UHGV-0075677 (vOTU-014714)

Viral Genome: UHGV-0075677

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0075677
vOTU ID	vOTU-014714
Representative Genome?	Yes
Source	GPD
Original genome ID	uvig_136008
Associated BioSample	SAMEA2737719
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	98.38 (High-quality)
Trimmed provirus	No
CheckV viral markers	12
CheckV host markers	3
Recoded stop codon	No

Viral Content
geNomad score	0.9757
Virus hallmark genes (geNomad)	10
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	37.7
Jumbo phage	No

Genome content
Genome length (bp)	39,016
GC content	42.91%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	48
CDS density	95%
Average CDS length (bps)	771.44
Total tRNA genes	1
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 98.38)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
Pfam	UHGV-0075677_1	PF01022	N/A	N/A	Bacterial regulatory protein, arsR family	HTH_5
PHROG	UHGV-0075677_2	phrog_15198	42.8	0.0000000000086	N/A	unknown function
UniRef90	UHGV-0075677_2	UniRef90_A0A3R6QEJ7	273.0	0	N/A	N/A
eggNOG-mapper	UHGV-0075677_2	1235799.C818_04211	97.1	5.49e-23	N/A	N/A
Pfam	UHGV-0075677_2	PF04448	N/A	N/A	N/A	DUF551
PHROG	UHGV-0075677_6	phrog_36	75.4	9.7e-22	transcriptional regulator	transcription regulation
UniRef90	UHGV-0075677_6	UniRef90_UPI001D089637	176.0	0	N/A	N/A
eggNOG-mapper	UHGV-0075677_6	1304866.K413DRAFT_3028	170.0	0	N/A	N/A
structural_annotation	UHGV-0075677_6	PF04545	N/A	N/A	N/A	N/A
PHROG	UHGV-0075677_8	phrog_509	275.5	0	terminase small subunit	head and packaging
UniRef90	UHGV-0075677_8	UniRef90_R5J299	448.0	0	Phage terminase small subunit	N/A
eggNOG-mapper	UHGV-0075677_8	552396.HMPREF0863_04210	278.0	0	DNA packaging	N/A
Pfam	UHGV-0075677_8	PF10668	N/A	N/A	Phage terminase small subunit	Phage_terminase
NCBIFam	UHGV-0075677_8	NF040601.1	N/A	N/A	phage terminase small subunit	N/A
COG	UHGV-0075677_8	COG5484	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0075677_8	PF06056,NF040601,COG5484	N/A	N/A	N/A	N/A
KOfam	UHGV-0075677_9	K06909	98.4	1e-28	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0075677_9	phrog_2	103.2	4.9e-30	terminase large subunit	head and packaging
UniRef90	UHGV-0075677_9	UniRef90_R5ILS3	843.0	0	Phage terminase large subunit PBSX family	N/A
eggNOG-mapper	UHGV-0075677_9	1449050.JNLE01000003_gene3895	600.0	0	phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-0075677_9	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-0075677_9	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0075677_9	PF04466,PF20441,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0075677_10	phrog_533	410.7	0	portal protein	head and packaging
UniRef90	UHGV-0075677_10	UniRef90_A0A396QLL8	806.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0075677_10	411902.CLOBOL_00138	749.0	0	N/A	N/A
Pfam	UHGV-0075677_10	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0075677_10	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
UniRef90	UHGV-0075677_11	UniRef90_A0A496N3Q2	47.8	0.00000529	Minor capsid protein (Fragment)	N/A
eggNOG-mapper	UHGV-0075677_11	411902.CLOBOL_00137	54.3	0.0000000447	N/A	N/A
COG	UHGV-0075677_11	COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-0075677_12	phrog_581	277.2	0	minor head protein	head and packaging
UniRef90	UHGV-0075677_12	UniRef90_UPI001D0859FA	714.0	0	phage minor capsid protein	N/A
eggNOG-mapper	UHGV-0075677_12	411902.CLOBOL_00137	523.0	0	N/A	N/A
Pfam	UHGV-0075677_12	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0075677_12	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0075677_12	PF06152,PF12636	N/A	N/A	N/A	N/A
PHROG	UHGV-0075677_13	phrog_27009	123.0	9.9e-37	N/A	unknown function
PHROG	UHGV-0075677_15	phrog_355	59.2	6.6e-17	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0075677_15	UniRef90_A0A396KGT7	215.0	0	N/A	N/A
eggNOG-mapper	UHGV-0075677_15	97138.C820_00250	130.0	3.38e-38	N/A	N/A
Pfam	UHGV-0075677_15	PF14359	N/A	N/A	N/A	DUF4406
structural_annotation	UHGV-0075677_15	PF14359,COG3613	N/A	N/A	N/A	N/A
PHROG	UHGV-0075677_16	phrog_194	90.3	2.8e-26	head scaffolding protein	head and packaging
UniRef90	UHGV-0075677_16	UniRef90_UPI001D07762B	273.0	0	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-0075677_16	411902.CLOBOL_00135	247.0	0	COG NOG36366 non supervised orthologous group	N/A
Pfam	UHGV-0075677_16	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-0075677_16	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0075677_17	phrog_10	183.8	0	major head protein	head and packaging
UniRef90	UHGV-0075677_17	UniRef90_A0A3R6X865	706.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-0075677_17	411902.CLOBOL_00134	696.0	0	Phage capsid family	N/A
Pfam	UHGV-0075677_17	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0075677_17	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0075677_17	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0075677_17	PF05065,PF13620,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0075677_18	phrog_541	97.9	8.3e-29	head-tail adaptor	connector
eggNOG-mapper	UHGV-0075677_18	1304866.K413DRAFT_3039	126.0	7.65e-36	N/A	N/A
PHROG	UHGV-0075677_19	phrog_3366	86.6	1.9e-25	N/A	unknown function
eggNOG-mapper	UHGV-0075677_19	411902.CLOBOL_00132	198.0	0	N/A	N/A
Pfam	UHGV-0075677_19	PF20536	N/A	N/A	N/A	DUF6751
structural_annotation	UHGV-0075677_19	PF20536,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0075677_20	phrog_556	90.6	6.1e-27	minor head protein	head and packaging
UniRef90	UHGV-0075677_20	UniRef90_UPI0015948E32	218.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0075677_20	411902.CLOBOL_00131	221.0	0	Minor capsid protein	N/A
Pfam	UHGV-0075677_20	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0075677_20	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0075677_21	phrog_3266	131.1	4.8e-39	tail completion	connector
eggNOG-mapper	UHGV-0075677_21	411902.CLOBOL_00130	213.0	0	N/A	N/A
structural_annotation	UHGV-0075677_21	PF20765	N/A	N/A	N/A	N/A
PHROG	UHGV-0075677_22	phrog_3099	162.9	0	N/A	unknown function
eggNOG-mapper	UHGV-0075677_22	411902.CLOBOL_00129	259.0	0	N/A	N/A
structural_annotation	UHGV-0075677_22	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0075677_23	phrog_11299	179.9	0	N/A	unknown function
eggNOG-mapper	UHGV-0075677_23	1298920.KI911353_gene2067	109.0	2.08e-28	N/A	N/A
structural_annotation	UHGV-0075677_23	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-0075677_24	phrog_706	135.4	3.8e-40	N/A	unknown function
UniRef90	UHGV-0075677_24	UniRef90_UPI0011DC8B0C	274.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-0075677_24	411902.CLOBOL_00127	244.0	0	N/A	N/A
Pfam	UHGV-0075677_24	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0075677_24	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0075677_25	phrog_1535	329.0	0	tail length tape measure protein	tail
eggNOG-mapper	UHGV-0075677_25	33035.JPJF01000093_gene2243	247.0	0	phage tail tape measure protein	N/A
COG	UHGV-0075677_25	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-0075677_25	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0075677_26	phrog_1194	77.5	1.6e-22	N/A	unknown function
eggNOG-mapper	UHGV-0075677_26	1304866.K413DRAFT_3047	186.0	0	N/A	N/A
Pfam	UHGV-0075677_26	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-0075677_26	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0075677_27	phrog_18190	887.7	0	N/A	unknown function
UniRef90	UHGV-0075677_27	UniRef90_R5ILV2	1342.0	0	Peptidase S74 domain-containing protein	N/A
eggNOG-mapper	UHGV-0075677_27	1298920.KI911353_gene2679	341.0	0	N/A	N/A
Pfam	UHGV-0075677_27	PF13884	N/A	N/A	Chaperone of endosialidase	Peptidase_S74
structural_annotation	UHGV-0075677_27	PF14594,NF033848,COG3501	N/A	N/A	N/A	N/A
KOfam	UHGV-0075677_29	K13276	69.9	1.3e-20	bpr; bacillopeptidase F [EC:3.4.21.-]	N/A
PHROG	UHGV-0075677_29	phrog_11157	296.4	0	N/A	unknown function
UniRef90	UHGV-0075677_29	UniRef90_A0A417ABU7	460.0	0	Big_13 domain-containing protein	N/A
eggNOG-mapper	UHGV-0075677_29	1256908.HMPREF0373_00674	361.0	0	N/A	N/A
Pfam	UHGV-0075677_29	PF19077	N/A	N/A	Bacterial Ig-like domain	Big_13
Pfam	UHGV-0075677_29	PF09136	N/A	N/A	Glucodextranase, domain B	Glucodextran_B
COG	UHGV-0075677_29	COG3292	N/A	N/A	Periplasmic ligand-binding sensor domain	N/A
structural_annotation	UHGV-0075677_29	PF09136,PF13205,PF13754,MF_04116,NF032891,COG2372,COG5456	N/A	N/A	N/A	N/A
PHROG	UHGV-0075677_30	phrog_32322	216.0	0	N/A	unknown function
UniRef90	UHGV-0075677_30	UniRef90_R5ILQ9	228.0	0	Ig-like_bact domain-containing protein	N/A
eggNOG-mapper	UHGV-0075677_30	1280698.AUJS01000007_gene1055	84.3	9.9e-20	N/A	N/A
Pfam	UHGV-0075677_30	PF13754	N/A	N/A	N/A	Big_3_4
structural_annotation	UHGV-0075677_30	PF13754	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0075677_31	742765.HMPREF9457_03366	62.4	0.0000000000118	N/A	N/A
structural_annotation	UHGV-0075677_31	PF07703,NF038114,COG5501	N/A	N/A	N/A	N/A
PHROG	UHGV-0075677_33	phrog_2012	50.7	0.000000000000029	minor tail protein	tail
PHROG	UHGV-0075677_34	phrog_918	128.6	1.5e-38	N/A	unknown function
UniRef90	UHGV-0075677_34	UniRef90_UPI00096A904F	142.0	1.02015e-42	N/A	N/A
eggNOG-mapper	UHGV-0075677_34	1499683.CCFF01000014_gene3910	133.0	7.84e-40	N/A	N/A
Pfam	UHGV-0075677_34	PF19791	N/A	N/A	N/A	DUF6275
structural_annotation	UHGV-0075677_34	PF19791	N/A	N/A	N/A	N/A
PHROG	UHGV-0075677_35	phrog_355	59.9	4.1e-17	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0075677_35	UniRef90_A0A396KGT7	218.0	0	N/A	N/A
eggNOG-mapper	UHGV-0075677_35	97138.C820_00250	128.0	2.77e-37	N/A	N/A
Pfam	UHGV-0075677_35	PF14359	N/A	N/A	N/A	DUF4406
structural_annotation	UHGV-0075677_35	PF14359,COG3613	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0075677_36	742740.HMPREF9474_04291	98.2	1.66e-24	N/A	N/A
NCBIFam	UHGV-0075677_37	NF040910.1	N/A	N/A	CD1375 family protein	N/A
structural_annotation	UHGV-0075677_37	NF040910	N/A	N/A	N/A	N/A
PHROG	UHGV-0075677_38	phrog_199	67.5	1.8e-19	holin	lysis
UniRef90	UHGV-0075677_38	UniRef90_A0A417U634	284.0	0	Holin	N/A
eggNOG-mapper	UHGV-0075677_38	1235793.C809_01935	172.0	0	Bacteriophage holin family	N/A
Pfam	UHGV-0075677_38	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-0075677_38	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
COG	UHGV-0075677_38	COG4824	N/A	N/A	Phage-related holin (Lysis protein)	N/A
structural_annotation	UHGV-0075677_38	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
KOfam	UHGV-0075677_39	K01185	138.4	8.10007e-41	E3.2.1.17; lysozyme [EC:3.2.1.17]	N/A
PHROG	UHGV-0075677_39	phrog_7	172.4	0	endolysin	lysis
UniRef90	UHGV-0075677_39	UniRef90_UPI00115BF0FD	231.0	0	glycoside hydrolase family protein	N/A
eggNOG-mapper	UHGV-0075677_39	397291.C804_01109	147.0	5.8e-39	Phage lysozyme	N/A
Pfam	UHGV-0075677_39	PF00959	N/A	N/A	Phage lysozyme	Phage_lysozyme
Pfam	UHGV-0075677_39	PF19127	N/A	N/A	Choline-binding repeat	Choline_bind_3
COG	UHGV-0075677_39	COG3584	N/A	N/A	3D (Asp-Asp-Asp) domain, usually in lytic transglycosylases	N/A
HAMAP	UHGV-0075677_39	MF_04110	N/A	N/A	Endolysin	N/A
structural_annotation	UHGV-0075677_39	PF19127,MF_04110,TIGR04035,COG3772	N/A	N/A	N/A	N/A
PHROG	UHGV-0075677_40	phrog_12105	104.6	7.4e-31	N/A	unknown function
eggNOG-mapper	UHGV-0075677_40	1226322.HMPREF1545_03850	60.1	0.000000000752	N/A	N/A
PHROG	UHGV-0075677_41	phrog_511	223.9	0	internal virion protein	head and packaging
eggNOG-mapper	UHGV-0075677_41	1321782.HMPREF1986_00351	446.0	0	N/A	N/A
structural_annotation	UHGV-0075677_41	PF11134,TIGR03300,NF038126,COG1520	N/A	N/A	N/A	N/A
UniRef90	UHGV-0075677_42	UniRef90_A0A3R6THL3	609.0	0	Tail fiber domain-containing protein	N/A
Pfam	UHGV-0075677_42	PF13884	N/A	N/A	Chaperone of endosialidase	Peptidase_S74
structural_annotation	UHGV-0075677_42	NF041249	N/A	N/A	N/A	N/A
PHROG	UHGV-0075677_43	phrog_5668	69.2	2.4e-20	tail fiber protein	tail
UniRef90	UHGV-0075677_43	UniRef90_A0A396K685	592.0	0	Tail fiber domain-containing protein	N/A
Pfam	UHGV-0075677_43	PF13884	N/A	N/A	Chaperone of endosialidase	Peptidase_S74
structural_annotation	UHGV-0075677_43	NF041249	N/A	N/A	N/A	N/A
PHROG	UHGV-0075677_45	phrog_2307	62.7	8e-18	L-alanyl-D-glutamate peptidase	other
UniRef90	UHGV-0075677_45	UniRef90_A0A396K636	736.0	0	N/A	N/A
eggNOG-mapper	UHGV-0075677_45	1410650.JHWL01000003_gene2815	110.0	8.89e-24	N/A	N/A
Pfam	UHGV-0075677_45	PF12200	N/A	N/A	N/A	DUF3597
PHROG	UHGV-0075677_46	phrog_22978	559.7	0	N/A	unknown function
UniRef90	UHGV-0075677_46	UniRef90_A0A396KH15	4871.0	0	PBECR3 domain-containing protein	N/A
eggNOG-mapper	UHGV-0075677_46	1321782.HMPREF1986_00356	418.0	0	N/A	N/A
Pfam	UHGV-0075677_46	PF18812	N/A	N/A	phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease3	PBECR3
KOfam	UHGV-0075677_48	K11527	236.3	0	K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]	N/A
PHROG	UHGV-0075677_48	phrog_20458	184.4	0	N/A	unknown function
UniRef90	UHGV-0075677_48	UniRef90_A0A355PQU7	247.0	0	Stage 0 sporulation protein A homolog (Fragment)	N/A
eggNOG-mapper	UHGV-0075677_48	411459.RUMOBE_00333	356.0	0	ATPase histidine kinase DNA gyrase B HSP90 domain protein	N/A
Pfam	UHGV-0075677_48	PF00512	N/A	N/A	His Kinase A (phospho-acceptor) domain	HisKA
Pfam	UHGV-0075677_48	PF02518	N/A	N/A	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	HATPase_c
COG	UHGV-0075677_48	COG0642	N/A	N/A	Signal transduction histidine kinase	N/A