UHGV-0046751 (vOTU-165683)

Viral Genome: UHGV-0046751

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0046751
vOTU ID	vOTU-165683
Representative Genome?	Yes
Source	GPD
Original genome ID	ivig_3122
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	HMM-based
CheckV completeness	50.23 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	14
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9705
Virus hallmark genes (geNomad)	5
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	20.96
Jumbo phage	No

Genome content
Genome length (bp)	27,806
GC content	34.12%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	32
CDS density	90%
Average CDS length (bps)	785.72
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 50.23)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-0046751_1	UniRef90_UPI00058E2615	556.0	0	PIN domain-containing protein	N/A
eggNOG-mapper	UHGV-0046751_1	1499683.CCFF01000017_gene2915	556.0	0	N/A	N/A
Pfam	UHGV-0046751_1	PF16289	N/A	N/A	PIN domain	PIN_12
eggNOG-mapper	UHGV-0046751_2	1499683.CCFF01000017_gene2916	173.0	0	N/A	N/A
KOfam	UHGV-0046751_3	K01448	176.0	0	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0046751_3	phrog_435	154.8	0	endolysin	lysis
UniRef90	UHGV-0046751_3	UniRef90_UPI0006933531	522.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-0046751_3	1499683.CCFF01000017_gene2917	522.0	0	Ami_3	N/A
Pfam	UHGV-0046751_3	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
Pfam	UHGV-0046751_3	PF08239	N/A	N/A	Bacterial SH3 domain	SH3_3
COG	UHGV-0046751_3	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0046751_3	PF01520,PF18342,MF_00562,TIGR02883,COG0860,COG4991	N/A	N/A	N/A	N/A
PHROG	UHGV-0046751_5	phrog_2712	51.4	0.000000000000021	tail fiber protein	tail
eggNOG-mapper	UHGV-0046751_5	1499683.CCFF01000017_gene2919	1637.0	0	N/A	N/A
PHROG	UHGV-0046751_6	phrog_6616	124.0	1.2e-36	tail protein	tail
eggNOG-mapper	UHGV-0046751_6	1499683.CCFF01000017_gene2920	1508.0	0	Phage minor structural protein	N/A
COG	UHGV-0046751_6	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0046751_6	PF06605,PF18994,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0046751_7	phrog_1194	111.2	5.8e-33	N/A	unknown function
UniRef90	UHGV-0046751_7	UniRef90_A0A4U9RD70	105.0	6.51e-27	Lj965 prophage protein	N/A
eggNOG-mapper	UHGV-0046751_7	1499683.CCFF01000017_gene2921	233.0	0	N/A	N/A
Pfam	UHGV-0046751_7	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-0046751_7	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
UniRef90	UHGV-0046751_8	UniRef90_UPI00136915AA	199.0	0	serine/threonine protein kinase	N/A
eggNOG-mapper	UHGV-0046751_8	1499683.CCFF01000017_gene2922	461.0	0	serine threonine protein kinase	N/A
COG	UHGV-0046751_8	COG0515	N/A	N/A	Serine/threonine protein kinase	N/A
PHROG	UHGV-0046751_9	phrog_1535	308.1	0	tail length tape measure protein	tail
UniRef90	UHGV-0046751_9	UniRef90_A0A1M6MXK4	350.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0046751_9	1499683.CCFF01000017_gene2923	1778.0	0	phage tail tape measure protein	N/A
COG	UHGV-0046751_9	COG1280	N/A	N/A	Threonine/homoserine/homoserine lactone efflux protein	N/A
PHROG	UHGV-0046751_10	phrog_2066	73.2	3.3e-21	N/A	unknown function
eggNOG-mapper	UHGV-0046751_10	1499683.CCFF01000017_gene2924	250.0	0	N/A	N/A
PHROG	UHGV-0046751_11	phrog_183	60.0	4.7e-17	tail chaperone protein	tail
UniRef90	UHGV-0046751_11	UniRef90_UPI0005AA54D3	224.0	0	N/A	N/A
eggNOG-mapper	UHGV-0046751_11	1499683.CCFF01000017_gene2925	224.0	0	N/A	N/A
Pfam	UHGV-0046751_11	PF19591	N/A	N/A	N/A	DUF6096
structural_annotation	UHGV-0046751_11	PF19591	N/A	N/A	N/A	N/A
PHROG	UHGV-0046751_12	phrog_158	74.5	2.3e-21	major tail protein	tail
UniRef90	UHGV-0046751_12	UniRef90_UPI0005906553	272.0	0	tail protein	N/A
eggNOG-mapper	UHGV-0046751_12	1499683.CCFF01000017_gene2926	272.0	0	Phage tail tube protein, TTP	N/A
Pfam	UHGV-0046751_12	PF08813	N/A	N/A	Phage tail tube protein, TTP	Phage_tail_3
structural_annotation	UHGV-0046751_12	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0046751_13	phrog_78	52.4	0.000000000000011	tail terminator	connector
eggNOG-mapper	UHGV-0046751_13	574376.BAMA_22670	55.5	0.0000000315	N/A	N/A
structural_annotation	UHGV-0046751_13	PF09646,COG3167	N/A	N/A	N/A	N/A
PHROG	UHGV-0046751_14	phrog_5	84.8	1.5e-24	tail completion or Neck1 protein	connector
UniRef90	UHGV-0046751_14	UniRef90_UPI00058C419E	216.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0046751_14	1499683.CCFF01000017_gene2928	216.0	0	Bacteriophage HK97-gp10, putative tail-component	N/A
Pfam	UHGV-0046751_14	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
NCBIFam	UHGV-0046751_14	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
eggNOG-mapper	UHGV-0046751_15	1499683.CCFF01000017_gene2929	199.0	0	N/A	N/A
structural_annotation	UHGV-0046751_15	PF12206,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0046751_16	phrog_132	42.4	0.000000000012	head-tail adaptor	connector
UniRef90	UHGV-0046751_16	UniRef90_UPI00058F125B	198.0	0	phage head-tail connector protein	N/A
eggNOG-mapper	UHGV-0046751_16	1499683.CCFF01000017_gene2930	198.0	0	Phage gp6-like head-tail connector protein	N/A
Pfam	UHGV-0046751_16	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
structural_annotation	UHGV-0046751_16	PF05135,TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-0046751_17	phrog_422	185.2	0	major head protein	head and packaging
UniRef90	UHGV-0046751_17	UniRef90_UPI000422DE56	380.0	0	N4-gp56 family major capsid protein	N/A
eggNOG-mapper	UHGV-0046751_17	1499683.CCFF01000017_gene2931	525.0	0	N/A	N/A
structural_annotation	UHGV-0046751_17	PF19821,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0046751_18	phrog_172	85.6	8.5e-25	head scaffolding protein	head and packaging
UniRef90	UHGV-0046751_18	UniRef90_UPI00058DC1AE	310.0	0	N/A	N/A
eggNOG-mapper	UHGV-0046751_18	1499683.CCFF01000017_gene2932	310.0	0	N/A	N/A
Pfam	UHGV-0046751_18	PF14265	N/A	N/A	N/A	DUF4355
PHROG	UHGV-0046751_20	phrog_64	398.9	0	portal protein	head and packaging
UniRef90	UHGV-0046751_20	UniRef90_UPI000590597B	870.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-0046751_20	1499683.CCFF01000017_gene2934	870.0	0	Phage portal protein, SPP1 family	N/A
Pfam	UHGV-0046751_20	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
NCBIFam	UHGV-0046751_20	TIGR01538.1	N/A	N/A	phage portal protein	N/A
structural_annotation	UHGV-0046751_20	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0046751_21	K06909	365.7	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0046751_21	phrog_3717	251.0	0	terminase large subunit	head and packaging
UniRef90	UHGV-0046751_21	UniRef90_UPI000AE34C96	805.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0046751_21	1499683.CCFF01000017_gene2935	805.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-0046751_21	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-0046751_21	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-0046751_21	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0046751_21	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0046751_21	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
KOfam	UHGV-0046751_22	K07474	97.2	3.5e-28	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-0046751_22	phrog_51	101.4	4e-31	terminase small subunit	head and packaging
UniRef90	UHGV-0046751_22	UniRef90_UPI00058E2CE1	234.0	0	terminase small subunit	N/A
eggNOG-mapper	UHGV-0046751_22	1499683.CCFF01000017_gene2936	234.0	0	Terminase small subunit	N/A
Pfam	UHGV-0046751_22	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-0046751_22	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0046751_22	PF03592,COG3728	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0046751_25	1499683.CCFF01000017_gene2939	441.0	0	N/A	N/A
eggNOG-mapper	UHGV-0046751_27	1499683.CCFF01000017_gene2941	616.0	0	N/A	N/A
PHROG	UHGV-0046751_29	phrog_391	55.8	0.000000000000001	replication initiation O-like	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0046751_29	UniRef90_UPI000590C4AD	589.0	0	helix-turn-helix domain-containing protein	N/A
Pfam	UHGV-0046751_29	PF13730	N/A	N/A	Helix-turn-helix domain	HTH_36
UniRef90	UHGV-0046751_31	UniRef90_UPI0009DDB91D	97.8	5.71e-26	ribbon-helix-helix protein, CopG family	N/A
Pfam	UHGV-0046751_31	PF07878	N/A	N/A	CopG-like RHH_1 or ribbon-helix-helix domain, RHH_5	RHH_5