UHGV-0060433 (vOTU-021192)

Viral Genome: UHGV-0060433

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0060433
vOTU ID	vOTU-021192
Representative Genome?	Yes
Source	GPD
Original genome ID	uvig_82859
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	85.31 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	34
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9769
Virus hallmark genes (geNomad)	7
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	15.82
Jumbo phage	No

Genome content
Genome length (bp)	54,063
GC content	45.09%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	85
CDS density	93%
Average CDS length (bps)	590.61
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 85.31)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0060433_1	phrog_2967	43.2	0.0000000000044	transcriptional regulator	transcription regulation
UniRef90	UHGV-0060433_1	UniRef90_A0A2V2CBZ6	240.0	0	HTH cro/C1-type domain-containing protein	N/A
Pfam	UHGV-0060433_1	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
Pfam	UHGV-0060433_1	PF20124	N/A	N/A	N/A	DUF6514
KOfam	UHGV-0060433_2	K14059	75.7	9.2e-22	int; integrase	N/A
PHROG	UHGV-0060433_2	phrog_1	120.1	2.5e-35	integrase	integration and excision
UniRef90	UHGV-0060433_2	UniRef90_A0A173RTF4	552.0	0	Site-specific recombinase XerD	N/A
eggNOG-mapper	UHGV-0060433_2	428125.CLOLEP_01345	513.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0060433_2	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0060433_2	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0060433_2	PF00589,MF_01808,NF007246,COG4974	N/A	N/A	N/A	N/A
PHROG	UHGV-0060433_3	phrog_6058	82.2	3.1e-24	N/A	unknown function
UniRef90	UHGV-0060433_3	UniRef90_A0A4Q7P3C7	142.0	7.69313e-43	Prolyl-tRNA synthetase	N/A
eggNOG-mapper	UHGV-0060433_3	665956.HMPREF1032_00623	147.0	2.8026e-45	N/A	N/A
PHROG	UHGV-0060433_4	phrog_11237	107.7	8.3e-32	N/A	unknown function
eggNOG-mapper	UHGV-0060433_4	478749.BRYFOR_08581	117.0	4.19e-32	N/A	N/A
structural_annotation	UHGV-0060433_5	PF19724,TIGR03090	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0060433_9	742740.HMPREF9474_02324	50.8	0.00000251	N/A	N/A
PHROG	UHGV-0060433_11	phrog_17256	174.3	0	N/A	unknown function
eggNOG-mapper	UHGV-0060433_11	665950.HMPREF1025_01937	152.0	0	N/A	N/A
eggNOG-mapper	UHGV-0060433_13	428125.CLOLEP_01355	49.3	0.000000182	N/A	N/A
PHROG	UHGV-0060433_15	phrog_2152	158.5	0	N/A	unknown function
UniRef90	UHGV-0060433_15	UniRef90_UPI00195869ED	154.0	3.52006e-42	N/A	N/A
eggNOG-mapper	UHGV-0060433_15	665956.HMPREF1032_00632	140.0	2.02e-37	N/A	N/A
Pfam	UHGV-0060433_15	PF19880	N/A	N/A	N/A	DUF6353
structural_annotation	UHGV-0060433_15	PF19880	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0060433_17	428125.CLOLEP_01360	56.2	0.00000000549	N/A	N/A
structural_annotation	UHGV-0060433_17	PF20930	N/A	N/A	N/A	N/A
PHROG	UHGV-0060433_18	phrog_2152	239.5	0	N/A	unknown function
UniRef90	UHGV-0060433_18	UniRef90_UPI0011CA98EE	241.0	0	N/A	N/A
eggNOG-mapper	UHGV-0060433_18	742740.HMPREF9474_02314	237.0	0	N/A	N/A
Pfam	UHGV-0060433_18	PF19880	N/A	N/A	N/A	DUF6353
structural_annotation	UHGV-0060433_18	PF19880	N/A	N/A	N/A	N/A
PHROG	UHGV-0060433_21	phrog_15567	98.4	3e-29	N/A	unknown function
eggNOG-mapper	UHGV-0060433_21	428125.CLOLEP_01364	74.7	3.32e-17	N/A	N/A
structural_annotation	UHGV-0060433_21	MF_00273,NF001981	N/A	N/A	N/A	N/A
PHROG	UHGV-0060433_22	phrog_4079	165.6	0	N/A	unknown function
eggNOG-mapper	UHGV-0060433_22	742733.HMPREF9469_05076	138.0	1.49e-38	N/A	N/A
PHROG	UHGV-0060433_23	phrog_2152	289.3	0	N/A	unknown function
UniRef90	UHGV-0060433_23	UniRef90_UPI00156DA7B3	249.0	0	N/A	N/A
eggNOG-mapper	UHGV-0060433_23	742740.HMPREF9474_02310	248.0	0	N/A	N/A
Pfam	UHGV-0060433_23	PF19880	N/A	N/A	N/A	DUF6353
structural_annotation	UHGV-0060433_23	PF19880	N/A	N/A	N/A	N/A
PHROG	UHGV-0060433_24	phrog_14968	74.5	8e-22	N/A	unknown function
UniRef90	UHGV-0060433_24	UniRef90_A0A3A9JBK4	64.7	0.000000000000882	Histidine kinase	N/A
eggNOG-mapper	UHGV-0060433_24	411460.RUMTOR_02031	61.6	0.00000000000246	N/A	N/A
PHROG	UHGV-0060433_25	phrog_4695	123.5	8.3e-37	N/A	unknown function
UniRef90	UHGV-0060433_25	UniRef90_UPI001D08D232	98.6	2.86e-22	YtxH domain-containing protein	N/A
eggNOG-mapper	UHGV-0060433_25	742740.HMPREF9474_02307	120.0	1.58e-31	N/A	N/A
PHROG	UHGV-0060433_26	phrog_4678	185.1	0	N/A	unknown function
eggNOG-mapper	UHGV-0060433_26	665956.HMPREF1032_00644	208.0	0	N/A	N/A
PHROG	UHGV-0060433_28	phrog_4210	373.6	0	DNA polymerase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0060433_28	UniRef90_A0A349YRF0	215.0	0	N/A	N/A
eggNOG-mapper	UHGV-0060433_28	665956.HMPREF1032_00647	389.0	0	DNA polymerase type-B family	N/A
structural_annotation	UHGV-0060433_28	PF19263,NF011296,COG3378	N/A	N/A	N/A	N/A
KOfam	UHGV-0060433_29	K02319	50.7	8.2e-16	pol; DNA polymerase, archaea type [EC:2.7.7.7]	N/A
PHROG	UHGV-0060433_29	phrog_4210	1534.8	0	DNA polymerase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0060433_29	UniRef90_G9RWJ6	1400.0	0	SF3 helicase domain-containing protein	N/A
eggNOG-mapper	UHGV-0060433_29	428125.CLOLEP_01375	1401.0	0	DNA polymerase type-B family	N/A
structural_annotation	UHGV-0060433_29	PF00136,PF09250,MF_04100,TIGR00592,COG0417	N/A	N/A	N/A	N/A
PHROG	UHGV-0060433_30	phrog_4787	153.3	1.4013e-45	single strand annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0060433_30	UniRef90_D4P7I8	129.0	7.51e-35	Gp077	N/A
eggNOG-mapper	UHGV-0060433_30	411460.RUMTOR_01384	147.0	2.21405e-43	N/A	N/A
structural_annotation	UHGV-0060433_30	PF21265,MF_04153	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0060433_32	PF19880	N/A	N/A	N/A	N/A
PHROG	UHGV-0060433_33	phrog_19852	53.1	0.000000000000004	N/A	unknown function
eggNOG-mapper	UHGV-0060433_33	742740.HMPREF9474_02297	45.4	0.00000624	N/A	N/A
PHROG	UHGV-0060433_34	phrog_62	148.0	6.16571e-44	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0060433_34	UniRef90_UPI001D08DE3D	588.0	0	DEAD/DEAH box helicase family protein	N/A
eggNOG-mapper	UHGV-0060433_34	742740.HMPREF9474_02299	548.0	0	Helicase conserved C-terminal domain	N/A
COG	UHGV-0060433_34	COG0553	N/A	N/A	Superfamily II DNA or RNA helicase, SNF2 family	N/A
structural_annotation	UHGV-0060433_34	PF02399,MF_01821,NF038318,COG0553	N/A	N/A	N/A	N/A
PHROG	UHGV-0060433_35	phrog_38339	149.3	8.40779e-45	N/A	unknown function
UniRef90	UHGV-0060433_35	UniRef90_U2QNH6	150.0	8.36996e-42	Hydrolase_2 domain-containing protein	N/A
structural_annotation	UHGV-0060433_35	PF07486,TIGR02869,COG3773	N/A	N/A	N/A	N/A
PHROG	UHGV-0060433_37	phrog_6466	92.4	3.2e-27	DNA ligase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0060433_37	UniRef90_H1CCJ0	115.0	1.15e-31	DNA_ligase_aden domain-containing protein	N/A
eggNOG-mapper	UHGV-0060433_37	871584.D9ZNI4_9CAUD	78.6	9.51e-18	DNA ligase (NAD+) activity	N/A
KOfam	UHGV-0060433_40	K00942	80.8	2.1e-23	gmk, GUK1; guanylate kinase [EC:2.7.4.8]	N/A
PHROG	UHGV-0060433_40	phrog_1815	139.5	2.59997e-41	guanylate kinase	other
UniRef90	UHGV-0060433_40	UniRef90_A0A350TI94	143.0	2.26e-40	GuKc domain-containing protein	N/A
eggNOG-mapper	UHGV-0060433_40	641107.CDLVIII_3066	97.4	4.61e-23	Guanylate kinase	N/A
Pfam	UHGV-0060433_40	PF00625	N/A	N/A	Guanylate kinase	Guanylate_kin
COG	UHGV-0060433_40	COG0194	N/A	N/A	Guanylate kinase	N/A
structural_annotation	UHGV-0060433_40	PF00625,MF_00328,TIGR03263,COG0194	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0060433_41	334413.FMG_P0013	95.9	1.51e-23	N/A	N/A
structural_annotation	UHGV-0060433_46	PF09947,NF006816,COG4830	N/A	N/A	N/A	N/A
KOfam	UHGV-0060433_47	K07097	104.8	1e-30	N/A	N/A
PHROG	UHGV-0060433_47	phrog_4771	111.0	1e-32	DHH phosphoesterase	other
UniRef90	UHGV-0060433_47	UniRef90_A0A267MPB5	388.0	0	Phosphohydrolase	N/A
eggNOG-mapper	UHGV-0060433_47	1196322.A370_01578	381.0	0	hydrolase activity, acting on ester bonds	N/A
COG	UHGV-0060433_47	COG2404	N/A	N/A	Oligoribonuclease NrnA/c-di-AMP phosphodiesterase DhhP, DHH superfamily	N/A
structural_annotation	UHGV-0060433_47	PF02272,MF_00207,NF040701,COG2404	N/A	N/A	N/A	N/A
PHROG	UHGV-0060433_53	phrog_18984	91.7	3.7e-27	N/A	unknown function
eggNOG-mapper	UHGV-0060433_53	742740.HMPREF9474_02296	64.7	0.000000000000245	N/A	N/A
eggNOG-mapper	UHGV-0060433_54	428125.CLOLEP_01384	85.5	1.89e-20	N/A	N/A
PHROG	UHGV-0060433_55	phrog_6721	289.6	0	N/A	unknown function
eggNOG-mapper	UHGV-0060433_55	665956.HMPREF1032_00655	310.0	0	N/A	N/A
PHROG	UHGV-0060433_57	phrog_3392	133.2	2.2e-39	N/A	unknown function
UniRef90	UHGV-0060433_57	UniRef90_A0A1K1KSW2	114.0	1.6e-29	N/A	N/A
eggNOG-mapper	UHGV-0060433_57	1308863.U5J9Q1_9CAUD	115.0	3.66e-30	N/A	N/A
PHROG	UHGV-0060433_60	phrog_229	109.4	8.9e-33	MazG-like pyrophosphatase	other
eggNOG-mapper	UHGV-0060433_60	665956.HMPREF1032_00660	99.8	3.55e-23	MazG nucleotide pyrophosphohydrolase domain	N/A
Pfam	UHGV-0060433_60	PF03819	N/A	N/A	MazG nucleotide pyrophosphohydrolase domain	MazG
COG	UHGV-0060433_60	COG1694	N/A	N/A	NTP pyrophosphatase, house-cleaning of non-canonical NTPs	N/A
structural_annotation	UHGV-0060433_60	PF12643,MF_01019,NF002747,COG1694	N/A	N/A	N/A	N/A
UniRef90	UHGV-0060433_62	UniRef90_A0A6G3M1K4	261.0	0	Catabolite control protein A	N/A
eggNOG-mapper	UHGV-0060433_62	411467.BACCAP_04531	265.0	0	N/A	N/A
eggNOG-mapper	UHGV-0060433_63	742740.HMPREF9474_02280	112.0	4.81e-31	N/A	N/A
structural_annotation	UHGV-0060433_63	PF01870,COG1591	N/A	N/A	N/A	N/A
PHROG	UHGV-0060433_64	phrog_3953	184.5	0	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0060433_64	UniRef90_UPI001D06A0CE	238.0	0	N/A	N/A
eggNOG-mapper	UHGV-0060433_64	742740.HMPREF9474_02279	240.0	0	N/A	N/A
Pfam	UHGV-0060433_64	PF10926	N/A	N/A	N/A	DUF2800
structural_annotation	UHGV-0060433_64	PF10926,MF_03030,TIGR00372,COG2887	N/A	N/A	N/A	N/A
PHROG	UHGV-0060433_65	phrog_4291	1291.3	0	RNA-dependent RNA polymerase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0060433_65	UniRef90_G9RWL4	1238.0	0	HTH luxR-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0060433_65	665956.HMPREF1032_00665	1238.0	0	Bacterial regulatory proteins, luxR family	N/A
Pfam	UHGV-0060433_65	PF13384	N/A	N/A	Homeodomain-like domain	HTH_23
dbAPIS	UHGV-0060433_65	APIS006	N/A	N/A	Trigger programmed cell death (PCD) by P4 prophage.	N/A
structural_annotation	UHGV-0060433_65	PF05183	N/A	N/A	N/A	N/A
PHROG	UHGV-0060433_66	phrog_4303	120.4	5.6e-36	N/A	unknown function
eggNOG-mapper	UHGV-0060433_66	665956.HMPREF1032_00666	114.0	2.41e-32	N/A	N/A
structural_annotation	UHGV-0060433_67	PF00386,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-0060433_68	phrog_4259	131.1	3.2e-39	N/A	unknown function
eggNOG-mapper	UHGV-0060433_68	742740.HMPREF9474_02276	103.0	2.24e-27	N/A	N/A
PHROG	UHGV-0060433_69	phrog_4321	188.1	0	HNH endonuclease	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0060433_69	428125.CLOLEP_01405	183.0	0	N/A	N/A
PHROG	UHGV-0060433_70	phrog_4247	149.0	8.40779e-45	virion structural protein	head and packaging
UniRef90	UHGV-0060433_70	UniRef90_A0A373C8E1	124.0	1.68e-33	Structural protein	N/A
eggNOG-mapper	UHGV-0060433_70	428125.CLOLEP_01407	129.0	5.83e-37	N/A	N/A
PHROG	UHGV-0060433_71	phrog_7021	74.7	1.3e-21	N/A	unknown function
eggNOG-mapper	UHGV-0060433_71	428125.CLOLEP_01408	81.6	1.82e-17	N/A	N/A
PHROG	UHGV-0060433_72	phrog_9	226.7	0	terminase large subunit	head and packaging
UniRef90	UHGV-0060433_72	UniRef90_UPI001D05F004	1026.0	0	terminase large subunit	N/A
eggNOG-mapper	UHGV-0060433_72	665956.HMPREF1032_00672	998.0	0	Phage Terminase	N/A
Pfam	UHGV-0060433_72	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0060433_72	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0060433_72	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0060433_73	phrog_32444	47.3	0.00000000000032	N/A	unknown function
eggNOG-mapper	UHGV-0060433_73	665956.HMPREF1032_00673	226.0	0	N/A	N/A
PHROG	UHGV-0060433_74	phrog_12	129.1	2.7e-38	portal protein	head and packaging
UniRef90	UHGV-0060433_74	UniRef90_A0A1Y4MMD6	554.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0060433_74	411460.RUMTOR_01348	563.0	0	Phage portal protein	N/A
Pfam	UHGV-0060433_74	PF04860	N/A	N/A	Phage portal protein	Phage_portal
structural_annotation	UHGV-0060433_74	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-0060433_75	phrog_11413	88.3	4e-31	N/A	unknown function
eggNOG-mapper	UHGV-0060433_75	742733.HMPREF9469_05031	84.0	1.04e-16	N/A	N/A
structural_annotation	UHGV-0060433_75	PF16535	N/A	N/A	N/A	N/A
KOfam	UHGV-0060433_76	K06904	61.9	9e-18	N/A	N/A
PHROG	UHGV-0060433_76	phrog_3270	716.6	0	head maturation protease	head and packaging
UniRef90	UHGV-0060433_76	UniRef90_A7VS74	852.0	0	Caudovirus prohead protease	N/A
eggNOG-mapper	UHGV-0060433_76	428125.CLOLEP_01412	852.0	0	Caudovirus prohead serine protease	N/A
structural_annotation	UHGV-0060433_76	PF04586,PF06673,TIGR01543,TIGR01554,COG3740,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0060433_77	phrog_4270	152.8	0	N/A	unknown function
eggNOG-mapper	UHGV-0060433_77	665956.HMPREF1032_00677	164.0	0	N/A	N/A
structural_annotation	UHGV-0060433_77	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0060433_78	428125.CLOLEP_01414	107.0	6.69e-29	N/A	N/A
structural_annotation	UHGV-0060433_78	PF20765	N/A	N/A	N/A	N/A
PHROG	UHGV-0060433_79	phrog_2645	328.1	0	major tail protein	tail
UniRef90	UHGV-0060433_79	UniRef90_A0A2U8UI58	276.0	0	Major tail protein	N/A
eggNOG-mapper	UHGV-0060433_79	742733.HMPREF9469_05026	285.0	0	N/A	N/A
structural_annotation	UHGV-0060433_79	PF06488,TIGR01603,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0060433_80	phrog_4282	143.3	1.10002e-42	N/A	unknown function
eggNOG-mapper	UHGV-0060433_80	478749.BRYFOR_08517	125.0	8.52e-35	N/A	N/A
PHROG	UHGV-0060433_81	phrog_4338	257.9	0	N/A	unknown function
eggNOG-mapper	UHGV-0060433_81	411460.RUMTOR_01339	218.0	0	N/A	N/A
UniRef90	UHGV-0060433_82	UniRef90_A0A3A9JBQ1	204.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0060433_82	665956.HMPREF1032_00685	204.0	0	N/A	N/A
Pfam	UHGV-0060433_82	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-0060433_82	TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-0060433_83	phrog_4372	561.8	0	tail length tape measure protein	tail
UniRef90	UHGV-0060433_83	UniRef90_UPI0018AC889D	635.0	0	tape measure protein	N/A
eggNOG-mapper	UHGV-0060433_83	742733.HMPREF9469_05020	601.0	0	phage tail tape measure protein	N/A
Pfam	UHGV-0060433_83	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-0060433_83	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-0060433_83	COG5412	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0060433_83	PF20155,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0060433_84	phrog_4372	241.6	0	tail length tape measure protein	tail
eggNOG-mapper	UHGV-0060433_84	742740.HMPREF9474_02262	228.0	0	phage tail tape measure protein	N/A
COG	UHGV-0060433_84	COG5412	N/A	N/A	Phage-related protein	N/A
PHROG	UHGV-0060433_85	phrog_33	54.6	0.0000000000000031	distal tail protein Dit	tail
UniRef90	UHGV-0060433_85	UniRef90_A0A173Z1X4	243.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0060433_85	1160721.RBI_I01575	130.0	1.72e-34	Phage tail protein	N/A
COG	UHGV-0060433_85	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0060433_85	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A