UHGV-0075110 (vOTU-081499)

Viral Genome: UHGV-0075110

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0075110
vOTU ID	vOTU-081499
Representative Genome?	Yes
Source	GPD
Original genome ID	uvig_124328
Associated BioSample	SAMEA2580200
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	92.17 (High-quality)
Trimmed provirus	No
CheckV viral markers	20
CheckV host markers	1
Recoded stop codon	No

Viral Content
geNomad score	0.9735
Virus hallmark genes (geNomad)	9
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	9.88
Jumbo phage	No

Genome content
Genome length (bp)	32,961
GC content	44.67%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	57
CDS density	89%
Average CDS length (bps)	515.95
Total tRNA genes	1
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 92.17)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-0075110_1	UniRef90_A0A1G4FQI1	208.0	0	Putative N-acetyltransferase YvbK	N/A
eggNOG-mapper	UHGV-0075110_1	428125.CLOLEP_00117	306.0	0	Acetyltransferase (GNAT) domain	N/A
Pfam	UHGV-0075110_1	PF13508	N/A	N/A	Acetyltransferase (GNAT) domain	Acetyltransf_7
COG	UHGV-0075110_1	COG0454	N/A	N/A	N-acetyltransferase, GNAT superfamily (includes histone acetyltransferase HPA2)	N/A
structural_annotation	UHGV-0075110_1	PF12568,MF_02210,NF007025,COG0456	N/A	N/A	N/A	N/A
KOfam	UHGV-0075110_2	K01880	434.1	0	GARS, glyS1; glycyl-tRNA synthetase [EC:6.1.1.14]	N/A
UniRef90	UHGV-0075110_2	UniRef90_A0A855A6C6	913.0	0	Glycine--tRNA ligase	N/A
eggNOG-mapper	UHGV-0075110_2	428125.CLOLEP_00119	897.0	0	Catalyzes the attachment of glycine to tRNA(Gly)	N/A
Pfam	UHGV-0075110_2	PF03129	N/A	N/A	Anticodon binding domain	HGTP_anticodon
NCBIFam	UHGV-0075110_2	NF003211.1	N/A	N/A	glycine--tRNA ligase	N/A
COG	UHGV-0075110_2	COG0423	N/A	N/A	Glycyl-tRNA synthetase, class II	N/A
HAMAP	UHGV-0075110_2	MF_00253_B	N/A	N/A	Glycine--tRNA ligase [glyQS]	N/A
KOfam	UHGV-0075110_3	K14059	207.0	0	int; integrase	N/A
PHROG	UHGV-0075110_3	phrog_1	190.3	0	integrase	integration and excision
UniRef90	UHGV-0075110_3	UniRef90_A0A1C6FNS1	792.0	0	Integrase	N/A
eggNOG-mapper	UHGV-0075110_3	428125.CLOLEP_01837	132.0	8.39e-32	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0075110_3	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0075110_3	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-0075110_3	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
PHROG	UHGV-0075110_4	phrog_7115	151.9	1.4013e-45	N/A	unknown function
UniRef90	UHGV-0075110_4	UniRef90_R6N893	246.0	0	N/A	N/A
eggNOG-mapper	UHGV-0075110_4	1410668.JNKC01000008_gene2722	196.0	0	Bacterial PH domain	N/A
Pfam	UHGV-0075110_4	PF08000	N/A	N/A	Bacterial PH domain	bPH_1
structural_annotation	UHGV-0075110_4	PF08000,MF_00437	N/A	N/A	N/A	N/A
PHROG	UHGV-0075110_6	phrog_87	77.1	1.9e-22	metallo-protease	other
UniRef90	UHGV-0075110_6	UniRef90_A7VVX5	279.0	0	ImmA/IrrE family metallo-endopeptidase	N/A
eggNOG-mapper	UHGV-0075110_6	428125.CLOLEP_02739	279.0	0	N/A	N/A
Pfam	UHGV-0075110_6	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
COG	UHGV-0075110_6	COG2856	N/A	N/A	Zn-dependent peptidase ImmA, M78 family	N/A
structural_annotation	UHGV-0075110_6	PF06114,COG2856	N/A	N/A	N/A	N/A
PHROG	UHGV-0075110_7	phrog_8	62.4	1.1e-17	transcriptional regulator	transcription regulation
UniRef90	UHGV-0075110_7	UniRef90_A0A855A1Q3	232.0	0	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0075110_7	428125.CLOLEP_02738	226.0	0	SMART helix-turn-helix domain protein	N/A
Pfam	UHGV-0075110_7	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0075110_7	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0075110_7	PF12844,NF041951,COG1396	N/A	N/A	N/A	N/A
UniRef90	UHGV-0075110_8	UniRef90_UPI001D00CEEC	103.0	2.27e-27	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0075110_8	428125.CLOLEP_02737	142.0	9.80909e-44	N/A	N/A
structural_annotation	UHGV-0075110_8	TIGR03070	N/A	N/A	N/A	N/A
PHROG	UHGV-0075110_12	phrog_4392	48.4	0.00000000000015	N/A	unknown function
UniRef90	UHGV-0075110_12	UniRef90_UPI000E489044	106.0	2.49e-27	membrane lipoprotein lipid attachment site-containing protein	N/A
PHROG	UHGV-0075110_20	phrog_2872	212.9	0	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0075110_20	UniRef90_A0A412AWF4	395.0	0	ATP-binding protein	N/A
eggNOG-mapper	UHGV-0075110_20	1345695.CLSA_c30180	248.0	0	AAA domain	N/A
Pfam	UHGV-0075110_20	PF13479	N/A	N/A	AAA domain	AAA_24
structural_annotation	UHGV-0075110_20	PF13479,MF_00350,TIGR01618,COG0468	N/A	N/A	N/A	N/A
PHROG	UHGV-0075110_22	phrog_18107	82.9	4.8e-24	N/A	unknown function
eggNOG-mapper	UHGV-0075110_22	476272.RUMHYD_02831	176.0	0	N/A	N/A
structural_annotation	UHGV-0075110_22	PF05037	N/A	N/A	N/A	N/A
PHROG	UHGV-0075110_23	phrog_3490	125.1	4.8e-37	ERCC4-type nuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0075110_23	UniRef90_R6N0P8	362.0	0	ERCC4 domain-containing protein	N/A
eggNOG-mapper	UHGV-0075110_23	476272.RUMHYD_01740	209.0	0	ERCC4 domain	N/A
Pfam	UHGV-0075110_23	PF02732	N/A	N/A	ERCC4 domain	ERCC4
COG	UHGV-0075110_23	COG1948	N/A	N/A	ERCC4-type crossover junction endonuclease	N/A
structural_annotation	UHGV-0075110_23	PF02732,NF040956,COG1948	N/A	N/A	N/A	N/A
PHROG	UHGV-0075110_24	phrog_2514	97.7	1.3e-28	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0075110_24	UniRef90_A0A1M5ZHR8	108.0	3.69e-26	TF_AP-2 domain-containing protein	N/A
eggNOG-mapper	UHGV-0075110_24	1348583.ATLH01000031_gene1927	108.0	8.62e-27	DnaD domain protein	N/A
COG	UHGV-0075110_24	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0075110_24	PF10771,MF_01177,TIGR01714,COG5529	N/A	N/A	N/A	N/A
KOfam	UHGV-0075110_25	K17680	286.8	0	PEO1; twinkle protein [EC:5.6.2.3]	N/A
PHROG	UHGV-0075110_25	phrog_239	289.1	0	DNA primase/helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0075110_25	UniRef90_R6P3P1	1192.0	0	SF4 helicase domain-containing protein	N/A
eggNOG-mapper	UHGV-0075110_25	476272.RUMHYD_02834	548.0	0	N/A	N/A
Pfam	UHGV-0075110_25	PF06745	N/A	N/A	KaiC	ATPase
COG	UHGV-0075110_25	COG0305	N/A	N/A	Replicative DNA helicase	N/A
structural_annotation	UHGV-0075110_25	PF03796,PF19898,MF_04154,TIGR03877,TIGR01391,COG0467,COG0358	N/A	N/A	N/A	N/A
PHROG	UHGV-0075110_28	phrog_757	97.3	9.6e-30	DNA methyltransferase	other
UniRef90	UHGV-0075110_28	UniRef90_A0A6M3L5L0	206.0	0	Putative methyltransferase	N/A
eggNOG-mapper	UHGV-0075110_28	1226322.HMPREF1545_03521	144.0	6.67999e-41	C-5 cytosine-specific DNA methylase	N/A
structural_annotation	UHGV-0075110_28	PF00145,TIGR00675,COG0270	N/A	N/A	N/A	N/A
PHROG	UHGV-0075110_29	phrog_2245	95.1	7.5e-28	nucleoside triphosphate pyrophosphohydrolase	other
UniRef90	UHGV-0075110_29	UniRef90_A0A4U9RLZ8	85.5	7.24e-20	N/A	N/A
eggNOG-mapper	UHGV-0075110_29	428125.CLOLEP_01814	169.0	0	COG NOG14118 non supervised orthologous group	N/A
structural_annotation	UHGV-0075110_29	PF12643,MF_01020,TIGR03188	N/A	N/A	N/A	N/A
UniRef90	UHGV-0075110_33	UniRef90_UPI001C3A10B1	67.0	0.00000000000709	Zinc ribbon domain-containing protein	N/A
eggNOG-mapper	UHGV-0075110_33	742738.HMPREF9460_04055	65.5	0.00000000000305	N/A	N/A
PHROG	UHGV-0075110_35	phrog_25732	45.5	0.0000000000011	N/A	unknown function
PHROG	UHGV-0075110_38	phrog_36	78.0	1.6e-22	transcriptional regulator	transcription regulation
UniRef90	UHGV-0075110_38	UniRef90_A0A4Z0XVP8	102.0	2.9e-25	RNA polymerase sigma factor SigO	N/A
eggNOG-mapper	UHGV-0075110_38	883112.HMPREF9707_01621	75.5	0.00000000000000147	N/A	N/A
COG	UHGV-0075110_38	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-0075110_38	PF07374,MF_00674,NF008895,COG1191	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0075110_39	PF09274,NF041284,COG4877	N/A	N/A	N/A	N/A
PHROG	UHGV-0075110_43	phrog_361	70.4	3e-20	terminase small subunit	head and packaging
UniRef90	UHGV-0075110_43	UniRef90_A0A1C6H6I9	241.0	0	Phage terminase, small subunit	N/A
Pfam	UHGV-0075110_43	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
COG	UHGV-0075110_43	COG3747	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0075110_43	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
PHROG	UHGV-0075110_44	phrog_9	296.1	0	terminase large subunit	head and packaging
UniRef90	UHGV-0075110_44	UniRef90_A0A0D8IV16	1088.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0075110_44	1226322.HMPREF1545_00113	892.0	0	Phage Terminase	N/A
Pfam	UHGV-0075110_44	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0075110_44	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0075110_44	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0075110_44	PF20441,PF03354,MF_04013,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0075110_45	phrog_12	176.5	0	portal protein	head and packaging
UniRef90	UHGV-0075110_45	UniRef90_A0A1C6H763	807.0	0	Phage portal protein, HK97 family	N/A
eggNOG-mapper	UHGV-0075110_45	1226322.HMPREF1545_00114	561.0	0	Phage portal protein, HK97 family	N/A
Pfam	UHGV-0075110_45	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-0075110_45	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-0075110_45	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0075110_45	PF04860,MF_04120,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-0075110_46	K06904	150.0	2.10195e-44	N/A	N/A
PHROG	UHGV-0075110_46	phrog_80	173.0	0	head maturation protease	head and packaging
UniRef90	UHGV-0075110_46	UniRef90_A0A1C6H687	394.0	0	Phage prohead protease, HK97 family	N/A
eggNOG-mapper	UHGV-0075110_46	1226322.HMPREF1545_00115	250.0	0	Phage prohead protease, HK97 family	N/A
Pfam	UHGV-0075110_46	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
NCBIFam	UHGV-0075110_46	TIGR01543.1	N/A	N/A	HK97 family phage prohead protease	N/A
COG	UHGV-0075110_46	COG3740	N/A	N/A	Phage head maturation protease	N/A
structural_annotation	UHGV-0075110_46	PF04586,TIGR01543,COG3740	N/A	N/A	N/A	N/A
PHROG	UHGV-0075110_47	phrog_10	210.1	0	major head protein	head and packaging
UniRef90	UHGV-0075110_47	UniRef90_A0A1C6H720	998.0	0	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
eggNOG-mapper	UHGV-0075110_47	1226322.HMPREF1545_00116	662.0	0	phage major capsid protein, HK97 family	N/A
Pfam	UHGV-0075110_47	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
Pfam	UHGV-0075110_47	PF12733	N/A	N/A	Cadherin-like beta sandwich domain	Cadherin-like
NCBIFam	UHGV-0075110_47	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0075110_47	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0075110_47	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0075110_48	phrog_2550	89.8	1.5e-26	N/A	unknown function
UniRef90	UHGV-0075110_48	UniRef90_R5V091	74.3	0.00000000000000191	Phage related protein	N/A
eggNOG-mapper	UHGV-0075110_48	1226322.HMPREF1545_00117	123.0	1.09e-35	N/A	N/A
structural_annotation	UHGV-0075110_48	PF05135,TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-0075110_49	phrog_1951	93.9	1.1e-27	head-tail adaptor	connector
UniRef90	UHGV-0075110_49	UniRef90_A0A2V2GSS5	128.0	2.17e-36	Phage head-tail adapter protein	N/A
eggNOG-mapper	UHGV-0075110_49	411471.SUBVAR_05854	85.1	2.75e-20	N/A	N/A
structural_annotation	UHGV-0075110_49	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0075110_50	phrog_5	59.2	1.1e-16	tail completion or Neck1 protein	connector
UniRef90	UHGV-0075110_50	UniRef90_A0A8J6PH82	189.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0075110_50	411471.SUBVAR_05855	128.0	2e-36	N/A	N/A
Pfam	UHGV-0075110_50	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-0075110_50	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-0075110_51	phrog_78	52.2	0.000000000000012	tail terminator	connector
UniRef90	UHGV-0075110_51	UniRef90_U2SBX3	105.0	2e-27	HTH merR-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0075110_51	411471.SUBVAR_05856	120.0	2.76e-34	N/A	N/A
structural_annotation	UHGV-0075110_51	PF20765	N/A	N/A	N/A	N/A
PHROG	UHGV-0075110_52	phrog_88	171.7	0	major tail protein	tail
UniRef90	UHGV-0075110_52	UniRef90_A0A1C6H6F0	360.0	0	Phage major tail protein, phi13 family	N/A
eggNOG-mapper	UHGV-0075110_52	1226322.HMPREF1545_00121	190.0	0	phage major tail protein, phi13 family	N/A
NCBIFam	UHGV-0075110_52	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-0075110_52	PF06488,TIGR01603,COG3157	N/A	N/A	N/A	N/A
PHROG	UHGV-0075110_53	phrog_709	119.9	1.4e-35	N/A	unknown function
eggNOG-mapper	UHGV-0075110_53	411471.SUBVAR_05858	139.0	6.67999e-41	N/A	N/A
structural_annotation	UHGV-0075110_53	PF11836	N/A	N/A	N/A	N/A
PHROG	UHGV-0075110_54	phrog_3033	49.4	0.000000000000072	N/A	unknown function
eggNOG-mapper	UHGV-0075110_54	1280671.AUJH01000012_gene3142	52.4	0.0000000175	N/A	N/A
PHROG	UHGV-0075110_55	phrog_23464	259.6	0	N/A	unknown function
UniRef90	UHGV-0075110_55	UniRef90_A0A1C6H5M9	1097.0	0	Phage-related minor tail protein	N/A
eggNOG-mapper	UHGV-0075110_55	33035.JPJF01000023_gene3232	290.0	0	phage tail tape measure protein	N/A
COG	UHGV-0075110_55	COG5412	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0075110_55	PF20155,TIGR01760,COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-0075110_56	phrog_33	81.5	1.7e-23	distal tail protein Dit	tail
UniRef90	UHGV-0075110_56	UniRef90_A0A1C6H6D2	482.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0075110_56	1160721.RBI_I01575	163.0	0	Phage tail protein	N/A
COG	UHGV-0075110_56	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0075110_56	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0075110_57	phrog_1067	414.0	0	minor head protein	head and packaging
UniRef90	UHGV-0075110_57	UniRef90_A0A1C6H6B4	973.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0075110_57	1123263.AUKY01000068_gene489	431.0	0	Phage minor structural protein	N/A
Pfam	UHGV-0075110_57	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-0075110_57	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0075110_57	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0075110_57	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A