UHGV-0076652 (vOTU-022676)

Viral Genome: UHGV-0076652

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0076652
vOTU ID	vOTU-022676
Representative Genome?	Yes
Source	GPD
Original genome ID	uvig_130779
Associated BioSample	SAMEA2737781
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	87.21 (Medium-quality)
Trimmed provirus	Yes
CheckV viral markers	17
CheckV host markers	3
Recoded stop codon	No

Viral Content
geNomad score	0.9732
Virus hallmark genes (geNomad)	9
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	28.88
Jumbo phage	No

Genome content
Genome length (bp)	30,795
GC content	51.45%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	45
CDS density	94%
Average CDS length (bps)	643.40
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 87.21)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0076652_6	K23779	57.4	3.7e-16	sutR; XRE family transcriptional regulator, regulator of sulfur utilization	N/A
PHROG	UHGV-0076652_6	phrog_5823	46.5	0.00000000000057	transcriptional regulator	transcription regulation
UniRef90	UHGV-0076652_6	UniRef90_U2K8A4	140.0	3.1305e-42	DNA-binding helix-turn-helix protein	N/A
eggNOG-mapper	UHGV-0076652_6	596154.Alide2_1081	47.0	0.00000713	Helix-turn-helix domain	N/A
PADLOC	UHGV-0076652_6	retron_type_VI_hth_cluster2_1	49.9	0.000000000000097	N/A	Retron
Pfam	UHGV-0076652_6	PF13560	N/A	N/A	Helix-turn-helix domain	HTH_31
COG	UHGV-0076652_6	COG3620	N/A	N/A	Predicted transcriptional regulator, contains an XRE-type HTH domain (archaeal members contain CBS pair)	N/A
PHROG	UHGV-0076652_9	phrog_310	367.7	0	transposase	integration and excision
UniRef90	UHGV-0076652_9	UniRef90_U2LZ18	1177.0	0	Integrase catalytic domain-containing protein	N/A
eggNOG-mapper	UHGV-0076652_9	411473.RUMCAL_01908	1177.0	0	Mu transposase, C-terminal	N/A
PADLOC	UHGV-0076652_9	TnsB_0_V-K	62.7	4.1e-18	TnsB_0_V-K	CRISPR-CAS
Pfam	UHGV-0076652_9	PF09039	N/A	N/A	Mu DNA binding, I gamma subdomain	HTH_Tnp_Mu_2
Pfam	UHGV-0076652_9	PF00665	N/A	N/A	Integrase core domain	rve
Pfam	UHGV-0076652_9	PF09299	N/A	N/A	Mu transposase, C-terminal	Mu-transpos_C
COG	UHGV-0076652_9	COG2801	N/A	N/A	Transposase InsO and inactivated derivatives	N/A
structural_annotation	UHGV-0076652_9	PF02914,PF09039,PF09299,PF21531,NF033594,TIGR01764,COG3316,COG3311	N/A	N/A	N/A	N/A
KOfam	UHGV-0076652_10	K07132	65.2	1e-18	MuB; ATP-dependent target DNA activator	N/A
PHROG	UHGV-0076652_10	phrog_296	141.8	6.30024e-42	DNA transposition protein	integration and excision
UniRef90	UHGV-0076652_10	UniRef90_R7FFF2	574.0	0	AAA domain protein	N/A
eggNOG-mapper	UHGV-0076652_10	411473.RUMCAL_01909	574.0	0	AAA domain	N/A
Pfam	UHGV-0076652_10	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
Pfam	UHGV-0076652_10	PF13401	N/A	N/A	AAA domain	AAA_22
COG	UHGV-0076652_10	COG2842	N/A	N/A	Bacteriophage DNA transposition protein, AAA+ family ATPase	N/A
structural_annotation	UHGV-0076652_10	PF13401,MF_01407,TIGR03015,COG2842	N/A	N/A	N/A	N/A
PHROG	UHGV-0076652_11	phrog_4292	90.1	1.1e-26	N/A	unknown function
UniRef90	UHGV-0076652_11	UniRef90_A0A7G3VS96	53.1	0.0000000397	Putative NHN endonuclease	N/A
eggNOG-mapper	UHGV-0076652_11	411473.RUMCAL_01910	116.0	7.18e-34	N/A	N/A
PHROG	UHGV-0076652_12	phrog_6244	86.0	5.5e-25	N/A	unknown function
eggNOG-mapper	UHGV-0076652_12	1232453.BAIF02000002_gene1275	82.0	3.53e-19	YqaJ viral recombinase family	N/A
COG	UHGV-0076652_12	COG5377	N/A	N/A	Phage-related protein, predicted endonuclease	N/A
PHROG	UHGV-0076652_13	phrog_5671	135.0	3.5e-40	N/A	unknown function
eggNOG-mapper	UHGV-0076652_13	411473.RUMCAL_01912	243.0	0	N/A	N/A
PHROG	UHGV-0076652_14	phrog_270	77.6	2.7e-22	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0076652_14	411473.RUMCAL_01913	209.0	0	HNH endonuclease	N/A
COG	UHGV-0076652_14	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
KOfam	UHGV-0076652_15	K02315	117.7	1.3e-34	dnaC; DNA replication protein DnaC	N/A
PHROG	UHGV-0076652_15	phrog_50	135.5	4.39999e-40	DnaC-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0076652_15	UniRef90_U2KRN6	486.0	0	IstB_IS21 domain-containing protein	N/A
eggNOG-mapper	UHGV-0076652_15	411473.RUMCAL_01914	486.0	0	N/A	N/A
Pfam	UHGV-0076652_15	PF01695	N/A	N/A	IstB-like ATP binding protein	IstB_IS21
COG	UHGV-0076652_15	COG1484	N/A	N/A	DNA replication protein DnaC	N/A
structural_annotation	UHGV-0076652_15	PF01695,MF_01158,NF005378,COG1484	N/A	N/A	N/A	N/A
PHROG	UHGV-0076652_16	phrog_286	78.3	1.3e-22	N/A	unknown function
UniRef90	UHGV-0076652_16	UniRef90_J6H7H7	107.0	1.84e-26	PF06252 family protein	N/A
eggNOG-mapper	UHGV-0076652_16	411473.RUMCAL_01915	296.0	0	N/A	N/A
Pfam	UHGV-0076652_16	PF06252	N/A	N/A	Bacteriophage Mu, GemA protein	GemA
structural_annotation	UHGV-0076652_16	PF06252	N/A	N/A	N/A	N/A
PHROG	UHGV-0076652_17	phrog_532	66.9	3.6e-19	late transcriptional activator	transcription regulation
UniRef90	UHGV-0076652_17	UniRef90_U2KR36	194.0	0	Mor transcription activator family protein	N/A
eggNOG-mapper	UHGV-0076652_17	411473.RUMCAL_01916	194.0	0	Mor transcription activator	N/A
Pfam	UHGV-0076652_17	PF08765	N/A	N/A	Mor transcription activator family	Mor
COG	UHGV-0076652_17	COG5566	N/A	N/A	Transcriptional regulator, middle operon regulator (Mor) family	N/A
structural_annotation	UHGV-0076652_17	PF08765,NF040785,COG5566	N/A	N/A	N/A	N/A
PHROG	UHGV-0076652_18	phrog_462	63.2	2.6e-18	lipoprotein	other
eggNOG-mapper	UHGV-0076652_18	411473.RUMCAL_01917	193.0	0	N/A	N/A
PHROG	UHGV-0076652_19	phrog_25462	180.3	0	N/A	unknown function
UniRef90	UHGV-0076652_19	UniRef90_A0A3C0QMV8	142.0	6.85936e-42	Type VI secretion protein	N/A
eggNOG-mapper	UHGV-0076652_19	411473.RUMCAL_01918	197.0	0	N/A	N/A
structural_annotation	UHGV-0076652_19	PF01638,MF_01819,NF002926,COG1733	N/A	N/A	N/A	N/A
PHROG	UHGV-0076652_20	phrog_426	105.0	1e-30	terminase small subunit	head and packaging
UniRef90	UHGV-0076652_20	UniRef90_UPI001D05DC57	176.0	0	N/A	N/A
eggNOG-mapper	UHGV-0076652_20	411473.RUMCAL_01919	350.0	0	N/A	N/A
Pfam	UHGV-0076652_20	PF11985	N/A	N/A	Bacteriophage Mu, Gp27	Phage_Mu_Gp27
structural_annotation	UHGV-0076652_20	PF11985	N/A	N/A	N/A	N/A
KOfam	UHGV-0076652_21	K05785	52.1	0.000000000000011	rfaH; transcriptional antiterminator RfaH	N/A
PHROG	UHGV-0076652_21	phrog_6386	125.7	3e-37	transcription antiterminator	transcription regulation
UniRef90	UHGV-0076652_21	UniRef90_U2K8B7	330.0	0	Transcription termination/antitermination factor NusG	N/A
eggNOG-mapper	UHGV-0076652_21	411473.RUMCAL_01920	330.0	0	Transcription termination factor nusG	N/A
Pfam	UHGV-0076652_21	PF02357	N/A	N/A	Transcription termination factor nusG	NusG
COG	UHGV-0076652_21	COG0250	N/A	N/A	Transcription termination/antitermination protein NusG	N/A
structural_annotation	UHGV-0076652_21	PF02357,MF_00951,NF033641,COG0250	N/A	N/A	N/A	N/A
UniRef90	UHGV-0076652_22	UniRef90_W0U9H3	56.2	0.000000167	Phage terminase, small subunit	N/A
eggNOG-mapper	UHGV-0076652_22	411473.RUMCAL_01921	214.0	0	N/A	N/A
KOfam	UHGV-0076652_23	K06909	144.1	1.3004e-42	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0076652_23	phrog_10250	160.3	0	N/A	unknown function
UniRef90	UHGV-0076652_23	UniRef90_U2LZ34	863.0	0	Phage terminase, large subunit, PBSX family	N/A
eggNOG-mapper	UHGV-0076652_23	411473.RUMCAL_01923	863.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-0076652_23	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
NCBIFam	UHGV-0076652_23	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0076652_23	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0076652_23	PF03237,PF17289,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0076652_24	phrog_533	333.5	0	portal protein	head and packaging
UniRef90	UHGV-0076652_24	UniRef90_U2KRP5	852.0	0	Putative phage minor capsid protein	N/A
eggNOG-mapper	UHGV-0076652_24	411473.RUMCAL_01924	852.0	0	N/A	N/A
structural_annotation	UHGV-0076652_24	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0076652_25	phrog_581	321.8	0	minor head protein	head and packaging
UniRef90	UHGV-0076652_25	UniRef90_U2K8C2	1136.0	0	Phage minor capsid protein 2	N/A
eggNOG-mapper	UHGV-0076652_25	411473.RUMCAL_01925	1136.0	0	N/A	N/A
Pfam	UHGV-0076652_25	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0076652_25	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0076652_25	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-0076652_27	phrog_1048	100.2	3.4e-29	N/A	unknown function
UniRef90	UHGV-0076652_27	UniRef90_A0A3D5KWH4	150.0	1.4013e-45	N/A	N/A
eggNOG-mapper	UHGV-0076652_27	411473.RUMCAL_01927	173.0	0	N/A	N/A
Pfam	UHGV-0076652_27	PF11195	N/A	N/A	N/A	DUF2829
dbAPIS	UHGV-0076652_27	APIS029	N/A	N/A	Tad2 is a "sponge" that sequesters the immune signaling molecules produced by Thoeris TIR-domain proteins in response to phage.	N/A
structural_annotation	UHGV-0076652_27	PF11195	N/A	N/A	N/A	N/A
PHROG	UHGV-0076652_28	phrog_194	58.3	1.9e-16	head scaffolding protein	head and packaging
UniRef90	UHGV-0076652_28	UniRef90_R7FEY9	328.0	0	Phage minor structural protein GP20	N/A
eggNOG-mapper	UHGV-0076652_28	411473.RUMCAL_01929	328.0	0	Phage minor structural protein GP20	N/A
Pfam	UHGV-0076652_28	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-0076652_28	PF06810,MF_02110	N/A	N/A	N/A	N/A
PHROG	UHGV-0076652_29	phrog_267	93.0	3.8e-27	major head protein	head and packaging
UniRef90	UHGV-0076652_29	UniRef90_A0A4P8IA69	364.0	0	Phage capsid and scaffold	N/A
eggNOG-mapper	UHGV-0076652_29	411473.RUMCAL_01930	531.0	0	N/A	N/A
structural_annotation	UHGV-0076652_29	PF11651,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0076652_30	phrog_541	99.7	2.3e-29	head-tail adaptor	connector
eggNOG-mapper	UHGV-0076652_30	641112.ACOK01000073_gene2896	104.0	5.8e-27	N/A	N/A
PHROG	UHGV-0076652_31	phrog_3366	62.7	9.6e-19	N/A	unknown function
eggNOG-mapper	UHGV-0076652_31	411473.RUMCAL_01932	222.0	0	N/A	N/A
structural_annotation	UHGV-0076652_31	PF20536,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0076652_32	phrog_556	89.8	2.6e-26	minor head protein	head and packaging
UniRef90	UHGV-0076652_32	UniRef90_T3DSR7	77.8	3.16e-16	Minor capsid family protein	N/A
eggNOG-mapper	UHGV-0076652_32	1151292.QEW_4532	77.8	5.3e-17	Minor capsid protein	N/A
Pfam	UHGV-0076652_32	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0076652_32	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0076652_33	phrog_3266	168.1	0	tail completion	connector
UniRef90	UHGV-0076652_33	UniRef90_A0A355UZ60	168.0	0	Chloramphenicol resistance protein	N/A
eggNOG-mapper	UHGV-0076652_33	411473.RUMCAL_01934	303.0	0	N/A	N/A
structural_annotation	UHGV-0076652_33	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0076652_34	phrog_3099	181.8	0	N/A	unknown function
eggNOG-mapper	UHGV-0076652_34	411473.RUMCAL_01935	474.0	0	N/A	N/A
structural_annotation	UHGV-0076652_34	PF08813,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0076652_35	phrog_4450	101.0	1e-29	N/A	unknown function
UniRef90	UHGV-0076652_35	UniRef90_A0A355D9Y6	55.5	0.000000191	AP endonuclease	N/A
eggNOG-mapper	UHGV-0076652_35	641112.ACOK01000073_gene2902	93.2	1e-22	N/A	N/A
Pfam	UHGV-0076652_35	PF20378	N/A	N/A	N/A	DUF6673
structural_annotation	UHGV-0076652_35	PF20378	N/A	N/A	N/A	N/A
PHROG	UHGV-0076652_36	phrog_706	168.5	0	N/A	unknown function
UniRef90	UHGV-0076652_36	UniRef90_B0G3B6	145.0	8.35006e-41	Bacteriophage Gp15 protein	N/A
eggNOG-mapper	UHGV-0076652_36	411473.RUMCAL_01937	366.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0076652_36	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0076652_36	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0076652_37	phrog_1272	270.5	0	tail length tape measure protein	tail
UniRef90	UHGV-0076652_37	UniRef90_R7FII5	893.0	0	PhageMin_Tail domain-containing protein	N/A
eggNOG-mapper	UHGV-0076652_37	411473.RUMCAL_01938	895.0	0	tail tape measure protein, TP901	N/A
Pfam	UHGV-0076652_37	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
COG	UHGV-0076652_37	COG5280	N/A	N/A	Phage-related minor tail protein	N/A
structural_annotation	UHGV-0076652_37	PF10145,TIGR01760,COG5280	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0076652_39	PF14594,TIGR03361,COG3500	N/A	N/A	N/A	N/A
KOfam	UHGV-0076652_40	K16617	81.4	6.8e-24	COL13A; collagen type XIII alpha	N/A
PHROG	UHGV-0076652_40	phrog_25888	429.0	0	N/A	unknown function
UniRef90	UHGV-0076652_40	UniRef90_U2KR58	511.0	0	Collagen triple helix repeat protein	N/A
eggNOG-mapper	UHGV-0076652_40	411473.RUMCAL_01941	511.0	0	cell adhesion	N/A
Pfam	UHGV-0076652_40	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
COG	UHGV-0076652_40	COG3468	N/A	N/A	Autotransporter adhesin AidA	N/A
structural_annotation	UHGV-0076652_40	PF10651	N/A	N/A	N/A	N/A
PHROG	UHGV-0076652_41	phrog_35590	337.6	0	N/A	unknown function
eggNOG-mapper	UHGV-0076652_41	411473.RUMCAL_00613	119.0	1.39e-28	Collagen triple helix repeat (20 copies)	N/A
COG	UHGV-0076652_41	COG2931	N/A	N/A	Ca2+-binding protein, RTX toxin-related	N/A
structural_annotation	UHGV-0076652_41	PF07675,NF038128	N/A	N/A	N/A	N/A
PHROG	UHGV-0076652_43	phrog_1129	69.7	3.1e-20	holin	lysis
UniRef90	UHGV-0076652_43	UniRef90_A0A416MDZ9	123.0	6.42e-35	Enolase	N/A
eggNOG-mapper	UHGV-0076652_43	411473.RUMCAL_01944	164.0	0	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-0076652_43	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0076652_43	PF06946	N/A	N/A	N/A	N/A
KOfam	UHGV-0076652_44	K07273	177.9	0	acm; lysozyme	N/A
PHROG	UHGV-0076652_44	phrog_291	131.8	5.6e-39	endolysin	lysis
UniRef90	UHGV-0076652_44	UniRef90_U2K8D9	615.0	0	Glycosyl hydrolase family 25	N/A
eggNOG-mapper	UHGV-0076652_44	411473.RUMCAL_01945	615.0	0	hydrolase, family 25	N/A
Pfam	UHGV-0076652_44	PF08291	N/A	N/A	Peptidase M15	Peptidase_M15_3
Pfam	UHGV-0076652_44	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-0076652_44	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-0076652_44	PF01183,PF08291,NF007557,COG3757,COG3108	N/A	N/A	N/A	N/A
KOfam	UHGV-0076652_45	K00965	114.9	1.1e-33	galT, GALT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]	N/A
UniRef90	UHGV-0076652_45	UniRef90_A0A374EB95	953.0	0	Galactose-1-phosphate uridylyltransferase	N/A
eggNOG-mapper	UHGV-0076652_45	411473.RUMCAL_02091	634.0	0	Galactose-1-phosphate uridyl transferase, C-terminal domain	N/A
Pfam	UHGV-0076652_45	PF01087	N/A	N/A	Galactose-1-phosphate uridyl transferase, N-terminal domain	GalP_UDP_transf
Pfam	UHGV-0076652_45	PF02744	N/A	N/A	Galactose-1-phosphate uridyl transferase, C-terminal domain	GalP_UDP_tr_C
NCBIFam	UHGV-0076652_45	NF003629.0	N/A	N/A	UDP-glucose--hexose-1-phosphate uridylyltransferase	N/A
COG	UHGV-0076652_45	COG4468	N/A	N/A	Galactose-1-phosphate uridylyltransferase	N/A
HAMAP	UHGV-0076652_45	MF_00571	N/A	N/A	Galactose-1-phosphate uridylyltransferase [galT]	N/A