Overview | |
---|---|
UHGV ID | UHGV-0064169 |
vOTU ID | vOTU-000195 |
Representative Genome? | No |
Source | GPD |
Original genome ID | uvig_79642 |
Associated BioSample | SAMEA2338656 |
Viral genome confidence | Confident |
Quality assessment | |
---|---|
CheckV method | AAI-based |
CheckV completeness | 35.39 (Low-quality) |
Trimmed provirus | Yes |
CheckV viral markers | 17 |
CheckV host markers | 3 |
Recoded stop codon | Yes |
Viral Content | |
---|---|
geNomad score | 0.9802 |
Virus hallmark genes (geNomad) | 2 |
Plasmid hallmark genes (geNomad) | 0 |
viralVerify prediction | Uncertain - plasmid or chromosomal |
viralVerify score | 2.13 |
Jumbo phage | No |
Genome content | |
---|---|
Genome length (bp) | 52,003 |
GC content | 38.84% |
Genetic code | Blepharisma Nuclear Code (15) |
CDS genes | 55 |
CDS density | 92% |
Average CDS length (bps) | 866.13 |
Total tRNA genes | 0 |
Suppressor tRNA genes | 0 |