UHGV-0078130 (vOTU-025119)

Viral Genome: UHGV-0078130

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0078130
vOTU ID	vOTU-025119
Representative Genome?	Yes
Source	GPD
Original genome ID	uvig_162861
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	60.87 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	17
CheckV host markers	1
Recoded stop codon	No

Viral Content
geNomad score	0.9792
Virus hallmark genes (geNomad)	8
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	28.15
Jumbo phage	No

Genome content
Genome length (bp)	25,406
GC content	41.49%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	34
CDS density	96%
Average CDS length (bps)	718.06
Total tRNA genes	1
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 60.87)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0078130_3	phrog_36	46.8	0.00000000000056	transcriptional regulator	transcription regulation
UniRef90	UHGV-0078130_3	UniRef90_UPI000931D7F9	254.0	0	RNA polymerase subunit sigma-70	N/A
eggNOG-mapper	UHGV-0078130_3	411459.RUMOBE_00943	243.0	0	N/A	N/A
structural_annotation	UHGV-0078130_3	PF02996	N/A	N/A	N/A	N/A
UniRef90	UHGV-0078130_5	UniRef90_UPI001D06B9AB	432.0	0	toll/interleukin-1 receptor domain-containing protein	N/A
eggNOG-mapper	UHGV-0078130_5	1408473.JHXO01000001_gene1973	233.0	0	TIR domain	N/A
PADLOC	UHGV-0078130_5	Rst_TIR	41.8	0.000000000018	N/A	N/A
Pfam	UHGV-0078130_5	PF13676	N/A	N/A	TIR domain	TIR_2
COG	UHGV-0078130_5	COG4916	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0078130_5	PF13676,PF06483,NF040588,COG4916	N/A	N/A	N/A	N/A
PHROG	UHGV-0078130_7	phrog_1889	226.8	0	terminase small subunit	head and packaging
UniRef90	UHGV-0078130_7	UniRef90_UPI00189EABEF	379.0	0	phage terminase small subunit	N/A
eggNOG-mapper	UHGV-0078130_7	33035.JPJF01000107_gene435	252.0	0	N/A	N/A
Pfam	UHGV-0078130_7	PF06056	N/A	N/A	Putative ATPase subunit of terminase (gpP-like)	Terminase_5
NCBIFam	UHGV-0078130_7	NF040601.1	N/A	N/A	phage terminase small subunit	N/A
COG	UHGV-0078130_7	COG5484	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0078130_7	PF06056,NF040601,COG5484	N/A	N/A	N/A	N/A
KOfam	UHGV-0078130_8	K06909	144.7	8.99634e-43	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0078130_8	phrog_10250	220.3	0	N/A	unknown function
UniRef90	UHGV-0078130_8	UniRef90_A0A173WM22	873.0	0	Phage terminase, large subunit, PBSX family	N/A
eggNOG-mapper	UHGV-0078130_8	411490.ANACAC_00783	637.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-0078130_8	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
NCBIFam	UHGV-0078130_8	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0078130_8	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0078130_8	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0078130_9	phrog_64	389.2	0	portal protein	head and packaging
UniRef90	UHGV-0078130_9	UniRef90_UPI00189E99CC	798.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-0078130_9	742733.HMPREF9469_01826	594.0	0	Phage portal protein, SPP1 family	N/A
Pfam	UHGV-0078130_9	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
NCBIFam	UHGV-0078130_9	TIGR01538.1	N/A	N/A	phage portal protein	N/A
structural_annotation	UHGV-0078130_9	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
PHROG	UHGV-0078130_10	phrog_2841	329.5	0	minor head protein	head and packaging
UniRef90	UHGV-0078130_10	UniRef90_A0A1C5LC20	989.0	0	NAD(+)--arginine ADP-ribosyltransferase EFV	N/A
eggNOG-mapper	UHGV-0078130_10	742733.HMPREF9469_01825	366.0	0	Phage head morphogenesis protein, SPP1 gp7 family	N/A
Pfam	UHGV-0078130_10	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
NCBIFam	UHGV-0078130_10	TIGR01641.1	N/A	N/A	minor capsid protein	N/A
COG	UHGV-0078130_10	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0078130_10	PF15542,PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-0078130_12	phrog_1048	174.5	0	N/A	unknown function
UniRef90	UHGV-0078130_12	UniRef90_A0A373P4J3	297.0	0	N/A	N/A
eggNOG-mapper	UHGV-0078130_12	457412.RSAG_01107	278.0	0	N/A	N/A
Pfam	UHGV-0078130_12	PF11195	N/A	N/A	N/A	DUF2829
dbAPIS	UHGV-0078130_12	APIS029	N/A	N/A	Tad2 is a "sponge" that sequesters the immune signaling molecules produced by Thoeris TIR-domain proteins in response to phage.	N/A
structural_annotation	UHGV-0078130_12	PF11195	N/A	N/A	N/A	N/A
PHROG	UHGV-0078130_13	phrog_918	127.2	4e-38	N/A	unknown function
UniRef90	UHGV-0078130_13	UniRef90_UPI000E468F85	134.0	3.49e-39	N/A	N/A
eggNOG-mapper	UHGV-0078130_13	1140001.I571_01827	126.0	6.19e-37	N/A	N/A
Pfam	UHGV-0078130_13	PF19791	N/A	N/A	N/A	DUF6275
structural_annotation	UHGV-0078130_13	PF19791	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0078130_14	PF01281	N/A	N/A	N/A	N/A
PHROG	UHGV-0078130_15	phrog_172	158.1	0	head scaffolding protein	head and packaging
UniRef90	UHGV-0078130_15	UniRef90_A0A415FLT0	277.0	0	N/A	N/A
eggNOG-mapper	UHGV-0078130_15	742733.HMPREF9469_01824	199.0	0	N/A	N/A
Pfam	UHGV-0078130_15	PF14265	N/A	N/A	N/A	DUF4355
structural_annotation	UHGV-0078130_15	PF14265	N/A	N/A	N/A	N/A
PHROG	UHGV-0078130_16	phrog_422	296.4	0	major head protein	head and packaging
UniRef90	UHGV-0078130_16	UniRef90_A0A2H4JCM6	513.0	0	Putative capsid protein	N/A
eggNOG-mapper	UHGV-0078130_16	742733.HMPREF9469_01823	524.0	0	N/A	N/A
structural_annotation	UHGV-0078130_16	PF21703,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
PHROG	UHGV-0078130_17	phrog_2724	62.1	1e-17	N/A	unknown function
UniRef90	UHGV-0078130_17	UniRef90_A0A1C5LBF0	143.0	3.40516e-43	Rho termination factor, N-terminal domain	N/A
Pfam	UHGV-0078130_17	PF07498	N/A	N/A	Rho termination factor, N-terminal domain	Rho_N
COG	UHGV-0078130_17	COG0292	N/A	N/A	Ribosomal protein L20	N/A
structural_annotation	UHGV-0078130_17	PF07498	N/A	N/A	N/A	N/A
PHROG	UHGV-0078130_18	phrog_132	77.3	1.6e-22	head-tail adaptor	connector
UniRef90	UHGV-0078130_18	UniRef90_A0A1C5LAU6	210.0	0	Phage gp6-like head-tail connector protein	N/A
eggNOG-mapper	UHGV-0078130_18	742733.HMPREF9469_01821	145.0	7.9874e-44	Phage gp6-like head-tail connector protein	N/A
Pfam	UHGV-0078130_18	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
structural_annotation	UHGV-0078130_18	PF05135	N/A	N/A	N/A	N/A
PHROG	UHGV-0078130_19	phrog_2168	100.7	8.3e-30	N/A	unknown function
eggNOG-mapper	UHGV-0078130_19	1280689.AUJC01000003_gene969	84.3	1.5e-19	N/A	N/A
structural_annotation	UHGV-0078130_19	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0078130_20	phrog_5	94.2	1.7e-27	tail completion or Neck1 protein	connector
UniRef90	UHGV-0078130_20	UniRef90_A0A1C5LAB9	349.0	0	Phage protein, HK97 gp10 family	N/A
eggNOG-mapper	UHGV-0078130_20	742733.HMPREF9469_01819	192.0	0	Bacteriophage HK97-gp10, putative tail-component	N/A
Pfam	UHGV-0078130_20	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
NCBIFam	UHGV-0078130_20	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
structural_annotation	UHGV-0078130_20	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-0078130_21	phrog_78	49.8	0.00000000000005	tail terminator	connector
eggNOG-mapper	UHGV-0078130_21	742733.HMPREF9469_01818	144.0	3.18095e-43	N/A	N/A
structural_annotation	UHGV-0078130_21	PF05657	N/A	N/A	N/A	N/A
PHROG	UHGV-0078130_22	phrog_158	48.9	0.00000000000014	major tail protein	tail
UniRef90	UHGV-0078130_22	UniRef90_A0A1M7JWZ7	222.0	0	Phage tail tube protein, TTP	N/A
eggNOG-mapper	UHGV-0078130_22	742733.HMPREF9469_01817	196.0	0	Phage tail tube protein, TTP	N/A
structural_annotation	UHGV-0078130_22	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0078130_23	phrog_183	50.7	0.000000000000026	tail chaperone protein	tail
UniRef90	UHGV-0078130_23	UniRef90_UPI001D069341	159.0	0	N/A	N/A
eggNOG-mapper	UHGV-0078130_23	742733.HMPREF9469_01816	118.0	2.89e-32	N/A	N/A
structural_annotation	UHGV-0078130_23	PF19591	N/A	N/A	N/A	N/A
PHROG	UHGV-0078130_24	phrog_2066	61.9	1.2e-17	N/A	unknown function
eggNOG-mapper	UHGV-0078130_24	1123304.AQYA01000037_gene232	64.3	0.0000000000128	N/A	N/A
PHROG	UHGV-0078130_25	phrog_1535	236.4	0	tail length tape measure protein	tail
UniRef90	UHGV-0078130_25	UniRef90_A0A1C5L9Y5	1660.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0078130_25	1304866.K413DRAFT_3046	209.0	0	N/A	N/A
COG	UHGV-0078130_25	COG5283	N/A	N/A	Phage-related tail protein	N/A
PHROG	UHGV-0078130_26	phrog_1194	82.0	6.1e-24	N/A	unknown function
eggNOG-mapper	UHGV-0078130_26	1121866.AUGK01000003_gene1438	79.3	2.02e-17	N/A	N/A
Pfam	UHGV-0078130_26	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-0078130_26	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0078130_27	phrog_6616	517.4	0	tail protein	tail
UniRef90	UHGV-0078130_27	UniRef90_A0A414EG21	419.0	0	Tail fiber domain-containing protein	N/A
eggNOG-mapper	UHGV-0078130_27	476272.RUMHYD_01992	521.0	0	N/A	N/A
structural_annotation	UHGV-0078130_27	PF05113,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-0078130_28	phrog_18444	72.7	3.2e-21	N/A	unknown function
eggNOG-mapper	UHGV-0078130_28	411459.RUMOBE_00912	92.8	2.25e-24	N/A	N/A
eggNOG-mapper	UHGV-0078130_29	1121866.AUGK01000003_gene1445	81.6	0.00000000000000893	N/A	N/A
PHROG	UHGV-0078130_30	phrog_16164	270.6	0	N/A	unknown function
eggNOG-mapper	UHGV-0078130_30	457412.RSAG_01113	78.6	0.0000000000000184	N/A	N/A
structural_annotation	UHGV-0078130_30	PF10651,NF032891	N/A	N/A	N/A	N/A
KOfam	UHGV-0078130_31	K10804	68.6	1.3e-19	tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]	N/A
PHROG	UHGV-0078130_31	phrog_11541	76.3	3.5e-22	N/A	unknown function
UniRef90	UHGV-0078130_31	UniRef90_A0A1C5L8V0	1499.0	0	GDSL-like Lipase/Acylhydrolase	N/A
eggNOG-mapper	UHGV-0078130_31	880070.Cycma_0058	95.1	2.83e-17	GDSL-like Lipase/Acylhydrolase family	N/A
Pfam	UHGV-0078130_31	PF13472	N/A	N/A	GDSL-like Lipase/Acylhydrolase family	Lipase_GDSL_2
COG	UHGV-0078130_31	COG2755	N/A	N/A	Lysophospholipase L1 or related esterase. Includes spore coat protein LipC/YcsK	N/A
PHROG	UHGV-0078130_32	phrog_4105	90.2	1.8e-26	N/A	unknown function
eggNOG-mapper	UHGV-0078130_32	411459.RUMOBE_00911	194.0	0	N/A	N/A
PHROG	UHGV-0078130_33	phrog_18218	137.9	2.70002e-41	N/A	unknown function
UniRef90	UHGV-0078130_33	UniRef90_UPI001C0EBFB3	183.0	0	ribonuclease	N/A
eggNOG-mapper	UHGV-0078130_33	411459.RUMOBE_00910	193.0	0	N/A	N/A
structural_annotation	UHGV-0078130_33	PF06946	N/A	N/A	N/A	N/A
KOfam	UHGV-0078130_34	K07273	109.2	5.4e-32	acm; lysozyme	N/A
PHROG	UHGV-0078130_34	phrog_291	88.1	1.5e-25	endolysin	lysis
UniRef90	UHGV-0078130_34	UniRef90_E6JZS3	85.5	5.3e-19	Glycosyl hydrolase family 25	N/A
eggNOG-mapper	UHGV-0078130_34	457412.RSAG_00790	185.0	0	CHAP domain	N/A
Pfam	UHGV-0078130_34	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-0078130_34	COG3409	N/A	N/A	Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases	N/A
structural_annotation	UHGV-0078130_34	PF01183,TIGR02494,COG3757	N/A	N/A	N/A	N/A