UHGV-0047085 (vOTU-038547)

Viral Genome: UHGV-0047085

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0047085
vOTU ID	vOTU-038547
Representative Genome?	Yes
Source	GPD
Original genome ID	uvig_20703
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	60.04 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	13
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9803
Virus hallmark genes (geNomad)	6
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	29.88
Jumbo phage	No

Genome content
Genome length (bp)	35,799
GC content	38.92%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	57
CDS density	88%
Average CDS length (bps)	551.63
Total tRNA genes	4
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 60.04)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0047085_2	phrog_18444	85.3	4e-25	N/A	unknown function
UniRef90	UHGV-0047085_2	UniRef90_UPI00156E9A45	92.4	2.59e-23	peptide chain release factor 2	N/A
eggNOG-mapper	UHGV-0047085_2	1294142.CINTURNW_1043	51.6	0.0000000608	N/A	N/A
PHROG	UHGV-0047085_3	phrog_6616	625.3	0	tail protein	tail
UniRef90	UHGV-0047085_3	UniRef90_A0A1C5RZB4	512.0	0	Peptidase S74 domain-containing protein	N/A
eggNOG-mapper	UHGV-0047085_3	1121866.AUGK01000003_gene1439	309.0	0	Phage minor structural protein	N/A
COG	UHGV-0047085_3	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0047085_3	PF05954,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-0047085_4	phrog_1194	116.5	1.3e-34	N/A	unknown function
eggNOG-mapper	UHGV-0047085_4	1158607.UAU_01771	76.6	2.17e-16	N/A	N/A
Pfam	UHGV-0047085_4	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-0047085_4	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0047085_5	phrog_167	418.7	0	tail length tape measure protein	tail
UniRef90	UHGV-0047085_5	UniRef90_A0A396PS29	1301.0	0	SLT domain-containing protein	N/A
eggNOG-mapper	UHGV-0047085_5	397290.C810_01419	389.0	0	Transglycosylase SLT domain	N/A
Pfam	UHGV-0047085_5	PF01464	N/A	N/A	Transglycosylase SLT domain	SLT
COG	UHGV-0047085_5	COG1280	N/A	N/A	Threonine/homoserine/homoserine lactone efflux protein	N/A
PHROG	UHGV-0047085_8	phrog_158	49.5	0.000000000000085	major tail protein	tail
UniRef90	UHGV-0047085_8	UniRef90_A0A173S6H2	219.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-0047085_8	1232453.BAIF02000058_gene1634	143.0	3.67981e-42	N/A	N/A
Pfam	UHGV-0047085_8	PF08813	N/A	N/A	Phage tail tube protein, TTP	Phage_tail_3
structural_annotation	UHGV-0047085_8	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0047085_9	PF06141,TIGR02367,COG3167	N/A	N/A	N/A	N/A
PHROG	UHGV-0047085_10	phrog_5	41.2	0.000000000037	tail completion or Neck1 protein	connector
UniRef90	UHGV-0047085_10	UniRef90_UPI001BBD4500	212.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0047085_10	397290.C810_01411	103.0	1.35e-25	N/A	N/A
AcrCatalog	UHGV-0047085_10	cluster_24841	72.4	4.62e-18	NA	N/A
structural_annotation	UHGV-0047085_10	PF17395,TIGR01725	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0047085_11	1232453.BAIF02000058_gene1630	127.0	3.12e-36	N/A	N/A
structural_annotation	UHGV-0047085_11	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0047085_12	397290.C810_01402	79.0	1.67e-17	N/A	N/A
Pfam	UHGV-0047085_12	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
PHROG	UHGV-0047085_13	phrog_1328	114.2	7e-34	major head protein	head and packaging
UniRef90	UHGV-0047085_13	UniRef90_UPI001D096CC5	534.0	0	N/A	N/A
eggNOG-mapper	UHGV-0047085_13	665956.HMPREF1032_03619	220.0	0	N/A	N/A
Pfam	UHGV-0047085_13	PF17236	N/A	N/A	N/A	DUF5309
Pfam	UHGV-0047085_13	PF18316	N/A	N/A	S-layer protein SbsC C-terminal domain	S-l_SbsC_C
structural_annotation	UHGV-0047085_13	PF17236,PF18316,MF_04133,NF041162,COG4653	N/A	N/A	N/A	N/A
UniRef90	UHGV-0047085_14	UniRef90_A0A7C7EK05	90.5	3.24e-19	N/A	N/A
PHROG	UHGV-0047085_15	phrog_64	201.9	0	portal protein	head and packaging
UniRef90	UHGV-0047085_15	UniRef90_UPI00156EA9F5	753.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-0047085_15	1121866.AUGK01000003_gene1429	228.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0047085_15	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0047085_15	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
UniRef90	UHGV-0047085_16	UniRef90_A0A173S6N5	238.0	0	RNA polymerase sigma factor, sigma-70 family	N/A
eggNOG-mapper	UHGV-0047085_16	1232453.BAIF02000058_gene1624	134.0	2.17e-38	N/A	N/A
structural_annotation	UHGV-0047085_16	PF04545,MF_00245,TIGR01636,COG2739	N/A	N/A	N/A	N/A
PHROG	UHGV-0047085_17	phrog_38	147.5	9.94922e-44	terminase large subunit	head and packaging
UniRef90	UHGV-0047085_17	UniRef90_A0A415D4U9	892.0	0	DOD-type homing endonuclease domain-containing protein	N/A
eggNOG-mapper	UHGV-0047085_17	1298920.KI911353_gene2682	759.0	0	TIGRFAM Phage	N/A
COG	UHGV-0047085_17	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0047085_17	PF17289,PF04466,MF_04147,NF033889,COG5410,COG5362	N/A	N/A	N/A	N/A
UniRef90	UHGV-0047085_19	UniRef90_A0A3E3JYB1	92.4	1.78e-23	Conjugal transfer protein	N/A
Pfam	UHGV-0047085_19	PF14205	N/A	N/A	Cysteine-rich KTR	Cys_rich_KTR
structural_annotation	UHGV-0047085_19	PF14205	N/A	N/A	N/A	N/A
PHROG	UHGV-0047085_20	phrog_918	96.2	1.8e-28	N/A	unknown function
UniRef90	UHGV-0047085_20	UniRef90_UPI00189D39C2	170.0	0	N/A	N/A
eggNOG-mapper	UHGV-0047085_20	1256908.HMPREF0373_00480	172.0	0	N/A	N/A
Pfam	UHGV-0047085_20	PF19791	N/A	N/A	N/A	DUF6275
structural_annotation	UHGV-0047085_20	PF19791	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0047085_21	COG4446	N/A	N/A	N/A	N/A
PHROG	UHGV-0047085_23	phrog_355	56.1	5.8e-16	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0047085_23	UniRef90_A0A396KGT7	207.0	0	N/A	N/A
eggNOG-mapper	UHGV-0047085_23	97138.C820_00250	127.0	5.59e-37	N/A	N/A
Pfam	UHGV-0047085_23	PF14359	N/A	N/A	N/A	DUF4406
structural_annotation	UHGV-0047085_23	PF14359,COG3613	N/A	N/A	N/A	N/A
PHROG	UHGV-0047085_25	phrog_1048	161.4	0	N/A	unknown function
UniRef90	UHGV-0047085_25	UniRef90_UPI001C01A84D	330.0	0	N/A	N/A
eggNOG-mapper	UHGV-0047085_25	457412.RSAG_01107	248.0	0	N/A	N/A
Pfam	UHGV-0047085_25	PF11195	N/A	N/A	N/A	DUF2829
dbAPIS	UHGV-0047085_25	APIS029	N/A	N/A	Tad2 is a "sponge" that sequesters the immune signaling molecules produced by Thoeris TIR-domain proteins in response to phage.	N/A
structural_annotation	UHGV-0047085_25	PF11195	N/A	N/A	N/A	N/A
PHROG	UHGV-0047085_28	phrog_1233	83.3	3.3e-24	N/A	unknown function
UniRef90	UHGV-0047085_28	UniRef90_UPI001C39EFB9	145.0	8.43582e-43	Dienelactone hydrolase family protein	N/A
eggNOG-mapper	UHGV-0047085_28	1415774.U728_832	102.0	1.28e-26	N/A	N/A
structural_annotation	UHGV-0047085_31	PF06004,NF033216,COG4568	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0047085_32	476272.RUMHYD_01907	86.3	3.31e-18	N/A	N/A
eggNOG-mapper	UHGV-0047085_34	1235793.C809_04605	67.4	0.00000000000000911	N/A	N/A
PHROG	UHGV-0047085_35	phrog_31631	60.3	2.2e-17	N/A	unknown function
UniRef90	UHGV-0047085_38	UniRef90_A0A893WAT2	628.0	0	J domain-containing protein	N/A
eggNOG-mapper	UHGV-0047085_38	500632.CLONEX_04013	474.0	0	DnaJ molecular chaperone homology domain	N/A
Pfam	UHGV-0047085_38	PF18847	N/A	N/A	Large polyvalent protein associated domain 29	LPD29
COG	UHGV-0047085_38	COG2214	N/A	N/A	Curved DNA-binding protein CbpA, contains a DnaJ-like domain	N/A
structural_annotation	UHGV-0047085_38	PF18847	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0047085_41	397290.C810_01347	46.6	0.00000454	N/A	N/A
structural_annotation	UHGV-0047085_41	PF18267	N/A	N/A	N/A	N/A
PHROG	UHGV-0047085_44	phrog_229	118.7	3.2e-35	MazG-like pyrophosphatase	other
UniRef90	UHGV-0047085_44	UniRef90_A0A173S9L2	257.0	0	MazG nucleotide pyrophosphohydrolase domain	N/A
eggNOG-mapper	UHGV-0047085_44	428125.CLOLEP_01391	98.2	9.57e-25	MazG nucleotide pyrophosphohydrolase domain	N/A
Pfam	UHGV-0047085_44	PF03819	N/A	N/A	MazG nucleotide pyrophosphohydrolase domain	MazG
COG	UHGV-0047085_44	COG1694	N/A	N/A	NTP pyrophosphatase, house-cleaning of non-canonical NTPs	N/A
structural_annotation	UHGV-0047085_44	PF03819,MF_01020,TIGR03188,COG1694	N/A	N/A	N/A	N/A
PHROG	UHGV-0047085_46	phrog_98	80.7	1.9e-23	N/A	unknown function
UniRef90	UHGV-0047085_46	UniRef90_A0A396Q2T7	215.0	0	YopX domain-containing protein	N/A
eggNOG-mapper	UHGV-0047085_46	1235800.C819_02639	111.0	1.52e-29	YopX protein	N/A
Pfam	UHGV-0047085_46	PF09643	N/A	N/A	YopX protein	YopX
NCBIFam	UHGV-0047085_46	TIGR01671.1	N/A	N/A	phage conserved hypothetical protein TIGR01671	N/A
structural_annotation	UHGV-0047085_46	PF09643,TIGR01671	N/A	N/A	N/A	N/A
PHROG	UHGV-0047085_47	phrog_22292	102.3	3.9e-30	N/A	unknown function
PHROG	UHGV-0047085_48	phrog_20593	83.6	1.3e-24	N/A	unknown function
eggNOG-mapper	UHGV-0047085_48	483218.BACPEC_01161	61.6	0.00000000126	N/A	N/A
PHROG	UHGV-0047085_49	phrog_599	48.2	0.00000000000025	Lar-like restriction alleviation protein	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0047085_49	UniRef90_A0A173SAG0	169.0	0	Restriction alleviation protein, Lar family	N/A
eggNOG-mapper	UHGV-0047085_49	97139.C824_00027	60.5	0.0000000000371	Restriction alleviation protein Lar	N/A
Pfam	UHGV-0047085_49	PF14354	N/A	N/A	Restriction alleviation protein Lar	Lar_restr_allev
NCBIFam	UHGV-0047085_49	TIGR03655.1	N/A	N/A	Lar family restriction alleviation protein	N/A
structural_annotation	UHGV-0047085_49	PF14354	N/A	N/A	N/A	N/A
UniRef90	UHGV-0047085_50	UniRef90_UPI000CFA530D	60.5	0.00000000127	N/A	N/A
Pfam	UHGV-0047085_50	PF04448	N/A	N/A	N/A	DUF551
PHROG	UHGV-0047085_51	phrog_25456	46.9	2.5e-16	N/A	unknown function
structural_annotation	UHGV-0047085_52	PF06442,MF_01194,NF000331,COG4014	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0047085_54	PF17400	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0047085_55	1415774.U728_858	157.0	0	N/A	N/A
KOfam	UHGV-0047085_57	K00390	43.4	0.0000000000055	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	N/A
PHROG	UHGV-0047085_57	phrog_424	49.5	0.000000000000087	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0047085_57	UniRef90_UPI0006DCB293	130.0	1.48e-37	phosphoadenosine phosphosulfate reductase family protein	N/A
eggNOG-mapper	UHGV-0047085_57	1232452.BAIB02000007_gene1640	122.0	2.83e-33	Phosphoadenosine phosphosulfate reductase	N/A
Pfam	UHGV-0047085_57	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-0047085_57	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A