Overview | |
---|---|
UHGV ID | UHGV-0052978 |
vOTU ID | vOTU-000640 |
Representative Genome? | No |
Source | GPD |
Original genome ID | uvig_58509 |
Associated BioSample | SAMEA2338653 |
Viral genome confidence | Confident |
Quality assessment | |
---|---|
CheckV method | AAI-based |
CheckV completeness | 80.65 (Medium-quality) |
Trimmed provirus | Yes |
CheckV viral markers | 17 |
CheckV host markers | 3 |
Recoded stop codon | No |
Viral Content | |
---|---|
geNomad score | 0.9774 |
Virus hallmark genes (geNomad) | 14 |
Plasmid hallmark genes (geNomad) | 0 |
viralVerify prediction | Virus |
viralVerify score | 34.87 |
Jumbo phage | No |
Genome content | |
---|---|
Genome length (bp) | 41,952 |
GC content | 55.26% |
Genetic code | The Standard Bacterial, Archaeal and Plant Plastid Code (11) |
CDS genes | 60 |
CDS density | 89% |
Average CDS length (bps) | 621.90 |
Total tRNA genes | 0 |
Suppressor tRNA genes | 0 |