UHGV-0057871 (vOTU-040363)

Viral Genome: UHGV-0057871

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0057871
vOTU ID	vOTU-040363
Representative Genome?	Yes
Source	GPD
Original genome ID	uvig_47973
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	86.45 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	20
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9768
Virus hallmark genes (geNomad)	9
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	32.71
Jumbo phage	No

Genome content
Genome length (bp)	32,634
GC content	36.46%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	48
CDS density	91%
Average CDS length (bps)	621.25
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 86.45)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0057871_1	K02395	116.6	3.6e-34	flgJ; peptidoglycan hydrolase FlgJ	N/A
PHROG	UHGV-0057871_1	phrog_3513	175.6	0	endolysin	lysis
UniRef90	UHGV-0057871_1	UniRef90_A0A3D5LQR9	518.0	0	Muramidase (Flagellum-specific)	N/A
eggNOG-mapper	UHGV-0057871_1	411902.CLOBOL_03862	216.0	0	COG NOG16320 non supervised orthologous group	N/A
Pfam	UHGV-0057871_1	PF01832	N/A	N/A	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase	Glucosaminidase
COG	UHGV-0057871_1	COG1705	N/A	N/A	Flagellum-specific peptidoglycan hydrolase FlgJ	N/A
structural_annotation	UHGV-0057871_1	PF01157,MF_01354,NF009358,NF003303,COG1705,COG2139	N/A	N/A	N/A	N/A
PHROG	UHGV-0057871_2	phrog_199	54.9	0.0000000000000012	holin	lysis
UniRef90	UHGV-0057871_2	UniRef90_A0A3D5LQS4	306.0	0	Holin	N/A
eggNOG-mapper	UHGV-0057871_2	411470.RUMGNA_02086	171.0	0	N/A	N/A
Pfam	UHGV-0057871_2	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-0057871_2	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
COG	UHGV-0057871_2	COG4824	N/A	N/A	Phage-related holin (Lysis protein)	N/A
structural_annotation	UHGV-0057871_2	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
PHROG	UHGV-0057871_3	phrog_2566	45.6	0.0000000000011	N/A	unknown function
eggNOG-mapper	UHGV-0057871_3	702450.CUW_0544	48.5	0.00000175	N/A	N/A
PHROG	UHGV-0057871_4	phrog_6616	160.4	0	tail protein	tail
UniRef90	UHGV-0057871_4	UniRef90_UPI001BA4B99A	176.0	4.13005e-41	tail fiber domain-containing protein	N/A
eggNOG-mapper	UHGV-0057871_4	552396.HMPREF0863_01647	143.0	1.68e-31	Phage minor structural protein	N/A
COG	UHGV-0057871_4	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0057871_4	PF14594,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-0057871_5	phrog_1401	58.1	1.5e-16	N/A	unknown function
UniRef90	UHGV-0057871_5	UniRef90_UPI001A9A8A65	76.3	0.00000000000000333	N/A	N/A
eggNOG-mapper	UHGV-0057871_5	1391647.AVSV01000003_gene1820	78.6	7.02e-17	N/A	N/A
structural_annotation	UHGV-0057871_5	PF07761	N/A	N/A	N/A	N/A
PHROG	UHGV-0057871_6	phrog_1194	76.5	3.1e-22	N/A	unknown function
eggNOG-mapper	UHGV-0057871_6	33035.JPJF01000093_gene2242	154.0	0	N/A	N/A
structural_annotation	UHGV-0057871_6	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0057871_7	phrog_1535	326.4	0	tail length tape measure protein	tail
UniRef90	UHGV-0057871_7	UniRef90_A0A1C6JZ05	484.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0057871_7	33035.JPJF01000093_gene2243	526.0	0	phage tail tape measure protein	N/A
COG	UHGV-0057871_7	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-0057871_7	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0057871_8	phrog_8355	101.1	3.7e-30	N/A	unknown function
UniRef90	UHGV-0057871_8	UniRef90_UPI0006BBA9AA	143.0	9.59049e-42	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-0057871_8	394503.Ccel_3036	116.0	8.28e-32	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0057871_8	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0057871_8	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0057871_9	phrog_8300	71.8	7.5e-21	N/A	unknown function
eggNOG-mapper	UHGV-0057871_9	1151292.QEW_2425	70.1	0.0000000000000379	N/A	N/A
structural_annotation	UHGV-0057871_9	PF06896	N/A	N/A	N/A	N/A
PHROG	UHGV-0057871_10	phrog_820	112.7	2.5e-33	major tail protein	tail
UniRef90	UHGV-0057871_10	UniRef90_T3DDR1	182.0	0	Phage major tail 2 family protein	N/A
eggNOG-mapper	UHGV-0057871_10	1151292.QEW_2426	182.0	0	N/A	N/A
structural_annotation	UHGV-0057871_10	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0057871_11	phrog_2595	87.2	1.7e-25	head-tail connector protein	connector
UniRef90	UHGV-0057871_11	UniRef90_UPI001D068DAC	139.0	4.5e-40	minor capsid protein	N/A
eggNOG-mapper	UHGV-0057871_11	742740.HMPREF9474_03510	131.0	1.17e-37	N/A	N/A
Pfam	UHGV-0057871_11	PF12691	N/A	N/A	Bacteriophage minor capsid protein	Minor_capsid_3
structural_annotation	UHGV-0057871_11	PF12691,COG5003	N/A	N/A	N/A	N/A
PHROG	UHGV-0057871_12	phrog_556	50.2	0.000000000000039	minor head protein	head and packaging
eggNOG-mapper	UHGV-0057871_12	483218.BACPEC_01151	132.0	3.99e-38	N/A	N/A
PHROG	UHGV-0057871_13	phrog_8710	136.2	9.40005e-41	N/A	unknown function
eggNOG-mapper	UHGV-0057871_13	742740.HMPREF9474_03508	127.0	8.63e-37	N/A	N/A
structural_annotation	UHGV-0057871_13	PF10665,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0057871_14	phrog_541	68.0	1.4e-19	head-tail adaptor	connector
eggNOG-mapper	UHGV-0057871_14	33035.JPJF01000093_gene2250	145.0	3.09687e-43	N/A	N/A
PHROG	UHGV-0057871_15	phrog_422	258.6	0	major head protein	head and packaging
UniRef90	UHGV-0057871_15	UniRef90_A0A3D5M0U8	499.0	0	Phage capsid protein	N/A
eggNOG-mapper	UHGV-0057871_15	663278.Ethha_1589	374.0	0	N/A	N/A
structural_annotation	UHGV-0057871_15	PF19821,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0057871_16	phrog_2303	138.4	5.19994e-41	head scaffolding protein	head and packaging
eggNOG-mapper	UHGV-0057871_16	483218.BACPEC_01156	132.0	1.5e-35	N/A	N/A
PHROG	UHGV-0057871_18	phrog_373	183.8	0	anti-repressor	transcription regulation
UniRef90	UHGV-0057871_18	UniRef90_A0A3D5LSU5	462.0	0	Phage regulatory protein	N/A
eggNOG-mapper	UHGV-0057871_18	1499683.CCFF01000014_gene3944	202.0	0	ORF6C domain	N/A
Pfam	UHGV-0057871_18	PF09669	N/A	N/A	Phage regulatory protein Rha (Phage_pRha)	Phage_pRha
Pfam	UHGV-0057871_18	PF10552	N/A	N/A	ORF6C domain	ORF6C
NCBIFam	UHGV-0057871_18	TIGR02681.1	N/A	N/A	phage regulatory protein, Rha family	N/A
COG	UHGV-0057871_18	COG3646	N/A	N/A	Phage regulatory protein Rha	N/A
structural_annotation	UHGV-0057871_18	PF10552,PF09669,TIGR02681,COG3646	N/A	N/A	N/A	N/A
UniRef90	UHGV-0057871_19	UniRef90_A0A371IIX7	68.9	0.0000000000000336	CopG family transcriptional regulator	N/A
structural_annotation	UHGV-0057871_19	PF01402,NF041793,COG4710	N/A	N/A	N/A	N/A
UniRef90	UHGV-0057871_20	UniRef90_A0A3D5LR66	86.3	1.68e-21	Protein phosphatase	N/A
eggNOG-mapper	UHGV-0057871_20	411902.CLOBOL_03859	75.9	4.58e-18	N/A	N/A
AcrCatalog	UHGV-0057871_20	cluster_13845	76.6	6.86e-23	NA	N/A
PHROG	UHGV-0057871_22	phrog_355	62.0	1e-17	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0057871_22	UniRef90_A0A415G5B2	145.0	2.18603e-43	N/A	N/A
eggNOG-mapper	UHGV-0057871_22	1256908.HMPREF0373_00479	143.0	2.81661e-43	N/A	N/A
Pfam	UHGV-0057871_22	PF14359	N/A	N/A	N/A	DUF4406
structural_annotation	UHGV-0057871_22	PF14359,MF_03036,NF010074,COG3613	N/A	N/A	N/A	N/A
PHROG	UHGV-0057871_26	phrog_581	245.8	0	minor head protein	head and packaging
UniRef90	UHGV-0057871_26	UniRef90_A0A3D5LQU4	1025.0	0	Minor capsid protein	N/A
eggNOG-mapper	UHGV-0057871_26	33035.JPJF01000093_gene2255	451.0	0	N/A	N/A
Pfam	UHGV-0057871_26	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
Pfam	UHGV-0057871_26	PF03496	N/A	N/A	ADP-ribosyltransferase exoenzyme	ADPrib_exo_Tox
COG	UHGV-0057871_26	COG5585	N/A	N/A	Putative phage head morphogenesis protein, F of phage Mu or gp7 of SPP1	N/A
structural_annotation	UHGV-0057871_26	PF06152,PF01129,NF041404	N/A	N/A	N/A	N/A
PHROG	UHGV-0057871_27	phrog_533	292.9	0	portal protein	head and packaging
UniRef90	UHGV-0057871_27	UniRef90_A0A3D5LTG9	830.0	0	Capsid protein	N/A
eggNOG-mapper	UHGV-0057871_27	33035.JPJF01000093_gene2257	570.0	0	N/A	N/A
Pfam	UHGV-0057871_27	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0057871_27	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0057871_28	K06909	99.7	3.9e-29	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0057871_28	phrog_2	70.9	2.8e-20	terminase large subunit	head and packaging
UniRef90	UHGV-0057871_28	UniRef90_A0A413YU24	905.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0057871_28	1391647.AVSV01000003_gene1802	520.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-0057871_28	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-0057871_28	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0057871_28	PF03237,PF17289,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0057871_29	phrog_2538	90.4	1.7e-26	terminase small subunit	head and packaging
UniRef90	UHGV-0057871_29	UniRef90_A0A1C5UE81	144.0	4.13944e-42	HTH_Tnp_1_2 domain-containing protein	N/A
eggNOG-mapper	UHGV-0057871_29	1139219.I569_01387	59.7	0.00000000093	Helix-turn-helix of insertion element transposase	N/A
Pfam	UHGV-0057871_29	PF13022	N/A	N/A	Helix-turn-helix of insertion element transposase	HTH_Tnp_1_2
structural_annotation	UHGV-0057871_29	PF13022	N/A	N/A	N/A	N/A
PHROG	UHGV-0057871_30	phrog_36	46.6	0.00000000000054	transcriptional regulator	transcription regulation
eggNOG-mapper	UHGV-0057871_30	397290.C810_01391	137.0	1.4e-39	N/A	N/A
structural_annotation	UHGV-0057871_30	PF02996	N/A	N/A	N/A	N/A
PHROG	UHGV-0057871_31	phrog_355	73.9	2e-21	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0057871_31	UniRef90_UPI0002D32D58	58.5	0.0000000186	N/A	N/A
eggNOG-mapper	UHGV-0057871_31	1095772.CAHH01000052_gene252	58.5	0.00000000313	N/A	N/A
Pfam	UHGV-0057871_31	PF14359	N/A	N/A	N/A	DUF4406
structural_annotation	UHGV-0057871_31	PF14359,TIGR03646,COG3613	N/A	N/A	N/A	N/A
PHROG	UHGV-0057871_32	phrog_15077	105.3	1.1e-30	N/A	unknown function
UniRef90	UHGV-0057871_32	UniRef90_A0A3E3IZW1	204.0	0	N/A	N/A
eggNOG-mapper	UHGV-0057871_32	483218.BACPEC_01165	221.0	0	N/A	N/A
structural_annotation	UHGV-0057871_32	PF11300,NF038070	N/A	N/A	N/A	N/A
PHROG	UHGV-0057871_33	phrog_8470	299.0	0	N/A	unknown function
UniRef90	UHGV-0057871_33	UniRef90_UPI00164C094F	224.0	0	PcfJ domain-containing protein	N/A
eggNOG-mapper	UHGV-0057871_33	483218.BACPEC_01166	407.0	0	PcfJ-like protein	N/A
Pfam	UHGV-0057871_33	PF14284	N/A	N/A	PcfJ-like protein	PcfJ
structural_annotation	UHGV-0057871_33	PF14284	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0057871_34	483218.BACPEC_01167	194.0	0	N/A	N/A
KOfam	UHGV-0057871_35	K03469	79.9	4.6e-23	rnhA, RNASEH1; ribonuclease HI [EC:3.1.26.4]	N/A
PHROG	UHGV-0057871_35	phrog_531	73.0	4.4e-21	Rnase H	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0057871_35	UniRef90_A0A350VVB3	117.0	6.86e-31	RNase H type-1 domain-containing protein	N/A
eggNOG-mapper	UHGV-0057871_35	665950.HMPREF1025_02551	85.1	4.62e-19	RNase H	N/A
Pfam	UHGV-0057871_35	PF00075	N/A	N/A	RNase H	RNase_H
COG	UHGV-0057871_35	COG0328	N/A	N/A	Ribonuclease HI	N/A
structural_annotation	UHGV-0057871_35	PF00075,MF_00042,NF001236,COG0328	N/A	N/A	N/A	N/A
PHROG	UHGV-0057871_36	phrog_3584	155.1	0	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0057871_36	483218.BACPEC_01173	285.0	0	N/A	N/A
structural_annotation	UHGV-0057871_36	PF21578,NF041486	N/A	N/A	N/A	N/A
PHROG	UHGV-0057871_39	phrog_20040	46.6	0.00000000000043	N/A	unknown function
eggNOG-mapper	UHGV-0057871_39	1347393.HG726022_gene3609	88.6	3.53e-22	N/A	N/A
PHROG	UHGV-0057871_40	phrog_478	127.1	7.4e-38	site-specific recombination directionality factor RDF	integration and excision
UniRef90	UHGV-0057871_40	UniRef90_A0A373Q857	176.0	0	YopX domain-containing protein	N/A
eggNOG-mapper	UHGV-0057871_40	478749.BRYFOR_08526	102.0	4.29e-26	N/A	N/A
UniRef90	UHGV-0057871_45	UniRef90_A0A3D5L8I7	74.3	2.97e-16	DNA-binding protein	N/A
KOfam	UHGV-0057871_46	K07727	49.2	0.00000000000014	K07727; putative transcriptional regulator	N/A
PHROG	UHGV-0057871_46	phrog_8	52.6	0.00000000000001	transcriptional regulator	transcription regulation
UniRef90	UHGV-0057871_46	UniRef90_A0A174PA31	208.0	0	Predicted transcriptional regulator	N/A
eggNOG-mapper	UHGV-0057871_46	742735.HMPREF9467_01804	77.0	5.07e-17	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-0057871_46	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
structural_annotation	UHGV-0057871_46	PF12844,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0057871_47	phrog_87	86.6	2.3e-25	metallo-protease	other
UniRef90	UHGV-0057871_47	UniRef90_A0A3B9CDB4	199.0	0	Peptidase_M78 domain-containing protein	N/A
eggNOG-mapper	UHGV-0057871_47	1235792.C808_05259	172.0	0	Zn peptidase	N/A
Pfam	UHGV-0057871_47	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
COG	UHGV-0057871_47	COG2856	N/A	N/A	Zn-dependent peptidase ImmA, M78 family	N/A
structural_annotation	UHGV-0057871_47	PF06114,COG2856	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0057871_48	1504823.CCMM01000008_gene1082	135.0	5.4e-35	NAD+ binding	N/A
COG	UHGV-0057871_48	COG0846	N/A	N/A	NAD-dependent protein deacetylase, SIR2 family	N/A