UHGV-0063755 (vOTU-133245)

Viral Genome: UHGV-0063755

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0063755
vOTU ID	vOTU-133245
Representative Genome?	Yes
Source	GPD
Original genome ID	uvig_93304
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	89.55 (Medium-quality)
Trimmed provirus	Yes
CheckV viral markers	15
CheckV host markers	3
Recoded stop codon	No

Viral Content
geNomad score	0.9687
Virus hallmark genes (geNomad)	9
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	33.15
Jumbo phage	No

Genome content
Genome length (bp)	31,275
GC content	52.44%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	46
CDS density	92%
Average CDS length (bps)	626.67
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 89.55)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-0063755_1	UniRef90_A0A1Y4NG17	242.0	0	Catalase	N/A
eggNOG-mapper	UHGV-0063755_1	411473.RUMCAL_00093	343.0	0	N/A	N/A
Pfam	UHGV-0063755_1	PF18907	N/A	N/A	N/A	DUF5662
Pfam	UHGV-0063755_1	PF13240	N/A	N/A	zinc-ribbon domain	zinc_ribbon_2
KOfam	UHGV-0063755_2	K22300	50.6	0.000000000000043	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0063755_2	phrog_8	50.1	0.000000000000062	transcriptional regulator	transcription regulation
UniRef90	UHGV-0063755_2	UniRef90_U2K899	239.0	0	Bacteriophage CI repressor protein	N/A
eggNOG-mapper	UHGV-0063755_2	411473.RUMCAL_01900	239.0	0	Bacteriophage CI repressor helix-turn-helix domain	N/A
Pfam	UHGV-0063755_2	PF07022	N/A	N/A	Bacteriophage CI repressor helix-turn-helix domain	Phage_CI_repr
COG	UHGV-0063755_2	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0063755_2	PF12844,MF_00535,NF007257,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0063755_7	K23779	57.3	4.2e-16	sutR; XRE family transcriptional regulator, regulator of sulfur utilization	N/A
PHROG	UHGV-0063755_7	phrog_5823	46.5	0.00000000000053	transcriptional regulator	transcription regulation
UniRef90	UHGV-0063755_7	UniRef90_U2K8A4	149.0	1.4013e-45	DNA-binding helix-turn-helix protein	N/A
eggNOG-mapper	UHGV-0063755_7	596154.Alide2_1081	47.8	0.00000356	Helix-turn-helix domain	N/A
PADLOC	UHGV-0063755_7	retron_type_VI_hth_cluster2_1	51.6	0.000000000000029	N/A	Retron
Pfam	UHGV-0063755_7	PF13560	N/A	N/A	Helix-turn-helix domain	HTH_31
COG	UHGV-0063755_7	COG3620	N/A	N/A	Predicted transcriptional regulator, contains an XRE-type HTH domain (archaeal members contain CBS pair)	N/A
PHROG	UHGV-0063755_10	phrog_310	365.0	0	transposase	integration and excision
UniRef90	UHGV-0063755_10	UniRef90_U2LZ18	1322.0	0	Integrase catalytic domain-containing protein	N/A
eggNOG-mapper	UHGV-0063755_10	411473.RUMCAL_01908	1322.0	0	Mu transposase, C-terminal	N/A
PADLOC	UHGV-0063755_10	TnsB_0_V-K	62.0	8.1e-18	TnsB_0_V-K	CRISPR-CAS
Pfam	UHGV-0063755_10	PF09039	N/A	N/A	Mu DNA binding, I gamma subdomain	HTH_Tnp_Mu_2
Pfam	UHGV-0063755_10	PF02914	N/A	N/A	Bacteriophage Mu transposase	DDE_2
Pfam	UHGV-0063755_10	PF09299	N/A	N/A	Mu transposase, C-terminal	Mu-transpos_C
COG	UHGV-0063755_10	COG2801	N/A	N/A	Transposase InsO and inactivated derivatives	N/A
structural_annotation	UHGV-0063755_10	PF02914,PF09039,PF09299,PF21531,NF033594,TIGR01764,COG3316,COG3311	N/A	N/A	N/A	N/A
KOfam	UHGV-0063755_11	K07132	59.0	8e-17	MuB; ATP-dependent target DNA activator	N/A
PHROG	UHGV-0063755_11	phrog_296	140.1	2.09999e-41	DNA transposition protein	integration and excision
UniRef90	UHGV-0063755_11	UniRef90_R7FFF2	589.0	0	AAA domain protein	N/A
eggNOG-mapper	UHGV-0063755_11	411473.RUMCAL_01909	589.0	0	AAA domain	N/A
Pfam	UHGV-0063755_11	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
Pfam	UHGV-0063755_11	PF13401	N/A	N/A	AAA domain	AAA_22
COG	UHGV-0063755_11	COG2842	N/A	N/A	Bacteriophage DNA transposition protein, AAA+ family ATPase	N/A
structural_annotation	UHGV-0063755_11	PF13401,MF_01407,TIGR03015,COG2842	N/A	N/A	N/A	N/A
PHROG	UHGV-0063755_12	phrog_4292	90.1	1.2e-26	N/A	unknown function
UniRef90	UHGV-0063755_12	UniRef90_A0A7G3VS96	52.8	0.0000000565	Putative NHN endonuclease	N/A
eggNOG-mapper	UHGV-0063755_12	411473.RUMCAL_01910	119.0	4.31e-35	N/A	N/A
PHROG	UHGV-0063755_13	phrog_6244	86.6	3.6e-25	N/A	unknown function
eggNOG-mapper	UHGV-0063755_13	1232453.BAIF02000002_gene1275	81.3	7.11e-19	YqaJ viral recombinase family	N/A
COG	UHGV-0063755_13	COG5377	N/A	N/A	Phage-related protein, predicted endonuclease	N/A
PHROG	UHGV-0063755_14	phrog_270	78.6	1.3e-22	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0063755_14	411473.RUMCAL_01913	209.0	0	HNH endonuclease	N/A
COG	UHGV-0063755_14	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
KOfam	UHGV-0063755_15	K02315	117.9	1.1e-34	dnaC; DNA replication protein DnaC	N/A
PHROG	UHGV-0063755_15	phrog_50	136.5	2.2e-40	DnaC-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0063755_15	UniRef90_U2KRN6	484.0	0	IstB_IS21 domain-containing protein	N/A
eggNOG-mapper	UHGV-0063755_15	411473.RUMCAL_01914	484.0	0	N/A	N/A
Pfam	UHGV-0063755_15	PF01695	N/A	N/A	IstB-like ATP binding protein	IstB_IS21
COG	UHGV-0063755_15	COG1484	N/A	N/A	DNA replication protein DnaC	N/A
structural_annotation	UHGV-0063755_15	PF01695,MF_01158,NF005378,COG1484	N/A	N/A	N/A	N/A
PHROG	UHGV-0063755_16	phrog_286	76.5	4.8e-22	N/A	unknown function
UniRef90	UHGV-0063755_16	UniRef90_A0A373KYV3	109.0	2.49e-27	N/A	N/A
eggNOG-mapper	UHGV-0063755_16	411473.RUMCAL_01915	296.0	0	N/A	N/A
Pfam	UHGV-0063755_16	PF06252	N/A	N/A	Bacteriophage Mu, GemA protein	GemA
structural_annotation	UHGV-0063755_16	PF06252	N/A	N/A	N/A	N/A
PHROG	UHGV-0063755_17	phrog_532	66.6	4.2e-19	late transcriptional activator	transcription regulation
UniRef90	UHGV-0063755_17	UniRef90_U2KR36	193.0	0	Mor transcription activator family protein	N/A
eggNOG-mapper	UHGV-0063755_17	411473.RUMCAL_01916	193.0	0	Mor transcription activator	N/A
Pfam	UHGV-0063755_17	PF08765	N/A	N/A	Mor transcription activator family	Mor
COG	UHGV-0063755_17	COG5566	N/A	N/A	Transcriptional regulator, middle operon regulator (Mor) family	N/A
structural_annotation	UHGV-0063755_17	PF08765,NF040785,COG5566	N/A	N/A	N/A	N/A
PHROG	UHGV-0063755_18	phrog_462	63.2	2.5e-18	lipoprotein	other
eggNOG-mapper	UHGV-0063755_18	411473.RUMCAL_01917	193.0	0	N/A	N/A
PHROG	UHGV-0063755_19	phrog_25462	185.7	0	N/A	unknown function
UniRef90	UHGV-0063755_19	UniRef90_A0A3C0QMV8	139.0	7.99006e-41	Type VI secretion protein	N/A
eggNOG-mapper	UHGV-0063755_19	411473.RUMCAL_01918	205.0	0	N/A	N/A
structural_annotation	UHGV-0063755_19	PF01638,MF_01819,NF002926,COG1733	N/A	N/A	N/A	N/A
PHROG	UHGV-0063755_20	phrog_426	105.0	9.7e-31	terminase small subunit	head and packaging
UniRef90	UHGV-0063755_20	UniRef90_UPI001D05DC57	176.0	0	N/A	N/A
eggNOG-mapper	UHGV-0063755_20	411473.RUMCAL_01919	350.0	0	N/A	N/A
Pfam	UHGV-0063755_20	PF11985	N/A	N/A	Bacteriophage Mu, Gp27	Phage_Mu_Gp27
structural_annotation	UHGV-0063755_20	PF11985	N/A	N/A	N/A	N/A
KOfam	UHGV-0063755_21	K02601	54.6	0.0000000000000018	nusG; transcription termination/antitermination protein NusG	N/A
PHROG	UHGV-0063755_21	phrog_6386	128.9	3.1e-38	transcription antiterminator	transcription regulation
UniRef90	UHGV-0063755_21	UniRef90_U2K8B7	336.0	0	Transcription termination/antitermination factor NusG	N/A
eggNOG-mapper	UHGV-0063755_21	411473.RUMCAL_01920	336.0	0	Transcription termination factor nusG	N/A
Pfam	UHGV-0063755_21	PF02357	N/A	N/A	Transcription termination factor nusG	NusG
COG	UHGV-0063755_21	COG0250	N/A	N/A	Transcription termination/antitermination protein NusG	N/A
structural_annotation	UHGV-0063755_21	PF02357,MF_00951,NF033641,COG0250	N/A	N/A	N/A	N/A
UniRef90	UHGV-0063755_22	UniRef90_W0U9H3	56.2	0.000000167	Phage terminase, small subunit	N/A
eggNOG-mapper	UHGV-0063755_22	411473.RUMCAL_01921	215.0	0	N/A	N/A
KOfam	UHGV-0063755_23	K06909	142.7	3.30006e-42	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0063755_23	phrog_2	164.2	0	terminase large subunit	head and packaging
UniRef90	UHGV-0063755_23	UniRef90_U2LZ34	901.0	0	Phage terminase, large subunit, PBSX family	N/A
eggNOG-mapper	UHGV-0063755_23	411473.RUMCAL_01923	901.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-0063755_23	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
NCBIFam	UHGV-0063755_23	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0063755_23	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0063755_23	PF03237,PF17289,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0063755_24	phrog_533	328.3	0	portal protein	head and packaging
UniRef90	UHGV-0063755_24	UniRef90_U2KRP5	890.0	0	Putative phage minor capsid protein	N/A
eggNOG-mapper	UHGV-0063755_24	411473.RUMCAL_01924	890.0	0	N/A	N/A
structural_annotation	UHGV-0063755_24	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0063755_25	phrog_581	320.9	0	minor head protein	head and packaging
UniRef90	UHGV-0063755_25	UniRef90_U2K8C2	761.0	0	Phage minor capsid protein 2	N/A
eggNOG-mapper	UHGV-0063755_25	411473.RUMCAL_01925	761.0	0	N/A	N/A
Pfam	UHGV-0063755_25	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0063755_25	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0063755_25	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-0063755_28	phrog_194	57.9	2.4e-16	head scaffolding protein	head and packaging
UniRef90	UHGV-0063755_28	UniRef90_R7FEY9	323.0	0	Phage minor structural protein GP20	N/A
eggNOG-mapper	UHGV-0063755_28	411473.RUMCAL_01929	323.0	0	Phage minor structural protein GP20	N/A
Pfam	UHGV-0063755_28	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-0063755_28	PF06810,MF_02110	N/A	N/A	N/A	N/A
PHROG	UHGV-0063755_29	phrog_267	96.3	3.4e-28	major head protein	head and packaging
UniRef90	UHGV-0063755_29	UniRef90_A0A4P8IA69	361.0	0	Phage capsid and scaffold	N/A
eggNOG-mapper	UHGV-0063755_29	411473.RUMCAL_01930	549.0	0	N/A	N/A
structural_annotation	UHGV-0063755_29	PF11651,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0063755_30	phrog_541	101.0	8.5e-30	head-tail adaptor	connector
eggNOG-mapper	UHGV-0063755_30	641112.ACOK01000073_gene2896	105.0	2.89e-27	N/A	N/A
PHROG	UHGV-0063755_31	phrog_3366	61.2	1.7e-18	N/A	unknown function
eggNOG-mapper	UHGV-0063755_31	411473.RUMCAL_01932	225.0	0	N/A	N/A
structural_annotation	UHGV-0063755_31	PF20536,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0063755_32	phrog_556	92.8	2.8e-27	minor head protein	head and packaging
UniRef90	UHGV-0063755_32	UniRef90_T3DSR7	79.0	1.2e-16	Minor capsid family protein	N/A
eggNOG-mapper	UHGV-0063755_32	1151292.QEW_4532	79.0	2.01e-17	Minor capsid protein	N/A
Pfam	UHGV-0063755_32	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0063755_32	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0063755_33	phrog_3266	169.0	0	tail completion	connector
UniRef90	UHGV-0063755_33	UniRef90_A0A355UZ60	169.0	0	Chloramphenicol resistance protein	N/A
eggNOG-mapper	UHGV-0063755_33	411473.RUMCAL_01934	301.0	0	N/A	N/A
structural_annotation	UHGV-0063755_33	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0063755_34	phrog_3099	188.7	0	N/A	unknown function
eggNOG-mapper	UHGV-0063755_34	411473.RUMCAL_01935	494.0	0	N/A	N/A
structural_annotation	UHGV-0063755_34	PF08813,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0063755_35	phrog_4450	107.4	1.1e-31	N/A	unknown function
UniRef90	UHGV-0063755_35	UniRef90_A0A355D9Y6	53.9	0.000000748	AP endonuclease	N/A
eggNOG-mapper	UHGV-0063755_35	641112.ACOK01000073_gene2902	90.9	8.06e-22	N/A	N/A
Pfam	UHGV-0063755_35	PF20378	N/A	N/A	N/A	DUF6673
structural_annotation	UHGV-0063755_35	PF20378	N/A	N/A	N/A	N/A
PHROG	UHGV-0063755_36	phrog_706	165.3	0	N/A	unknown function
UniRef90	UHGV-0063755_36	UniRef90_B0NG03	144.0	3.45e-40	Bacteriophage Gp15 protein	N/A
eggNOG-mapper	UHGV-0063755_36	411473.RUMCAL_01937	386.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0063755_36	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0063755_36	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0063755_37	phrog_1272	255.1	0	tail length tape measure protein	tail
UniRef90	UHGV-0063755_37	UniRef90_R7FII5	805.0	0	PhageMin_Tail domain-containing protein	N/A
eggNOG-mapper	UHGV-0063755_37	411473.RUMCAL_01938	806.0	0	tail tape measure protein, TP901	N/A
Pfam	UHGV-0063755_37	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
COG	UHGV-0063755_37	COG5280	N/A	N/A	Phage-related minor tail protein	N/A
structural_annotation	UHGV-0063755_37	PF10145,TIGR01760,COG5280	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0063755_39	PF14594,TIGR03361,COG3500	N/A	N/A	N/A	N/A
KOfam	UHGV-0063755_40	K16628	81.3	3.6e-24	COL7A; collagen type VII alpha	N/A
PHROG	UHGV-0063755_40	phrog_25888	494.5	0	N/A	unknown function
UniRef90	UHGV-0063755_40	UniRef90_U2KR58	591.0	0	Collagen triple helix repeat protein	N/A
eggNOG-mapper	UHGV-0063755_40	411473.RUMCAL_01941	591.0	0	cell adhesion	N/A
Pfam	UHGV-0063755_40	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
COG	UHGV-0063755_40	COG3468	N/A	N/A	Autotransporter adhesin AidA	N/A
structural_annotation	UHGV-0063755_40	PF10651	N/A	N/A	N/A	N/A
PHROG	UHGV-0063755_41	phrog_35590	360.9	0	N/A	unknown function
eggNOG-mapper	UHGV-0063755_41	411473.RUMCAL_00613	107.0	2.14e-24	Collagen triple helix repeat (20 copies)	N/A
COG	UHGV-0063755_41	COG2931	N/A	N/A	Ca2+-binding protein, RTX toxin-related	N/A
structural_annotation	UHGV-0063755_41	PF07675,NF038128	N/A	N/A	N/A	N/A
PHROG	UHGV-0063755_43	phrog_1129	66.4	3.4e-19	holin	lysis
UniRef90	UHGV-0063755_43	UniRef90_A0A1C7FPV3	117.0	1.71e-32	Enolase	N/A
eggNOG-mapper	UHGV-0063755_43	411473.RUMCAL_01944	160.0	0	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-0063755_43	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0063755_43	PF06946	N/A	N/A	N/A	N/A
KOfam	UHGV-0063755_44	K07273	183.4	0	acm; lysozyme	N/A
PHROG	UHGV-0063755_44	phrog_291	135.6	3.5e-40	endolysin	lysis
UniRef90	UHGV-0063755_44	UniRef90_U2K8D9	709.0	0	Glycosyl hydrolase family 25	N/A
eggNOG-mapper	UHGV-0063755_44	411473.RUMCAL_01945	709.0	0	hydrolase, family 25	N/A
Pfam	UHGV-0063755_44	PF08291	N/A	N/A	Peptidase M15	Peptidase_M15_3
Pfam	UHGV-0063755_44	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-0063755_44	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-0063755_44	PF01183,PF08291,NF007557,COG3757,COG3108	N/A	N/A	N/A	N/A
UniRef90	UHGV-0063755_45	UniRef90_U2KG59	219.0	0	zinc_ribbon_2 domain-containing protein	N/A
KOfam	UHGV-0063755_46	K03790	115.4	6.9e-34	rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267]	N/A
UniRef90	UHGV-0063755_46	UniRef90_U2KZJ4	329.0	0	Acetyltransferase, GNAT family	N/A
eggNOG-mapper	UHGV-0063755_46	411473.RUMCAL_00091	329.0	0	Acetyltransferase (GNAT) domain	N/A
Pfam	UHGV-0063755_46	PF13302	N/A	N/A	Acetyltransferase (GNAT) domain	Acetyltransf_3
COG	UHGV-0063755_46	COG1670	N/A	N/A	Protein N-acetyltransferase, RimJ/RimL family	N/A
structural_annotation	UHGV-0063755_46	PF13302,MF_02210,NF000485,COG1670	N/A	N/A	N/A	N/A