UHGV-0068492 (vOTU-077835)

Viral Genome: UHGV-0068492

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0068492
vOTU ID	vOTU-077835
Representative Genome?	Yes
Source	GPD
Original genome ID	uvig_119300
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	90.4 (High-quality)
Trimmed provirus	No
CheckV viral markers	17
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9804
Virus hallmark genes (geNomad)	12
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	36.56
Jumbo phage	No

Genome content
Genome length (bp)	33,245
GC content	40.89%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	56
CDS density	94%
Average CDS length (bps)	556.23
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 90.4)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0068492_1	K06400	381.8	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-0068492_1	phrog_95	396.9	0	integrase	integration and excision
UniRef90	UHGV-0068492_1	UniRef90_A6BEV3	960.0	0	Resolvase, N-terminal domain protein	N/A
eggNOG-mapper	UHGV-0068492_1	411462.DORLON_00823	960.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-0068492_1	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-0068492_1	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-0068492_1	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-0068492_1	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0068492_1	PF00239,PF07508,PF13408,NF041201,COG1961	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0068492_2	742740.HMPREF9474_00280	53.9	0.00000281	N/A	N/A
structural_annotation	UHGV-0068492_2	MF_00867	N/A	N/A	N/A	N/A
PHROG	UHGV-0068492_3	phrog_87	83.3	2.2e-24	metallo-protease	other
UniRef90	UHGV-0068492_3	UniRef90_UPI001C0252A2	263.0	0	ImmA/IrrE family metallo-endopeptidase	N/A
eggNOG-mapper	UHGV-0068492_3	1235802.C823_04751	184.0	0	IrrE N-terminal-like domain	N/A
Pfam	UHGV-0068492_3	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
COG	UHGV-0068492_3	COG2856	N/A	N/A	Zn-dependent peptidase ImmA, M78 family	N/A
structural_annotation	UHGV-0068492_3	PF06114,COG2856	N/A	N/A	N/A	N/A
PHROG	UHGV-0068492_4	phrog_8	59.7	6.8e-17	transcriptional regulator	transcription regulation
UniRef90	UHGV-0068492_4	UniRef90_R6SHW8	236.0	0	Helix-turn-helix	N/A
eggNOG-mapper	UHGV-0068492_4	411459.RUMOBE_00961	137.0	1.27e-39	Bacteriophage CI repressor helix-turn-helix domain	N/A
Pfam	UHGV-0068492_4	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0068492_4	COG3093	N/A	N/A	Plasmid maintenance system antidote protein VapI, contains XRE-type HTH domain	N/A
structural_annotation	UHGV-0068492_4	PF12844,NF041951,COG1396	N/A	N/A	N/A	N/A
UniRef90	UHGV-0068492_5	UniRef90_A0A173SCE0	111.0	3.76e-31	DNA binding domain, excisionase family	N/A
eggNOG-mapper	UHGV-0068492_5	1449050.JNLE01000005_gene3960	85.1	2.09e-21	Helix-turn-helix domain	N/A
Pfam	UHGV-0068492_5	PF12728	N/A	N/A	Helix-turn-helix domain	HTH_17
NCBIFam	UHGV-0068492_5	TIGR01764.1	N/A	N/A	excisionase family DNA-binding protein	N/A
structural_annotation	UHGV-0068492_5	PF12728,NF040990,COG3311	N/A	N/A	N/A	N/A
PHROG	UHGV-0068492_7	phrog_32168	72.8	3.5e-21	N/A	unknown function
structural_annotation	UHGV-0068492_7	PF13248,MF_00788,NF041910,COG1552	N/A	N/A	N/A	N/A
UniRef90	UHGV-0068492_8	UniRef90_A0A6L8RW85	182.0	0	N/A	N/A
Pfam	UHGV-0068492_8	PF20037	N/A	N/A	N/A	DUF6440
structural_annotation	UHGV-0068492_8	PF20037	N/A	N/A	N/A	N/A
UniRef90	UHGV-0068492_10	UniRef90_UPI001F2FF670	75.5	6.34e-17	CbrC family protein	N/A
PHROG	UHGV-0068492_13	phrog_11717	143.9	7.30076e-43	N/A	unknown function
eggNOG-mapper	UHGV-0068492_13	508419.F8J181_9CAUD	154.0	7.00649e-45	N/A	N/A
structural_annotation	UHGV-0068492_13	PF06420,TIGR00607,COG4712	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0068492_14	411468.CLOSCI_00314	135.0	1.53e-37	N/A	N/A
structural_annotation	UHGV-0068492_14	PF05772,NF007281	N/A	N/A	N/A	N/A
PHROG	UHGV-0068492_15	phrog_7566	89.4	2.7e-26	N/A	unknown function
UniRef90	UHGV-0068492_15	UniRef90_UPI001570B64C	211.0	0	phosphoenolpyruvate carboxykinase	N/A
eggNOG-mapper	UHGV-0068492_15	1304866.K413DRAFT_1198	67.0	0.000000000000331	N/A	N/A
PHROG	UHGV-0068492_16	phrog_2113	42.5	0.0000000000085	N/A	unknown function
eggNOG-mapper	UHGV-0068492_16	1160721.RBI_I00213	50.8	0.00000126	N/A	N/A
structural_annotation	UHGV-0068492_16	PF21715	N/A	N/A	N/A	N/A
PHROG	UHGV-0068492_17	phrog_244	75.8	7.7e-22	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0068492_17	33035.JPJF01000122_gene2460	153.0	0	N/A	N/A
structural_annotation	UHGV-0068492_17	PF01870,MF_01490,NF040854,COG1591	N/A	N/A	N/A	N/A
PHROG	UHGV-0068492_18	phrog_10469	100.9	1.3e-29	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0068492_18	UniRef90_A0A417QFV0	249.0	0	Transcriptional regulator	N/A
eggNOG-mapper	UHGV-0068492_18	411490.ANACAC_00800	202.0	0	N/A	N/A
structural_annotation	UHGV-0068492_18	PF01475,NF006999,COG0735	N/A	N/A	N/A	N/A
PHROG	UHGV-0068492_19	phrog_59	50.4	0.000000000000029	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0068492_19	UniRef90_UPI00156F191E	417.0	0	NUMOD4 domain-containing protein	N/A
eggNOG-mapper	UHGV-0068492_19	1410650.JHWL01000037_gene604	125.0	1.31e-33	N/A	N/A
Pfam	UHGV-0068492_19	PF07463	N/A	N/A	NUMOD4 motif	NUMOD4
structural_annotation	UHGV-0068492_19	PF13392	N/A	N/A	N/A	N/A
KOfam	UHGV-0068492_20	K00390	80.9	2.7e-24	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	N/A
PHROG	UHGV-0068492_20	phrog_424	95.3	5.2e-28	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0068492_20	UniRef90_A0A373SW63	684.0	0	PAPS_reduct domain-containing protein	N/A
eggNOG-mapper	UHGV-0068492_20	1235800.C819_02256	600.0	0	Phosphoadenosine phosphosulfate reductase family	N/A
Pfam	UHGV-0068492_20	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-0068492_20	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-0068492_20	PF01507,MF_00063,TIGR00434,COG0175	N/A	N/A	N/A	N/A
PHROG	UHGV-0068492_21	phrog_3253	62.3	3.4e-18	N/A	unknown function
UniRef90	UHGV-0068492_21	UniRef90_A0A355KVS1	50.4	0.000000724	Resolvase	N/A
eggNOG-mapper	UHGV-0068492_21	411461.DORFOR_00013	102.0	4.84e-28	N/A	N/A
PHROG	UHGV-0068492_22	phrog_2600	98.3	1.2e-28	N/A	unknown function
eggNOG-mapper	UHGV-0068492_22	742740.HMPREF9474_03130	115.0	2.64e-29	N/A	N/A
eggNOG-mapper	UHGV-0068492_23	1449343.JQLQ01000002_gene1542	52.4	0.000000729	N/A	N/A
PHROG	UHGV-0068492_24	phrog_25456	71.6	1.3e-21	N/A	unknown function
PHROG	UHGV-0068492_25	phrog_924	49.9	0.000000000000076	N/A	unknown function
UniRef90	UHGV-0068492_25	UniRef90_A0A893WE10	197.0	0	N/A	N/A
eggNOG-mapper	UHGV-0068492_25	411461.DORFOR_01155	101.0	8.49e-27	N/A	N/A
Pfam	UHGV-0068492_25	PF04448	N/A	N/A	N/A	DUF551
structural_annotation	UHGV-0068492_25	PF04448,NF041588	N/A	N/A	N/A	N/A
PHROG	UHGV-0068492_28	phrog_7024	88.5	4.4e-26	N/A	unknown function
eggNOG-mapper	UHGV-0068492_28	1410653.JHVC01000011_gene971	53.5	0.0000000216	N/A	N/A
AcrCatalog	UHGV-0068492_28	cluster_1398	53.5	0.000000000000667	NA	N/A
PHROG	UHGV-0068492_29	phrog_36	56.2	7.4e-16	transcriptional regulator	transcription regulation
UniRef90	UHGV-0068492_29	UniRef90_UPI0018988F04	239.0	0	sigma-70 family RNA polymerase sigma factor	N/A
eggNOG-mapper	UHGV-0068492_29	1280698.AUJS01000007_gene1031	231.0	0	N/A	N/A
Pfam	UHGV-0068492_29	PF04545	N/A	N/A	Sigma-70, region 4	Sigma70_r4
structural_annotation	UHGV-0068492_29	PF04545,MF_00245,NF001068,COG2739	N/A	N/A	N/A	N/A
PHROG	UHGV-0068492_30	phrog_9125	254.4	0	N/A	unknown function
structural_annotation	UHGV-0068492_30	PF19079,TIGR04203	N/A	N/A	N/A	N/A
PHROG	UHGV-0068492_31	phrog_2990	79.5	3.4e-23	N/A	unknown function
UniRef90	UHGV-0068492_31	UniRef90_A0A417CPS7	88.6	1.12e-19	N/A	N/A
eggNOG-mapper	UHGV-0068492_31	411462.DORLON_00798	177.0	0	N/A	N/A
PHROG	UHGV-0068492_32	phrog_2412	140.9	5.70048e-42	N/A	unknown function
UniRef90	UHGV-0068492_32	UniRef90_UPI001E414EFE	159.0	0	KGG domain-containing protein	N/A
eggNOG-mapper	UHGV-0068492_32	742723.HMPREF9477_00912	195.0	0	N/A	N/A
KOfam	UHGV-0068492_33	K06909	95.8	5.7e-28	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0068492_33	phrog_2	95.8	8.3e-28	terminase large subunit	head and packaging
UniRef90	UHGV-0068492_33	UniRef90_A0A173ZBW3	881.0	0	Phage terminase, large subunit, PBSX family	N/A
eggNOG-mapper	UHGV-0068492_33	742765.HMPREF9457_02119	853.0	0	Terminase-like family	N/A
Pfam	UHGV-0068492_33	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
NCBIFam	UHGV-0068492_33	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0068492_33	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0068492_33	PF04466,PF20441,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0068492_34	phrog_533	333.5	0	portal protein	head and packaging
UniRef90	UHGV-0068492_34	UniRef90_A0A174JNH8	879.0	0	Phage portal protein, putative, A118 family	N/A
eggNOG-mapper	UHGV-0068492_34	742765.HMPREF9457_02120	785.0	0	N/A	N/A
structural_annotation	UHGV-0068492_34	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0068492_35	phrog_21033	372.4	0	N/A	unknown function
UniRef90	UHGV-0068492_35	UniRef90_A0A173VG74	1032.0	0	Phage minor capsid protein 2	N/A
eggNOG-mapper	UHGV-0068492_35	742765.HMPREF9457_02121	768.0	0	N/A	N/A
Pfam	UHGV-0068492_35	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0068492_35	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0068492_35	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-0068492_36	phrog_3711	91.5	4.7e-27	N/A	unknown function
eggNOG-mapper	UHGV-0068492_36	411462.DORLON_00789	136.0	6.26002e-41	N/A	N/A
PHROG	UHGV-0068492_37	phrog_194	105.1	8.2e-31	head scaffolding protein	head and packaging
UniRef90	UHGV-0068492_37	UniRef90_A0A1C5W5U5	324.0	0	Phage minor structural protein GP20	N/A
eggNOG-mapper	UHGV-0068492_37	742765.HMPREF9457_02126	298.0	0	COG NOG36366 non supervised orthologous group	N/A
Pfam	UHGV-0068492_37	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-0068492_37	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0068492_38	phrog_422	210.6	0	major head protein	head and packaging
eggNOG-mapper	UHGV-0068492_38	411470.RUMGNA_02219	464.0	0	N/A	N/A
structural_annotation	UHGV-0068492_38	PF21703,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
PHROG	UHGV-0068492_39	phrog_541	76.8	2.7e-22	head-tail adaptor	connector
UniRef90	UHGV-0068492_39	UniRef90_C4IFE6	57.0	0.0000000784	Putative gp8	N/A
eggNOG-mapper	UHGV-0068492_39	632245.CLP_1650	57.0	0.0000000131	N/A	N/A
PHROG	UHGV-0068492_40	phrog_3366	146.2	1.20512e-43	N/A	unknown function
eggNOG-mapper	UHGV-0068492_40	411462.DORLON_00784	275.0	0	N/A	N/A
Pfam	UHGV-0068492_40	PF20536	N/A	N/A	N/A	DUF6751
structural_annotation	UHGV-0068492_40	PF20536,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0068492_41	phrog_556	152.7	1.4013e-45	minor head protein	head and packaging
UniRef90	UHGV-0068492_41	UniRef90_UPI00093128B4	191.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0068492_41	411462.DORLON_00783	256.0	0	N/A	N/A
structural_annotation	UHGV-0068492_41	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0068492_42	phrog_3266	144.8	2.60642e-43	tail completion	connector
eggNOG-mapper	UHGV-0068492_42	411462.DORLON_00782	254.0	0	N/A	N/A
structural_annotation	UHGV-0068492_42	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0068492_43	phrog_3099	169.6	0	N/A	unknown function
eggNOG-mapper	UHGV-0068492_43	411462.DORLON_00781	329.0	0	N/A	N/A
structural_annotation	UHGV-0068492_43	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0068492_44	phrog_4450	125.7	2.1e-37	N/A	unknown function
eggNOG-mapper	UHGV-0068492_44	411462.DORLON_00780	278.0	0	N/A	N/A
Pfam	UHGV-0068492_44	PF20378	N/A	N/A	N/A	DUF6673
structural_annotation	UHGV-0068492_44	PF20378	N/A	N/A	N/A	N/A
PHROG	UHGV-0068492_45	phrog_706	177.4	0	N/A	unknown function
UniRef90	UHGV-0068492_45	UniRef90_A6BEQ8	381.0	0	Bacteriophage Gp15 protein	N/A
eggNOG-mapper	UHGV-0068492_45	411462.DORLON_00779	381.0	0	COG NOG24969 non supervised orthologous group	N/A
Pfam	UHGV-0068492_45	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0068492_45	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0068492_46	phrog_5602	42.5	0.0000000000086	N/A	unknown function
eggNOG-mapper	UHGV-0068492_46	411461.DORFOR_00736	105.0	8.65e-30	N/A	N/A
structural_annotation	UHGV-0068492_46	PF10122,COG4416	N/A	N/A	N/A	N/A
PHROG	UHGV-0068492_47	phrog_19074	477.6	0	N/A	unknown function
UniRef90	UHGV-0068492_47	UniRef90_A6BEQ7	1367.0	0	Phage tail tape measure protein, TP901 family	N/A
eggNOG-mapper	UHGV-0068492_47	411462.DORLON_00777	1367.0	0	Phage-related minor tail protein	N/A
Pfam	UHGV-0068492_47	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
NCBIFam	UHGV-0068492_47	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
COG	UHGV-0068492_47	COG5283	N/A	N/A	Phage-related tail protein	N/A
structural_annotation	UHGV-0068492_47	PF20155,COG3941	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0068492_48	411462.DORLON_00776	535.0	0	N/A	N/A
structural_annotation	UHGV-0068492_48	PF16774,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0068492_49	phrog_538	211.8	0	minor tail protein	tail
UniRef90	UHGV-0068492_49	UniRef90_UPI001F3E20C1	303.0	0	siphovirus ReqiPepy6 Gp37-like family protein	N/A
eggNOG-mapper	UHGV-0068492_49	411462.DORLON_00775	615.0	0	N/A	N/A
Pfam	UHGV-0068492_49	PF14594	N/A	N/A	Siphovirus ReqiPepy6 Gp37-like protein	Sipho_Gp37
structural_annotation	UHGV-0068492_49	PF14594,TIGR01665,COG4379	N/A	N/A	N/A	N/A
PHROG	UHGV-0068492_50	phrog_25635	253.5	0	N/A	unknown function
UniRef90	UHGV-0068492_50	UniRef90_A0A6L8RVX5	320.0	0	H_lectin domain-containing protein	N/A
eggNOG-mapper	UHGV-0068492_50	411462.DORLON_00774	319.0	0	N/A	N/A
PHROG	UHGV-0068492_51	phrog_12931	134.6	3.5e-40	N/A	unknown function
eggNOG-mapper	UHGV-0068492_51	411462.DORLON_00773	230.0	0	N/A	N/A
PHROG	UHGV-0068492_52	phrog_19695	121.6	7.6e-36	N/A	unknown function
eggNOG-mapper	UHGV-0068492_52	411462.DORLON_00772	191.0	0	N/A	N/A
structural_annotation	UHGV-0068492_52	PF19714	N/A	N/A	N/A	N/A
KOfam	UHGV-0068492_53	K21478	79.1	3.3e-23	icaB; poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase [EC:3.5.1.-]	N/A
UniRef90	UHGV-0068492_53	UniRef90_A0A367G9J3	335.0	0	NodB homology domain-containing protein	N/A
eggNOG-mapper	UHGV-0068492_53	411462.DORLON_00771	298.0	0	N/A	N/A
Pfam	UHGV-0068492_53	PF01522	N/A	N/A	Polysaccharide deacetylase	Polysacc_deac_1
PHROG	UHGV-0068492_54	phrog_1009	43.9	0.0000000000038	N/A	unknown function
UniRef90	UHGV-0068492_54	UniRef90_A0A173RD60	183.0	0	Branched-chain amino acid ABC transporter permease	N/A
eggNOG-mapper	UHGV-0068492_54	742765.HMPREF9457_03364	173.0	0	N/A	N/A
PHROG	UHGV-0068492_55	phrog_1129	77.0	1.7e-22	holin	lysis
UniRef90	UHGV-0068492_55	UniRef90_UPI001F15FE24	153.0	0	phage holin family protein	N/A
eggNOG-mapper	UHGV-0068492_55	411461.DORFOR_00721	175.0	0	N/A	N/A
Pfam	UHGV-0068492_55	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0068492_55	PF06946	N/A	N/A	N/A	N/A