UHGV-0065776 (vOTU-137531)

Viral Genome: UHGV-0065776

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0065776
vOTU ID	vOTU-137531
Representative Genome?	Yes
Source	GPD
Original genome ID	uvig_67796
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	59.32 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	10
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9715
Virus hallmark genes (geNomad)	4
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	20.99
Jumbo phage	No

Genome content
Genome length (bp)	30,491
GC content	47.93%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	48
CDS density	89%
Average CDS length (bps)	562.44
Total tRNA genes	1
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 59.32)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0065776_1	K06400	309.6	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-0065776_1	phrog_95	323.2	0	integrase	integration and excision
UniRef90	UHGV-0065776_1	UniRef90_A0A3D4L1F3	1001.0	0	Recombinase family protein	N/A
eggNOG-mapper	UHGV-0065776_1	1449050.JNLE01000005_gene3962	461.0	0	Recombinase	N/A
Pfam	UHGV-0065776_1	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-0065776_1	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-0065776_1	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-0065776_1	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0065776_1	PF07508,PF00239,NF041201,COG1961	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0065776_4	445972.ANACOL_03321	53.5	0.00000471	Swim zinc finger domain protein	N/A
Pfam	UHGV-0065776_4	PF04434	N/A	N/A	SWIM zinc finger	SWIM
Pfam	UHGV-0065776_4	PF00533	N/A	N/A	BRCA1 C Terminus (BRCT) domain	BRCT
PHROG	UHGV-0065776_6	phrog_8	55.1	0.0000000000000018	transcriptional regulator	transcription regulation
UniRef90	UHGV-0065776_6	UniRef90_A0A355JCJ7	90.5	6.95e-21	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0065776_6	1226325.HMPREF1548_03112	77.4	7.37e-16	Helix-turn-helix domain	N/A
Pfam	UHGV-0065776_6	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
structural_annotation	UHGV-0065776_6	PF12844,MF_00535,NF007257,COG3655	N/A	N/A	N/A	N/A
KOfam	UHGV-0065776_7	K22300	49.1	0.00000000000012	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0065776_7	phrog_8	41.7	0.000000000022	transcriptional regulator	transcription regulation
UniRef90	UHGV-0065776_7	UniRef90_A0A3D4L2B2	177.0	0	HTH cro/C1-type domain-containing protein	N/A
Pfam	UHGV-0065776_7	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0065776_7	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
UniRef90	UHGV-0065776_8	UniRef90_A0A3D4L0W1	143.0	3.08286e-43	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0065776_8	1410626.JHXB01000005_gene1347	98.2	6.41e-26	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0065776_8	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0065776_8	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0065776_8	PF01381,MF_00535,NF007257,COG1396	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0065776_9	TIGR03090	N/A	N/A	N/A	N/A
PHROG	UHGV-0065776_15	phrog_3584	179.2	0	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0065776_15	1415774.U728_484	113.0	4.94e-27	N/A	N/A
structural_annotation	UHGV-0065776_15	PF21578	N/A	N/A	N/A	N/A
PHROG	UHGV-0065776_16	phrog_38338	69.0	7.5e-20	N/A	unknown function
UniRef90	UHGV-0065776_16	UniRef90_UPI00189D2CD7	97.1	4.85e-23	Cas9 inhibitor AcrIIA9 family protein	N/A
eggNOG-mapper	UHGV-0065776_16	693746.OBV_25410	71.6	0.000000000000025	N/A	N/A
PHROG	UHGV-0065776_17	phrog_8470	274.1	0	N/A	unknown function
UniRef90	UHGV-0065776_17	UniRef90_A0A315Y141	227.0	0	PcfJ-like protein	N/A
eggNOG-mapper	UHGV-0065776_17	641112.ACOK01000073_gene2870	189.0	0	PcfJ-like protein	N/A
Pfam	UHGV-0065776_17	PF14284	N/A	N/A	PcfJ-like protein	PcfJ
structural_annotation	UHGV-0065776_17	PF14284	N/A	N/A	N/A	N/A
PHROG	UHGV-0065776_18	phrog_15609	83.9	3.4e-26	N/A	unknown function
eggNOG-mapper	UHGV-0065776_18	641112.ACOK01000073_gene2872	74.3	0.00000000000525	N/A	N/A
Pfam	UHGV-0065776_18	PF11300	N/A	N/A	N/A	DUF3102
structural_annotation	UHGV-0065776_18	PF11300,NF038070	N/A	N/A	N/A	N/A
PHROG	UHGV-0065776_19	phrog_874	153.7	1.4013e-45	N/A	unknown function
UniRef90	UHGV-0065776_19	UniRef90_A0A3P6JHM7	147.0	5.31e-40	Upf86.8	N/A
eggNOG-mapper	UHGV-0065776_19	1235793.C809_02214	149.0	1.18998e-41	N/A	N/A
structural_annotation	UHGV-0065776_19	PF04266,MF_00684,NF003443,COG3097	N/A	N/A	N/A	N/A
PHROG	UHGV-0065776_21	phrog_2118	116.9	1.8e-34	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0065776_21	UniRef90_UPI001063DBFB	140.0	1.81e-40	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0065776_21	1007096.BAGW01000031_gene126	131.0	1.12e-37	HNH endonuclease	N/A
Pfam	UHGV-0065776_21	PF14279	N/A	N/A	HNH endonuclease	HNH_5
COG	UHGV-0065776_21	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-0065776_21	COG1403	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0065776_24	246199.CUS_4371	52.4	0.00000269	N/A	N/A
PHROG	UHGV-0065776_27	phrog_16725	44.4	0.000000000002	N/A	unknown function
UniRef90	UHGV-0065776_28	UniRef90_A0A3D4L1C5	450.0	0	Methylase_S domain-containing protein	N/A
eggNOG-mapper	UHGV-0065776_28	862515.HMPREF0658_1119	75.5	0.000000000000545	Type I restriction modification DNA specificity domain	N/A
Pfam	UHGV-0065776_28	PF01420	N/A	N/A	Type I restriction modification DNA specificity domain	Methylase_S
COG	UHGV-0065776_28	COG0732	N/A	N/A	Restriction endonuclease S subunit	N/A
structural_annotation	UHGV-0065776_28	PF01420,NF007278,COG0732	N/A	N/A	N/A	N/A
PHROG	UHGV-0065776_29	phrog_11358	142.0	1.3999e-42	N/A	unknown function
UniRef90	UHGV-0065776_29	UniRef90_A0A3D4L231	475.0	0	SAM-dependent methyltransferase	N/A
eggNOG-mapper	UHGV-0065776_29	211586.SO_2993	194.0	0	site-specific DNA-methyltransferase (adenine-specific) activity	N/A
COG	UHGV-0065776_29	COG0286	N/A	N/A	Type I restriction-modification system, DNA methylase subunit	N/A
structural_annotation	UHGV-0065776_29	PF02384,MF_01872,TIGR00497,COG0286	N/A	N/A	N/A	N/A
KOfam	UHGV-0065776_31	K03111	108.4	1.1e-31	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0065776_31	phrog_44	112.7	3.8e-33	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0065776_31	UniRef90_A0A1C7GPZ4	110.0	2.43e-28	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0065776_31	718252.FP2_01010	94.0	2.78e-22	Single-strand binding protein family	N/A
Pfam	UHGV-0065776_31	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0065776_31	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0065776_31	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0065776_31	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0065776_31	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0065776_32	phrog_5889	90.9	9.6e-27	N/A	unknown function
UniRef90	UHGV-0065776_32	UniRef90_A0A1C6L075	172.0	0	Predicted HD-superfamily hydrolase	N/A
eggNOG-mapper	UHGV-0065776_32	1219626.HMPREF1639_07345	169.0	0	metal-dependent phosphohydrolase, HD sub domain	N/A
COG	UHGV-0065776_32	COG3481	N/A	N/A	3'-5' exoribonuclease YhaM, can participate in 23S rRNA maturation, HD superfamily	N/A
structural_annotation	UHGV-0065776_32	PF07514,MF_01427,NF010007,COG3481	N/A	N/A	N/A	N/A
PHROG	UHGV-0065776_33	phrog_824	153.6	0	N/A	unknown function
UniRef90	UHGV-0065776_33	UniRef90_A0A3D4L0J6	241.0	0	VRR-NUC domain-containing protein	N/A
eggNOG-mapper	UHGV-0065776_33	641107.CDLVIII_1315	130.0	1.14e-37	VRR-NUC domain	N/A
Pfam	UHGV-0065776_33	PF08774	N/A	N/A	VRR-NUC domain	VRR_NUC
structural_annotation	UHGV-0065776_33	PF08774	N/A	N/A	N/A	N/A
PHROG	UHGV-0065776_34	phrog_14853	71.3	1.4e-20	N/A	unknown function
eggNOG-mapper	UHGV-0065776_34	1235802.C823_05706	50.4	0.000000809	N/A	N/A
PHROG	UHGV-0065776_35	phrog_36	55.7	9.8e-16	transcriptional regulator	transcription regulation
UniRef90	UHGV-0065776_35	UniRef90_UPI001D05F87A	66.6	0.0000000000202	RNA polymerase subunit sigma-24	N/A
eggNOG-mapper	UHGV-0065776_35	397290.C810_01391	53.1	0.000000621	N/A	N/A
PHROG	UHGV-0065776_36	phrog_83	52.7	0.0000000000000074	terminase small subunit	head and packaging
UniRef90	UHGV-0065776_36	UniRef90_A0A374VMN9	129.0	2.8e-35	Terminase	N/A
eggNOG-mapper	UHGV-0065776_36	397288.C806_01491	120.0	2.7e-32	N/A	N/A
Pfam	UHGV-0065776_36	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
structural_annotation	UHGV-0065776_36	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
KOfam	UHGV-0065776_37	K07319	121.6	6.8e-36	yhdJ; adenine-specific DNA-methyltransferase [EC:2.1.1.72]	N/A
PHROG	UHGV-0065776_37	phrog_498	506.6	0	DNA methyltransferase	other
UniRef90	UHGV-0065776_37	UniRef90_A0A3D4L0T3	818.0	0	DNA modification methylase	N/A
eggNOG-mapper	UHGV-0065776_37	641112.ACOK01000108_gene1785	619.0	0	N/A	N/A
PADLOC	UHGV-0065776_37	MTase_II_00015	515.0	0	Type II methyltransferase	RM
Pfam	UHGV-0065776_37	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
Pfam	UHGV-0065776_37	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-0065776_37	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-0065776_37	PF01555,PF02195,MF_02015,MF_01872,NF010253,TIGR04285,COG0863,COG1475	N/A	N/A	N/A	N/A
KOfam	UHGV-0065776_38	K00558	209.0	0	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-0065776_38	phrog_38038	261.8	0	N/A	unknown function
UniRef90	UHGV-0065776_38	UniRef90_A0A3D4L194	984.0	0	Cytosine-specific methyltransferase	N/A
eggNOG-mapper	UHGV-0065776_38	1235799.C818_01027	683.0	0	C-5 cytosine-specific DNA methylase	N/A
PADLOC	UHGV-0065776_38	oMTase_00004	366.4	0	orphan methyltransferase	RM
Pfam	UHGV-0065776_38	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
NCBIFam	UHGV-0065776_38	TIGR00675.1	N/A	N/A	DNA (cytosine-5-)-methyltransferase	N/A
COG	UHGV-0065776_38	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-0065776_38	PF00145,MF_00786,TIGR00675,COG0270	N/A	N/A	N/A	N/A
PHROG	UHGV-0065776_39	phrog_2443	328.9	0	amidoligase enzyme	other
UniRef90	UHGV-0065776_39	UniRef90_A0A3D4L1B7	634.0	0	Alpha-L-fucosidase	N/A
eggNOG-mapper	UHGV-0065776_39	1235799.C818_01024	514.0	0	Putative amidoligase enzyme	N/A
AcrCatalog	UHGV-0065776_39	cluster_58247	89.0	3.78e-22	NA	N/A
Pfam	UHGV-0065776_39	PF12224	N/A	N/A	Putative amidoligase enzyme	Amidoligase_2
structural_annotation	UHGV-0065776_39	PF12224	N/A	N/A	N/A	N/A
KOfam	UHGV-0065776_40	K00682	89.8	2.9e-26	GGCT; gamma-glutamylcyclotransferase [EC:4.3.2.9]	N/A
PHROG	UHGV-0065776_40	phrog_2520	131.4	4.4e-39	gamma-glutamyl cyclotransferase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0065776_40	UniRef90_A0A3D4L222	309.0	0	Gamma-glutamylcyclotransferase	N/A
eggNOG-mapper	UHGV-0065776_40	411468.CLOSCI_00213	191.0	0	Gamma-glutamyl cyclotransferase, AIG2-like	N/A
Pfam	UHGV-0065776_40	PF06094	N/A	N/A	Gamma-glutamyl cyclotransferase, AIG2-like	GGACT
COG	UHGV-0065776_40	COG2105	N/A	N/A	Predicted gamma-glutamylamine cyclotransferase YtfP, GGCT/AIG2-like family	N/A
structural_annotation	UHGV-0065776_40	PF06094,COG2105	N/A	N/A	N/A	N/A
PHROG	UHGV-0065776_41	phrog_2945	67.8	1.1e-19	N/A	unknown function
UniRef90	UHGV-0065776_41	UniRef90_A0A0V8QIN0	78.2	1.08e-17	Hydrogenase maturation protein HypF	N/A
eggNOG-mapper	UHGV-0065776_41	1235800.C819_03969	83.6	1.4e-20	N/A	N/A
PHROG	UHGV-0065776_42	phrog_4709	106.6	8.8e-32	N/A	unknown function
eggNOG-mapper	UHGV-0065776_42	1341157.RF007C_02660	105.0	4.28e-29	N/A	N/A
AcrCatalog	UHGV-0065776_42	cluster_3300	105.0	1.88e-33	NA	N/A
PHROG	UHGV-0065776_43	phrog_57	75.0	1.7e-21	terminase small subunit	head and packaging
UniRef90	UHGV-0065776_43	UniRef90_A0A3A9BKD1	96.7	2.53e-20	Protoporphyrinogen oxidase	N/A
eggNOG-mapper	UHGV-0065776_43	445972.ANACOL_00176	115.0	3.18e-28	N/A	N/A
COG	UHGV-0065776_43	COG4220	N/A	N/A	Phage DNA packaging protein, Nu1 subunit of terminase	N/A
structural_annotation	UHGV-0065776_43	PF07471,NF033787,COG4220	N/A	N/A	N/A	N/A
KOfam	UHGV-0065776_44	K07339	58.4	1.2e-16	hicA; mRNA interferase HicA [EC:3.1.-.-]	N/A
UniRef90	UHGV-0065776_44	UniRef90_A0A415Y8D5	85.1	9.94e-21	Type II toxin-antitoxin system HicA family toxin	N/A
eggNOG-mapper	UHGV-0065776_44	592031.GCWU000322_00749	78.6	6.55e-19	HicA toxin of bacterial toxin-antitoxin,	N/A
Pfam	UHGV-0065776_44	PF07927	N/A	N/A	HicA toxin of bacterial toxin-antitoxin,	HicA_toxin
structural_annotation	UHGV-0065776_44	PF07927,COG1724	N/A	N/A	N/A	N/A
KOfam	UHGV-0065776_45	K18843	41.2	0.000000000031	hicB; antitoxin HicB	N/A
PHROG	UHGV-0065776_45	phrog_497	63.9	3.1e-18	toxin-antitoxin system HicB-like	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0065776_45	UniRef90_A0A415Y8F6	134.0	3.52e-38	HicB family protein	N/A
eggNOG-mapper	UHGV-0065776_45	888727.HMPREF9092_1410	120.0	1.77e-33	N/A	N/A
Pfam	UHGV-0065776_45	PF15919	N/A	N/A	HicB_like antitoxin of bacterial toxin-antitoxin system	HicB_lk_antitox
COG	UHGV-0065776_45	COG1598	N/A	N/A	Antitoxin component HicB of the HicAB toxin-antitoxin system	N/A
structural_annotation	UHGV-0065776_45	PF15919,COG1598	N/A	N/A	N/A	N/A
KOfam	UHGV-0065776_46	K21512	441.9	0	gpA; terminase, large subunit [EC:3.1.21.4]	N/A
PHROG	UHGV-0065776_46	phrog_15	587.2	0	terminase large subunit	head and packaging
UniRef90	UHGV-0065776_46	UniRef90_A0A3D4L0W9	1301.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0065776_46	445972.ANACOL_00177	741.0	0	Phage terminase large subunit (GpA)	N/A
Pfam	UHGV-0065776_46	PF05876	N/A	N/A	Phage terminase large subunit gpA, ATPase domain	GpA_ATPase
Pfam	UHGV-0065776_46	PF20454	N/A	N/A	Terminase large subunit gpA, endonuclease domain	GpA_nuclease
COG	UHGV-0065776_46	COG5525	N/A	N/A	Phage terminase, large subunit GpA	N/A
HAMAP	UHGV-0065776_46	MF_04144	N/A	N/A	Terminase, large subunit	N/A
structural_annotation	UHGV-0065776_46	PF05876,PF20454,MF_04144,TIGR01547,COG5525	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0065776_47	718252.FP2_00730	63.9	0.00000000000265	N/A	N/A
structural_annotation	UHGV-0065776_47	PF19645	N/A	N/A	N/A	N/A
UniRef90	UHGV-0065776_48	UniRef90_A0A3D4L276	92.8	7.1e-24	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0065776_48	1415774.U728_2928	53.9	0.00000000246	Helix-turn-helix XRE-family like proteins	N/A