UHGV-0071795 (vOTU-087009)

Viral Genome: UHGV-0071795

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0071795
vOTU ID	vOTU-087009
Representative Genome?	Yes
Source	GPD
Original genome ID	uvig_115598
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	98.1 (High-quality)
Trimmed provirus	No
CheckV viral markers	21
CheckV host markers	2
Recoded stop codon	No

Viral Content
geNomad score	0.9752
Virus hallmark genes (geNomad)	11
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	33.46
Jumbo phage	No

Genome content
Genome length (bp)	34,484
GC content	42.63%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	55
CDS density	93%
Average CDS length (bps)	580.42
Total tRNA genes	1
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 98.1)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0071795_1	K06400	245.5	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-0071795_1	phrog_95	257.7	0	integrase	integration and excision
UniRef90	UHGV-0071795_1	UniRef90_A0A374E9M4	1016.0	0	Recombinase family protein	N/A
eggNOG-mapper	UHGV-0071795_1	97139.C824_00068	712.0	0	Recombinase	N/A
Pfam	UHGV-0071795_1	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-0071795_1	PF07508	N/A	N/A	Recombinase	Recombinase
COG	UHGV-0071795_1	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0071795_1	PF07508,PF00239,NF041201,COG1961	N/A	N/A	N/A	N/A
PHROG	UHGV-0071795_2	phrog_8279	71.5	8.7e-21	N/A	unknown function
UniRef90	UHGV-0071795_2	UniRef90_UPI00191DFC1A	304.0	0	N/A	N/A
eggNOG-mapper	UHGV-0071795_2	742723.HMPREF9477_00941	287.0	0	dextransucrase activity	N/A
Pfam	UHGV-0071795_2	PF14020	N/A	N/A	N/A	DUF4236
COG	UHGV-0071795_2	COG3118	N/A	N/A	Chaperedoxin CnoX, contains thioredoxin-like and TPR-like domains, YbbN/TrxSC family	N/A
structural_annotation	UHGV-0071795_2	PF14020,PF21602	N/A	N/A	N/A	N/A
KOfam	UHGV-0071795_4	K18830	68.5	1.2e-19	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-0071795_4	phrog_4	51.6	0.000000000000024	transcriptional repressor	transcription regulation
UniRef90	UHGV-0071795_4	UniRef90_A0A1Q6K9L5	232.0	0	Transcriptional regulator	N/A
eggNOG-mapper	UHGV-0071795_4	1280698.AUJS01000007_gene1002	154.0	0	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0071795_4	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0071795_4	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0071795_4	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0071795_10	phrog_3584	155.2	0	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0071795_10	665950.HMPREF1025_02552	316.0	0	N/A	N/A
structural_annotation	UHGV-0071795_10	PF21578,NF041486	N/A	N/A	N/A	N/A
KOfam	UHGV-0071795_11	K03469	63.4	5.2e-18	rnhA, RNASEH1; ribonuclease HI [EC:3.1.26.4]	N/A
PHROG	UHGV-0071795_11	phrog_531	66.5	4.8e-19	Rnase H	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0071795_11	UniRef90_D4M578	286.0	0	Ribonuclease HI	N/A
eggNOG-mapper	UHGV-0071795_11	665950.HMPREF1025_02551	148.0	5.04467e-44	RNase H	N/A
Pfam	UHGV-0071795_11	PF00075	N/A	N/A	RNase H	RNase_H
COG	UHGV-0071795_11	COG0328	N/A	N/A	Ribonuclease HI	N/A
structural_annotation	UHGV-0071795_11	PF00075,MF_00042,NF001236,COG0328	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0071795_12	1280698.AUJS01000007_gene1016	232.0	0	N/A	N/A
PHROG	UHGV-0071795_13	phrog_4433	70.4	2.9e-24	N/A	unknown function
eggNOG-mapper	UHGV-0071795_13	1280698.AUJS01000007_gene1017	188.0	0	N/A	N/A
PHROG	UHGV-0071795_14	phrog_8470	231.8	0	N/A	unknown function
UniRef90	UHGV-0071795_14	UniRef90_UPI001C01E393	581.0	0	PcfJ domain-containing protein	N/A
eggNOG-mapper	UHGV-0071795_14	1280698.AUJS01000007_gene1018	853.0	0	N/A	N/A
Pfam	UHGV-0071795_14	PF14284	N/A	N/A	PcfJ-like protein	PcfJ
structural_annotation	UHGV-0071795_14	PF14284	N/A	N/A	N/A	N/A
PHROG	UHGV-0071795_15	phrog_15077	93.7	3.6e-27	N/A	unknown function
UniRef90	UHGV-0071795_15	UniRef90_A0A3A6HZA9	237.0	0	N/A	N/A
eggNOG-mapper	UHGV-0071795_15	1280698.AUJS01000007_gene1019	377.0	0	N/A	N/A
structural_annotation	UHGV-0071795_15	PF11300,NF033725	N/A	N/A	N/A	N/A
PHROG	UHGV-0071795_16	phrog_7566	80.7	1.2e-23	N/A	unknown function
eggNOG-mapper	UHGV-0071795_16	665950.HMPREF1025_02547	143.0	1.54003e-42	N/A	N/A
PHROG	UHGV-0071795_19	phrog_8684	85.5	5.6e-26	N/A	unknown function
UniRef90	UHGV-0071795_19	UniRef90_UPI000CF845A0	274.0	0	YopX family protein	N/A
eggNOG-mapper	UHGV-0071795_19	1235800.C819_02639	98.6	1.87e-24	YopX protein	N/A
Pfam	UHGV-0071795_19	PF09643	N/A	N/A	YopX protein	YopX
NCBIFam	UHGV-0071795_19	TIGR01671.1	N/A	N/A	phage conserved hypothetical protein TIGR01671	N/A
structural_annotation	UHGV-0071795_19	PF09643,TIGR01671	N/A	N/A	N/A	N/A
KOfam	UHGV-0071795_20	K18830	45.8	0.0000000000014	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-0071795_20	phrog_8	45.8	0.0000000000014	transcriptional regulator	transcription regulation
UniRef90	UHGV-0071795_20	UniRef90_A0A844KFT8	143.0	2.32616e-43	Helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0071795_20	1048834.TC41_2515	48.9	0.00000131	sequence-specific DNA binding	N/A
Pfam	UHGV-0071795_20	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0071795_20	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
PHROG	UHGV-0071795_23	phrog_36	64.1	2.6e-18	transcriptional regulator	transcription regulation
UniRef90	UHGV-0071795_23	UniRef90_A0A416MN03	128.0	2.39e-35	Sigma70_r4 domain-containing protein	N/A
eggNOG-mapper	UHGV-0071795_23	1256908.HMPREF0373_00671	204.0	0	N/A	N/A
structural_annotation	UHGV-0071795_23	PF04545,MF_00245,TIGR01636,COG2739	N/A	N/A	N/A	N/A
PHROG	UHGV-0071795_25	phrog_338	59.9	5.6e-17	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0071795_25	UniRef90_A0A3E4GMG2	208.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0071795_25	748224.HMPREF9436_01465	169.0	0	N/A	N/A
PHROG	UHGV-0071795_26	phrog_9	171.4	0	terminase large subunit	head and packaging
UniRef90	UHGV-0071795_26	UniRef90_UPI001D0087E2	874.0	0	terminase large subunit	N/A
eggNOG-mapper	UHGV-0071795_26	1123263.AUKY01000112_gene2060	692.0	0	phage terminase, large subunit	N/A
COG	UHGV-0071795_26	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0071795_26	PF20441,PF03354,MF_04146,NF033889,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0071795_27	phrog_104	239.7	0	portal protein	head and packaging
UniRef90	UHGV-0071795_27	UniRef90_A0A174L3Q9	949.0	0	Phage portal protein, SPP1 Gp6-like	N/A
eggNOG-mapper	UHGV-0071795_27	1123263.AUKY01000112_gene2059	579.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0071795_27	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0071795_27	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0071795_28	phrog_193	157.6	0	head maturation protease	head and packaging
UniRef90	UHGV-0071795_28	UniRef90_A0A6N8H118	271.0	0	CdiA_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0071795_28	748224.HMPREF9436_01469	283.0	0	N/A	N/A
COG	UHGV-0071795_28	COG5529	N/A	N/A	Phage-encoded DNA-binding protein ECs1768, contains HTH and DnaT DNA-binding domains	N/A
PHROG	UHGV-0071795_30	phrog_355	62.2	7.8e-18	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0071795_30	UniRef90_A0A396KGT7	209.0	0	N/A	N/A
eggNOG-mapper	UHGV-0071795_30	97138.C820_00250	130.0	4.81e-38	N/A	N/A
Pfam	UHGV-0071795_30	PF14359	N/A	N/A	N/A	DUF4406
structural_annotation	UHGV-0071795_30	PF14359,COG3613	N/A	N/A	N/A	N/A
PHROG	UHGV-0071795_32	phrog_2428	95.6	4e-28	N/A	unknown function
UniRef90	UHGV-0071795_32	UniRef90_A0A396QA65	248.0	0	ABC transporter ATPase	N/A
eggNOG-mapper	UHGV-0071795_32	632245.CLP_1645	192.0	0	N/A	N/A
dbAPIS	UHGV-0071795_32	APIS024	N/A	N/A	Tad1 proteins are not an enzymes, but are 'sponges' that bind and sequester the immune signaling molecule (cyclic ADP-ribose or gcADPR) produced by TIR-domain proteins, thus decoupling phage sensing from immune effector activation and rendering Thoeris inactive.	N/A
PHROG	UHGV-0071795_33	phrog_233	86.6	5.5e-25	head scaffolding protein	head and packaging
UniRef90	UHGV-0071795_33	UniRef90_A0A3E4GMR3	274.0	0	N/A	N/A
eggNOG-mapper	UHGV-0071795_33	1408304.JAHA01000007_gene1323	102.0	2.35e-26	N/A	N/A
Pfam	UHGV-0071795_33	PF14265	N/A	N/A	N/A	DUF4355
structural_annotation	UHGV-0071795_33	PF14265	N/A	N/A	N/A	N/A
PHROG	UHGV-0071795_34	phrog_10	107.5	1.7e-31	major head protein	head and packaging
UniRef90	UHGV-0071795_34	UniRef90_A0A174L023	567.0	0	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
eggNOG-mapper	UHGV-0071795_34	205876.Q855V6_9CAUD	297.0	0	peptidase activity	N/A
Pfam	UHGV-0071795_34	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0071795_34	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
structural_annotation	UHGV-0071795_34	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0071795_36	phrog_137	60.4	2.9e-17	head-tail adaptor Ad1	connector
UniRef90	UHGV-0071795_36	UniRef90_UPI0015704514	185.0	0	Gp19/Gp15/Gp42 family protein	N/A
eggNOG-mapper	UHGV-0071795_36	742742.HMPREF9452_01301	51.2	0.00000233	Phage protein Gp19/Gp15/Gp42	N/A
Pfam	UHGV-0071795_36	PF09355	N/A	N/A	N/A	Phage_Gp19
structural_annotation	UHGV-0071795_36	PF09355	N/A	N/A	N/A	N/A
PHROG	UHGV-0071795_37	phrog_501	93.7	1.6e-27	head closure Hc1	connector
eggNOG-mapper	UHGV-0071795_37	1280698.AUJS01000007_gene1041	184.0	0	N/A	N/A
structural_annotation	UHGV-0071795_37	PF12206,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0071795_38	phrog_387	41.9	0.0000000000078	neck protein	connector
eggNOG-mapper	UHGV-0071795_38	908337.HMPREF9257_0534	52.0	0.0000000567	N/A	N/A
PHROG	UHGV-0071795_39	phrog_123	55.8	8.7e-16	tail terminator	connector
eggNOG-mapper	UHGV-0071795_39	1280698.AUJS01000007_gene1043	162.0	0	N/A	N/A
structural_annotation	UHGV-0071795_39	PF06141	N/A	N/A	N/A	N/A
PHROG	UHGV-0071795_40	phrog_117	184.2	0	major tail protein	tail
UniRef90	UHGV-0071795_40	UniRef90_UPI00156E6ACC	307.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-0071795_40	1280698.AUJS01000007_gene1044	269.0	0	domain, Protein	N/A
COG	UHGV-0071795_40	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0071795_40	PF04630,TIGR01603,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0071795_41	phrog_1526	106.3	1.5e-31	N/A	unknown function
eggNOG-mapper	UHGV-0071795_41	665950.HMPREF1025_02524	92.8	1.14e-23	N/A	N/A
PHROG	UHGV-0071795_42	phrog_1633	145.8	1.30321e-43	N/A	unknown function
UniRef90	UHGV-0071795_42	UniRef90_UPI0006C2F0F2	207.0	0	N/A	N/A
eggNOG-mapper	UHGV-0071795_42	1280698.AUJS01000007_gene1046	145.0	1.30321e-43	N/A	N/A
Pfam	UHGV-0071795_42	PF17318	N/A	N/A	N/A	DUF5361
structural_annotation	UHGV-0071795_42	PF17318	N/A	N/A	N/A	N/A
PHROG	UHGV-0071795_43	phrog_6900	264.4	0	tail length tape measure protein	tail
UniRef90	UHGV-0071795_43	UniRef90_A0A174L0T5	805.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0071795_43	1280698.AUJS01000007_gene1047	558.0	0	nuclear chromosome segregation	N/A
COG	UHGV-0071795_43	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0071795_43	PF20155,MF_04138,COG5281	N/A	N/A	N/A	N/A
PHROG	UHGV-0071795_44	phrog_33	52.9	0.0000000000000089	distal tail protein Dit	tail
UniRef90	UHGV-0071795_44	UniRef90_UPI00156E3DDD	521.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-0071795_44	1280698.AUJS01000007_gene1048	384.0	0	N/A	N/A
structural_annotation	UHGV-0071795_44	PF16774,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0071795_45	phrog_538	211.1	0	minor tail protein	tail
UniRef90	UHGV-0071795_45	UniRef90_UPI001F3E20C1	455.0	0	siphovirus ReqiPepy6 Gp37-like family protein	N/A
eggNOG-mapper	UHGV-0071795_45	1280698.AUJS01000007_gene1049	448.0	0	N/A	N/A
Pfam	UHGV-0071795_45	PF14594	N/A	N/A	Siphovirus ReqiPepy6 Gp37-like protein	Sipho_Gp37
structural_annotation	UHGV-0071795_45	PF14594,TIGR01665,COG4379	N/A	N/A	N/A	N/A
PHROG	UHGV-0071795_46	phrog_25635	261.3	0	N/A	unknown function
eggNOG-mapper	UHGV-0071795_46	1280698.AUJS01000007_gene1050	251.0	0	N/A	N/A
structural_annotation	UHGV-0071795_46	PF20747,NF012201	N/A	N/A	N/A	N/A
PHROG	UHGV-0071795_47	phrog_30034	137.4	1.2e-40	N/A	unknown function
UniRef90	UHGV-0071795_47	UniRef90_R5QX84	160.0	0	Carbohydrate binding domain protein	N/A
eggNOG-mapper	UHGV-0071795_47	411460.RUMTOR_02099	159.0	0	N/A	N/A
Pfam	UHGV-0071795_47	PF02839	N/A	N/A	Carbohydrate-binding module family 5/12	CBM_5_12
KOfam	UHGV-0071795_49	K13276	82.6	2.9e-24	bpr; bacillopeptidase F [EC:3.4.21.-]	N/A
PHROG	UHGV-0071795_49	phrog_11157	207.9	0	N/A	unknown function
UniRef90	UHGV-0071795_49	UniRef90_UPI0006C53CD4	554.0	0	Ig-like domain-containing protein	N/A
eggNOG-mapper	UHGV-0071795_49	411461.DORFOR_00726	188.0	0	N/A	N/A
Pfam	UHGV-0071795_49	PF17957	N/A	N/A	Bacterial Ig domain	Big_7
Pfam	UHGV-0071795_49	PF09136	N/A	N/A	Glucodextranase, domain B	Glucodextran_B
COG	UHGV-0071795_49	COG3292	N/A	N/A	Periplasmic ligand-binding sensor domain	N/A
structural_annotation	UHGV-0071795_49	PF09136,PF13205,PF13754,MF_04116,NF032891,COG2372,COG5456	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0071795_51	742765.HMPREF9457_03366	49.3	0.00000194	N/A	N/A
structural_annotation	UHGV-0071795_51	PF07703,NF038114,COG5501	N/A	N/A	N/A	N/A
PHROG	UHGV-0071795_52	phrog_1009	50.9	0.000000000000025	N/A	unknown function
UniRef90	UHGV-0071795_52	UniRef90_A0A5M9I3H9	190.0	0	Branched-chain amino acid ABC transporter permease	N/A
eggNOG-mapper	UHGV-0071795_52	665950.HMPREF1025_02515	165.0	0	N/A	N/A
PHROG	UHGV-0071795_53	phrog_18218	129.5	1.2e-38	N/A	unknown function
UniRef90	UHGV-0071795_53	UniRef90_A0A373SUI3	179.0	0	Ribonuclease	N/A
eggNOG-mapper	UHGV-0071795_53	658655.HMPREF0988_02546	155.0	0	N/A	N/A
structural_annotation	UHGV-0071795_53	PF06946	N/A	N/A	N/A	N/A
PHROG	UHGV-0071795_54	phrog_7854	137.7	0	endolysin	lysis
UniRef90	UHGV-0071795_54	UniRef90_A0A373SW30	739.0	0	MurNAc-LAA domain-containing protein	N/A
eggNOG-mapper	UHGV-0071795_54	411462.DORLON_00764	229.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-0071795_54	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
Pfam	UHGV-0071795_54	PF19127	N/A	N/A	Choline-binding repeat	Choline_bind_3
COG	UHGV-0071795_54	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0071795_54	PF01520,TIGR02883,COG0860,COG5263	N/A	N/A	N/A	N/A
KOfam	UHGV-0071795_55	K06334	195.5	0	cotJC; spore coat protein JC	N/A
PHROG	UHGV-0071795_55	phrog_7573	162.7	0	N/A	unknown function
UniRef90	UHGV-0071795_55	UniRef90_A0A373N7L9	271.0	0	Manganese catalase family protein	N/A
eggNOG-mapper	UHGV-0071795_55	411460.RUMTOR_00841	262.0	0	N/A	N/A
Pfam	UHGV-0071795_55	PF05067	N/A	N/A	Manganese containing catalase	Mn_catalase
COG	UHGV-0071795_55	COG3546	N/A	N/A	Mn-containing catalase (includes spore coat protein CotJC)	N/A
structural_annotation	UHGV-0071795_55	PF02185,MF_01506,TIGR04535,COG3546	N/A	N/A	N/A	N/A