UHGV-0068169 (vOTU-083499)

Viral Genome: UHGV-0068169

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0068169
vOTU ID	vOTU-083499
Representative Genome?	Yes
Source	GPD
Original genome ID	uvig_128321
Associated BioSample	SAMEA2737844
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	96.93 (High-quality)
Trimmed provirus	No
CheckV viral markers	16
CheckV host markers	1
Recoded stop codon	No

Viral Content
geNomad score	0.9752
Virus hallmark genes (geNomad)	9
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	27.48
Jumbo phage	No

Genome content
Genome length (bp)	36,188
GC content	37.52%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	44
CDS density	93%
Average CDS length (bps)	762.41
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 96.93)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0068169_1	K07273	137.8	9.90003e-41	acm; lysozyme	N/A
PHROG	UHGV-0068169_1	phrog_291	116.6	2.4e-34	endolysin	lysis
UniRef90	UHGV-0068169_1	UniRef90_A0A356C4H3	791.0	0	LysM domain-containing protein	N/A
eggNOG-mapper	UHGV-0068169_1	411470.RUMGNA_00451	153.0	2.97e-40	COG COG3757 Lyzozyme M1 (1,4-beta-N-acetylmuramidase)	N/A
Pfam	UHGV-0068169_1	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
Pfam	UHGV-0068169_1	PF01476	N/A	N/A	LysM domain	LysM
COG	UHGV-0068169_1	COG3023	N/A	N/A	N-acetyl-anhydromuramyl-L-alanine amidase AmpD	N/A
structural_annotation	UHGV-0068169_1	PF01183,NF007404,COG3757	N/A	N/A	N/A	N/A
PHROG	UHGV-0068169_2	phrog_199	56.0	4.8e-16	holin	lysis
UniRef90	UHGV-0068169_2	UniRef90_A0A174PAV2	204.0	0	Phage-related holin (Lysis protein)	N/A
eggNOG-mapper	UHGV-0068169_2	411470.RUMGNA_02086	184.0	0	N/A	N/A
Pfam	UHGV-0068169_2	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-0068169_2	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
COG	UHGV-0068169_2	COG4824	N/A	N/A	Phage-related holin (Lysis protein)	N/A
structural_annotation	UHGV-0068169_2	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
PHROG	UHGV-0068169_3	phrog_16267	145.1	0	N/A	unknown function
UniRef90	UHGV-0068169_3	UniRef90_A0A356C4L7	1763.0	0	Peptidase S74 domain-containing protein	N/A
eggNOG-mapper	UHGV-0068169_3	1294142.CINTURNW_1706	319.0	0	Phage minor structural protein	N/A
Pfam	UHGV-0068169_3	PF13884	N/A	N/A	Chaperone of endosialidase	Peptidase_S74
COG	UHGV-0068169_3	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0068169_3	PF06605,PF20086,PF18099,TIGR01665,NF033675,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0068169_4	phrog_1401	56.0	6.9e-16	N/A	unknown function
UniRef90	UHGV-0068169_4	UniRef90_UPI00077668B1	65.5	0.0000000000478	N/A	N/A
eggNOG-mapper	UHGV-0068169_4	1391647.AVSV01000003_gene1820	77.4	1.86e-16	N/A	N/A
structural_annotation	UHGV-0068169_4	PF07761	N/A	N/A	N/A	N/A
PHROG	UHGV-0068169_5	phrog_1194	72.7	4.7e-21	N/A	unknown function
eggNOG-mapper	UHGV-0068169_5	33035.JPJF01000093_gene2242	159.0	0	N/A	N/A
structural_annotation	UHGV-0068169_5	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0068169_6	phrog_1535	238.0	0	tail length tape measure protein	tail
UniRef90	UHGV-0068169_6	UniRef90_R6TDK7	404.0	0	Phage-related protein-like protein	N/A
eggNOG-mapper	UHGV-0068169_6	717606.PaecuDRAFT_3132	392.0	0	Phage-related minor tail protein	N/A
COG	UHGV-0068169_6	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-0068169_6	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0068169_7	phrog_8355	117.6	2.5e-35	N/A	unknown function
UniRef90	UHGV-0068169_7	UniRef90_UPI0006BBA9AA	170.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-0068169_7	394503.Ccel_3036	118.0	1.23e-32	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0068169_7	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0068169_7	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0068169_8	phrog_8300	63.2	3.9e-18	N/A	unknown function
eggNOG-mapper	UHGV-0068169_8	1151292.QEW_2425	58.9	0.000000000866	N/A	N/A
structural_annotation	UHGV-0068169_8	PF06896	N/A	N/A	N/A	N/A
PHROG	UHGV-0068169_9	phrog_820	107.8	8e-32	major tail protein	tail
UniRef90	UHGV-0068169_9	UniRef90_T3DDR1	184.0	0	Phage major tail 2 family protein	N/A
eggNOG-mapper	UHGV-0068169_9	1151292.QEW_2426	184.0	0	N/A	N/A
structural_annotation	UHGV-0068169_9	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0068169_10	phrog_2595	90.4	1.7e-26	head-tail connector protein	connector
UniRef90	UHGV-0068169_10	UniRef90_UPI001D068DAC	143.0	1.93001e-41	minor capsid protein	N/A
eggNOG-mapper	UHGV-0068169_10	742740.HMPREF9474_03510	130.0	2.35e-37	N/A	N/A
Pfam	UHGV-0068169_10	PF12691	N/A	N/A	Bacteriophage minor capsid protein	Minor_capsid_3
structural_annotation	UHGV-0068169_10	PF12691,COG5003	N/A	N/A	N/A	N/A
PHROG	UHGV-0068169_11	phrog_556	60.5	2.5e-17	minor head protein	head and packaging
eggNOG-mapper	UHGV-0068169_11	742740.HMPREF9474_03509	138.0	2.9e-40	N/A	N/A
structural_annotation	UHGV-0068169_11	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0068169_12	phrog_8710	124.8	3.4e-37	N/A	unknown function
eggNOG-mapper	UHGV-0068169_12	33035.JPJF01000093_gene2249	107.0	9.82e-29	N/A	N/A
structural_annotation	UHGV-0068169_12	PF10665,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0068169_13	phrog_541	63.5	3.6e-18	head-tail adaptor	connector
eggNOG-mapper	UHGV-0068169_13	742740.HMPREF9474_03507	148.0	1.4013e-44	N/A	N/A
PHROG	UHGV-0068169_14	phrog_1378	70.3	2e-20	N/A	unknown function
eggNOG-mapper	UHGV-0068169_14	1415775.U729_2606	68.2	0.000000000000102	N/A	N/A
PHROG	UHGV-0068169_15	phrog_422	357.5	0	major head protein	head and packaging
UniRef90	UHGV-0068169_15	UniRef90_A0A356C4N2	598.0	0	Capsid protein	N/A
eggNOG-mapper	UHGV-0068169_15	742740.HMPREF9474_03505	473.0	0	N/A	N/A
structural_annotation	UHGV-0068169_15	PF19821,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0068169_16	phrog_2303	129.4	2.8e-38	head scaffolding protein	head and packaging
eggNOG-mapper	UHGV-0068169_16	483218.BACPEC_01156	149.0	2.51953e-42	N/A	N/A
PHROG	UHGV-0068169_17	phrog_872	76.8	3.5e-22	N/A	unknown function
eggNOG-mapper	UHGV-0068169_17	397290.C810_05225	120.0	1.81e-33	N/A	N/A
dbAPIS	UHGV-0068169_17	APIS052	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0068169_18	PF12305	N/A	N/A	N/A	N/A
PHROG	UHGV-0068169_19	phrog_581	242.3	0	minor head protein	head and packaging
UniRef90	UHGV-0068169_19	UniRef90_A0A413YU28	607.0	0	Minor capsid protein	N/A
eggNOG-mapper	UHGV-0068169_19	33035.JPJF01000093_gene2255	437.0	0	N/A	N/A
Pfam	UHGV-0068169_19	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0068169_19	COG5585	N/A	N/A	Putative phage head morphogenesis protein, F of phage Mu or gp7 of SPP1	N/A
structural_annotation	UHGV-0068169_19	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-0068169_20	phrog_533	285.2	0	portal protein	head and packaging
UniRef90	UHGV-0068169_20	UniRef90_A0A356C6G5	957.0	0	Capsid protein	N/A
eggNOG-mapper	UHGV-0068169_20	33035.JPJF01000093_gene2257	579.0	0	N/A	N/A
structural_annotation	UHGV-0068169_20	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0068169_21	K06909	98.4	8.6e-29	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0068169_21	phrog_2	76.4	5.5e-22	terminase large subunit	head and packaging
UniRef90	UHGV-0068169_21	UniRef90_A0A356C691	942.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0068169_21	1294142.CINTURNW_1023	514.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-0068169_21	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-0068169_21	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0068169_21	PF03237,PF17289,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
KOfam	UHGV-0068169_22	K07474	157.7	0	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-0068169_22	phrog_51	157.2	0	terminase small subunit	head and packaging
UniRef90	UHGV-0068169_22	UniRef90_A0A356C6K0	361.0	0	Terminase small subunit	N/A
eggNOG-mapper	UHGV-0068169_22	1499683.CCFF01000014_gene3916	183.0	0	Terminase small subunit	N/A
Pfam	UHGV-0068169_22	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-0068169_22	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0068169_22	PF03592,COG3728	N/A	N/A	N/A	N/A
PHROG	UHGV-0068169_24	phrog_36	59.6	6.1e-17	transcriptional regulator	transcription regulation
eggNOG-mapper	UHGV-0068169_24	397290.C810_01391	113.0	3.55e-30	N/A	N/A
structural_annotation	UHGV-0068169_24	PF02996	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0068169_25	397290.C810_01505	140.0	2.46068e-42	N/A	N/A
PHROG	UHGV-0068169_27	phrog_2245	76.8	3.2e-22	nucleoside triphosphate pyrophosphohydrolase	other
UniRef90	UHGV-0068169_27	UniRef90_A0A373NRP8	89.4	1.44e-20	MazG domain-containing protein	N/A
eggNOG-mapper	UHGV-0068169_27	326426.Bbr_0313	79.3	3.1e-16	N/A	N/A
PHROG	UHGV-0068169_28	phrog_15077	116.0	6.5e-34	N/A	unknown function
UniRef90	UHGV-0068169_28	UniRef90_A0A174WLY0	214.0	0	N/A	N/A
eggNOG-mapper	UHGV-0068169_28	1280698.AUJS01000007_gene1019	209.0	0	N/A	N/A
structural_annotation	UHGV-0068169_28	PF11300,NF038070	N/A	N/A	N/A	N/A
PHROG	UHGV-0068169_29	phrog_8470	280.6	0	N/A	unknown function
UniRef90	UHGV-0068169_29	UniRef90_UPI00164C094F	232.0	0	PcfJ domain-containing protein	N/A
eggNOG-mapper	UHGV-0068169_29	483218.BACPEC_01166	420.0	0	PcfJ-like protein	N/A
Pfam	UHGV-0068169_29	PF14284	N/A	N/A	PcfJ-like protein	PcfJ
structural_annotation	UHGV-0068169_29	PF14284	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0068169_30	483218.BACPEC_01167	209.0	0	N/A	N/A
PHROG	UHGV-0068169_31	phrog_7566	99.7	1.5e-29	N/A	unknown function
eggNOG-mapper	UHGV-0068169_31	1235800.C819_00511	96.7	2.91e-24	N/A	N/A
KOfam	UHGV-0068169_32	K03469	51.6	0.000000000000018	rnhA, RNASEH1; ribonuclease HI [EC:3.1.26.4]	N/A
PHROG	UHGV-0068169_32	phrog_531	57.8	2.1e-16	Rnase H	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0068169_32	UniRef90_A0A3B8UHR5	158.0	0	RNase H type-1 domain-containing protein	N/A
eggNOG-mapper	UHGV-0068169_32	1235800.C819_00514	101.0	1.86e-25	RNase H	N/A
Pfam	UHGV-0068169_32	PF00075	N/A	N/A	RNase H	RNase_H
COG	UHGV-0068169_32	COG0328	N/A	N/A	Ribonuclease HI	N/A
structural_annotation	UHGV-0068169_32	PF00075,MF_00042,NF001236,COG0328	N/A	N/A	N/A	N/A
PHROG	UHGV-0068169_33	phrog_3584	178.7	0	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0068169_33	1235793.C809_03589	150.0	6.88038e-42	N/A	N/A
structural_annotation	UHGV-0068169_33	PF21578	N/A	N/A	N/A	N/A
KOfam	UHGV-0068169_37	K18830	47.2	0.00000000000051	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-0068169_37	phrog_8	44.3	0.0000000000038	transcriptional regulator	transcription regulation
UniRef90	UHGV-0068169_37	UniRef90_A0A356C4L0	117.0	1.96e-33	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0068169_37	1161413.HMPREF1510_1296	49.3	0.00000347	Transcriptional regulator	N/A
Pfam	UHGV-0068169_37	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0068169_37	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0068169_37	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0068169_38	K22300	56.6	6.8e-16	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0068169_38	phrog_8	55.4	0.0000000000000014	transcriptional regulator	transcription regulation
UniRef90	UHGV-0068169_38	UniRef90_A0A356C4P7	251.0	0	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0068169_38	1211819.CALK01000005_gene2436	68.6	0.00000000000216	Peptidase S24-like	N/A
Pfam	UHGV-0068169_38	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0068169_38	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-0068169_38	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0068169_39	phrog_20936	48.3	0.0000000000002	N/A	unknown function
UniRef90	UHGV-0068169_39	UniRef90_UPI0013E038FD	55.5	0.0000000145	ImmA/IrrE family metallo-endopeptidase	N/A
eggNOG-mapper	UHGV-0068169_39	1235798.C817_00619	49.3	0.00000229	N/A	N/A
structural_annotation	UHGV-0068169_39	PF06114	N/A	N/A	N/A	N/A
PHROG	UHGV-0068169_40	phrog_1847	332.0	0	N/A	unknown function
UniRef90	UHGV-0068169_40	UniRef90_A0A174S171	640.0	0	Membrane-bound metallopeptidase	N/A
eggNOG-mapper	UHGV-0068169_40	1256908.HMPREF0373_00641	507.0	0	T5orf172	N/A
Pfam	UHGV-0068169_40	PF13455	N/A	N/A	Meiotically up-regulated gene 113	MUG113
COG	UHGV-0068169_40	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
structural_annotation	UHGV-0068169_40	PF13250,NF041454	N/A	N/A	N/A	N/A
KOfam	UHGV-0068169_41	K06400	354.3	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-0068169_41	phrog_95	354.2	0	integrase	integration and excision
UniRef90	UHGV-0068169_41	UniRef90_A0A413YU13	846.0	0	Recombinase family protein	N/A
eggNOG-mapper	UHGV-0068169_41	411462.DORLON_00823	439.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-0068169_41	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-0068169_41	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-0068169_41	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-0068169_41	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0068169_41	PF00239,PF07508,PF13408,NF041201,COG1961	N/A	N/A	N/A	N/A
PHROG	UHGV-0068169_42	phrog_5763	88.4	9.1e-26	N/A	unknown function
eggNOG-mapper	UHGV-0068169_42	1033744.CAEL01000026_gene1411	112.0	1.86e-26	N/A	N/A
PHROG	UHGV-0068169_43	phrog_1281	124.2	6.8e-37	N/A	unknown function
UniRef90	UHGV-0068169_43	UniRef90_UPI00164A9B39	155.0	1.4013e-45	N/A	N/A
eggNOG-mapper	UHGV-0068169_43	936375.HMPREF1152_1710	145.0	1.61009e-42	N/A	N/A
Pfam	UHGV-0068169_43	PF13274	N/A	N/A	Antitoxin SocA-like, Panacea domain	SocA_Panacea
COG	UHGV-0068169_43	COG3600	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0068169_43	PF13274,COG3600	N/A	N/A	N/A	N/A
KOfam	UHGV-0068169_44	K06334	44.2	0.0000000000031	cotJC; spore coat protein JC	N/A
UniRef90	UHGV-0068169_44	UniRef90_G4KP59	62.8	0.00000000000407	Putative manganese catalase	N/A
eggNOG-mapper	UHGV-0068169_44	483218.BACPEC_01185	65.1	0.00000000000017	catalase activity	N/A
COG	UHGV-0068169_44	COG3546	N/A	N/A	Mn-containing catalase (includes spore coat protein CotJC)	N/A