044918_25	UniRef90_A0A097BY70	567.0	0	Lysin	N/A
eggNOG-mapper	UHGV-0044918_25	1486428.A0A097BY70_9CAUD	567.0	0	peptidoglycan catabolic process	N/A
Pfam	UHGV-0044918_25	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
structural_annotation	UHGV-0044918_25	PF01510,MF_04111,COG5632	N/A	N/A	N/A	N/A
PHROG	UHGV-0044918_26	phrog_1281	125.1	3.5e-37	N/A	unknown function
UniRef90	UHGV-0044918_26	UniRef90_R3J5A1	322.0	0	N/A	N/A
eggNOG-mapper	UHGV-0044918_26	2110.MAGa3150	186.0	0	N/A	N/A
Pfam	UHGV-0044918_26	PF13274	N/A	N/A	Antitoxin SocA-like, Panacea domain	SocA_Panacea
COG	UHGV-0044918_26	COG3600	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0044918_26	PF13274,COG3600	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0044918_27	1121947.AUHK01000002_gene953	88.6	1.56e-21	N/A	N/A