UHGV-0079031 (vOTU-088720)

Viral Genome: UHGV-0079031

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0079031
vOTU ID	vOTU-088720
Representative Genome?	Yes
Source	GPD
Original genome ID	uvig_152030
Associated BioSample	SAMEA2784455
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	52.33 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	12
CheckV host markers	1
Recoded stop codon	No

Viral Content
geNomad score	0.9638
Virus hallmark genes (geNomad)	15
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	25.06
Jumbo phage	No

Genome content
Genome length (bp)	24,877
GC content	30.03%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	36
CDS density	93%
Average CDS length (bps)	644.25
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 52.33)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-0079031_1	UniRef90_UPI000558AC94	107.0	9.52e-28	ParA family protein	N/A
eggNOG-mapper	UHGV-0079031_1	1196322.A370_05740	137.0	3.71e-38	Cellulose biosynthesis protein BcsQ	N/A
COG	UHGV-0079031_1	COG1192	N/A	N/A	ParA-like ATPase involved in chromosome/plasmid partitioning or cellulose biosynthesis protein BcsQ	N/A
KOfam	UHGV-0079031_2	K03497	93.3	4.9e-27	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	N/A
PHROG	UHGV-0079031_2	phrog_4715	199.2	0	ParB-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0079031_2	UniRef90_A0A3P6KLC4	630.0	0	ParB protein	N/A
eggNOG-mapper	UHGV-0079031_2	1196322.A370_05736	390.0	0	Belongs to the ParB family	N/A
Pfam	UHGV-0079031_2	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
COG	UHGV-0079031_2	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-0079031_2	PF02195,MF_02015,TIGR04285,COG1475	N/A	N/A	N/A	N/A
KOfam	UHGV-0079031_3	K03111	146.1	3.69943e-43	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0079031_3	phrog_44	141.7	4.69996e-42	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0079031_3	UniRef90_A0A3P6K6T1	293.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0079031_3	632245.CLP_4116	191.0	0	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-0079031_3	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0079031_3	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0079031_3	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0079031_3	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0079031_3	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0079031_4	phrog_1389	81.2	1.2e-23	N/A	unknown function
UniRef90	UHGV-0079031_4	UniRef90_A0A3P6KVP0	196.0	0	N/A	N/A
eggNOG-mapper	UHGV-0079031_4	632245.CLP_2637	144.0	1.98984e-43	N/A	N/A
structural_annotation	UHGV-0079031_4	PF11056,TIGR04376,COG1842	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0079031_6	632245.CLP_2927	65.1	0.000000000000698	N/A	N/A
KOfam	UHGV-0079031_8	K08984	306.7	0	yjdF; putative membrane protein	N/A
UniRef90	UHGV-0079031_8	UniRef90_A0A3P6K2K2	345.0	0	Sodium-glucose/galactose cotransporter	N/A
eggNOG-mapper	UHGV-0079031_8	1415774.U728_1265	320.0	0	N/A	N/A
Pfam	UHGV-0079031_8	PF09997	N/A	N/A	N/A	DUF2238
COG	UHGV-0079031_8	COG3647	N/A	N/A	N/A	N/A
PHROG	UHGV-0079031_11	phrog_36	42.8	0.000000000012	transcriptional regulator	transcription regulation
UniRef90	UHGV-0079031_11	UniRef90_A0A7G9W8C4	87.0	4.78e-18	Sigma-70 family RNA polymerase sigma factor	N/A
eggNOG-mapper	UHGV-0079031_11	1415774.U728_493	193.0	0	DNA-templated transcription, initiation	N/A
COG	UHGV-0079031_11	COG1595	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	N/A
structural_annotation	UHGV-0079031_11	PF05263,TIGR01636	N/A	N/A	N/A	N/A
KOfam	UHGV-0079031_12	K22014	58.1	2e-16	Nu1, Noh; terminase small subunit / prophage DNA-packing protein	N/A
PHROG	UHGV-0079031_12	phrog_57	108.4	8.9e-32	terminase small subunit	head and packaging
UniRef90	UHGV-0079031_12	UniRef90_A0A3P6JQE4	352.0	0	Phage DNA packaging protein, Nu1 subunit of terminase	N/A
eggNOG-mapper	UHGV-0079031_12	1157490.EL26_01795	117.0	6.51e-31	N/A	N/A
COG	UHGV-0079031_12	COG4220	N/A	N/A	Phage DNA packaging protein, Nu1 subunit of terminase	N/A
structural_annotation	UHGV-0079031_12	PF07471,NF040990,COG4220	N/A	N/A	N/A	N/A
KOfam	UHGV-0079031_13	K21512	514.9	0	gpA; terminase, large subunit [EC:3.1.21.4]	N/A
PHROG	UHGV-0079031_13	phrog_15	627.1	0	terminase large subunit	head and packaging
UniRef90	UHGV-0079031_13	UniRef90_A0A3P6KP95	1227.0	0	Phage terminase GpA	N/A
eggNOG-mapper	UHGV-0079031_13	198467.NP92_02805	805.0	0	Phage terminase large subunit (GpA)	N/A
Pfam	UHGV-0079031_13	PF05876	N/A	N/A	Phage terminase large subunit gpA, ATPase domain	GpA_ATPase
Pfam	UHGV-0079031_13	PF20454	N/A	N/A	Terminase large subunit gpA, endonuclease domain	GpA_nuclease
COG	UHGV-0079031_13	COG5525	N/A	N/A	Phage terminase, large subunit GpA	N/A
HAMAP	UHGV-0079031_13	MF_04144	N/A	N/A	Terminase, large subunit	N/A
structural_annotation	UHGV-0079031_13	PF05876,PF20454,MF_04144,TIGR01547,COG5525	N/A	N/A	N/A	N/A
PHROG	UHGV-0079031_14	phrog_118	84.0	1.1e-24	head-tail adaptor	connector
UniRef90	UHGV-0079031_14	UniRef90_UPI001C0F6755	101.0	1.82e-26	N/A	N/A
eggNOG-mapper	UHGV-0079031_14	97139.C824_00717	100.0	4.33e-27	N/A	N/A
Pfam	UHGV-0079031_14	PF19645	N/A	N/A	N/A	DUF6148
structural_annotation	UHGV-0079031_14	PF19645	N/A	N/A	N/A	N/A
PHROG	UHGV-0079031_15	phrog_21	381.4	0	portal protein	head and packaging
UniRef90	UHGV-0079031_15	UniRef90_A0A3P6JFS8	1037.0	0	Phage portal protein, lambda family	N/A
eggNOG-mapper	UHGV-0079031_15	1449063.JMLS01000030_gene449	607.0	0	Phage portal protein, lambda family	N/A
Pfam	UHGV-0079031_15	PF05136	N/A	N/A	Phage portal protein, lambda family	Phage_portal_2
NCBIFam	UHGV-0079031_15	TIGR01539.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-0079031_15	COG5511	N/A	N/A	Phage capsid protein	N/A
structural_annotation	UHGV-0079031_15	PF05136,MF_04135,TIGR01539,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0079031_16	K01358	131.3	1e-38	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-0079031_16	phrog_94	187.1	0	head maturation protease	head and packaging
UniRef90	UHGV-0079031_16	UniRef90_A0A3P6K2J4	723.0	0	ATP-dependent Clp protease proteolytic subunit	N/A
eggNOG-mapper	UHGV-0079031_16	1460634.JCM19037_4598	216.0	0	Belongs to the peptidase S14 family	N/A
Pfam	UHGV-0079031_16	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-0079031_16	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-0079031_16	PF00574,MF_00444,NF011089,COG0740	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0079031_17	411463.EUBVEN_00446	63.2	0.0000000000304	N/A	N/A
PHROG	UHGV-0079031_18	phrog_29	229.8	0	major head protein	head and packaging
UniRef90	UHGV-0079031_18	UniRef90_A0A3P6KA06	699.0	0	Phage major capsid protein E	N/A
eggNOG-mapper	UHGV-0079031_18	411463.EUBVEN_00445	397.0	0	Phage major capsid protein E	N/A
Pfam	UHGV-0079031_18	PF03864	N/A	N/A	Phage major capsid protein E	Phage_cap_E
structural_annotation	UHGV-0079031_18	PF03864,MF_04133,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0079031_19	phrog_2551	73.8	2.3e-21	minor tail protein	tail
eggNOG-mapper	UHGV-0079031_19	1415774.U728_503	106.0	1.62e-28	N/A	N/A
structural_annotation	UHGV-0079031_19	PF13856	N/A	N/A	N/A	N/A
PHROG	UHGV-0079031_20	phrog_27	113.9	1.6e-33	tail completion or Neck1 protein	connector
UniRef90	UHGV-0079031_20	UniRef90_UPI0005579931	198.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-0079031_20	1211817.CCAT010000013_gene3180	198.0	0	Prophage minor tail protein Z (GPZ)	N/A
Pfam	UHGV-0079031_20	PF06763	N/A	N/A	Prophage minor tail protein Z (GPZ)	Minor_tail_Z
structural_annotation	UHGV-0079031_20	PF06763	N/A	N/A	N/A	N/A
PHROG	UHGV-0079031_21	phrog_2581	105.1	5e-31	virion structural protein	head and packaging
eggNOG-mapper	UHGV-0079031_21	1415774.U728_505	199.0	0	N/A	N/A
structural_annotation	UHGV-0079031_21	PF06141,COG5003	N/A	N/A	N/A	N/A
KOfam	UHGV-0079031_22	K06907	75.2	6.6e-22	N/A	N/A
PHROG	UHGV-0079031_22	phrog_23	132.2	2.2e-39	tail sheath	tail
UniRef90	UHGV-0079031_22	UniRef90_A0A3P6KBB6	929.0	0	Phage tail sheath protein FI	N/A
eggNOG-mapper	UHGV-0079031_22	1211817.CCAT010000013_gene3178	634.0	0	COG3497 Phage tail sheath protein FI	N/A
COG	UHGV-0079031_22	COG3497	N/A	N/A	Phage tail sheath protein FI	N/A
structural_annotation	UHGV-0079031_22	PF10758,TIGR03355,COG3497	N/A	N/A	N/A	N/A
KOfam	UHGV-0079031_23	K06908	83.4	3.9e-24	N/A	N/A
PHROG	UHGV-0079031_23	phrog_55	92.6	3.7e-27	head closure	connector
UniRef90	UHGV-0079031_23	UniRef90_A0A3P6KP86	325.0	0	Putative phage major tail tube protein	N/A
eggNOG-mapper	UHGV-0079031_23	1415774.U728_507	188.0	0	phage major tail tube protein	N/A
Pfam	UHGV-0079031_23	PF04985	N/A	N/A	Phage tail tube protein FII	Phage_tube
COG	UHGV-0079031_23	COG3498	N/A	N/A	Phage tail tube protein FII	N/A
structural_annotation	UHGV-0079031_23	PF04985,TIGR01611,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-0079031_24	phrog_3140	50.0	0.000000000000055	tail assembly chaperone	tail
UniRef90	UHGV-0079031_24	UniRef90_A0A846K252	84.7	7.53e-19	Phage tail assembly protein	N/A
eggNOG-mapper	UHGV-0079031_24	1415774.U728_508	84.7	1.26e-19	N/A	N/A
structural_annotation	UHGV-0079031_24	PF10109	N/A	N/A	N/A	N/A
PHROG	UHGV-0079031_25	phrog_1272	304.6	0	tail length tape measure protein	tail
UniRef90	UHGV-0079031_25	UniRef90_A0A3P6K829	1263.0	0	Phage tail tape measure protein, TP901 family	N/A
eggNOG-mapper	UHGV-0079031_25	1151292.QEW_4525	309.0	0	nuclear chromosome segregation	N/A
Pfam	UHGV-0079031_25	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
NCBIFam	UHGV-0079031_25	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
COG	UHGV-0079031_25	COG5280	N/A	N/A	Phage-related minor tail protein	N/A
structural_annotation	UHGV-0079031_25	PF10145,TIGR01760,COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-0079031_26	phrog_46	49.5	0.000000000000057	tail protein	tail
UniRef90	UHGV-0079031_26	UniRef90_A0A3P6JMP9	143.0	1.31722e-43	Phage tail protein gpX	N/A
eggNOG-mapper	UHGV-0079031_26	1291050.JAGE01000001_gene446	73.6	1.44e-16	Phage Tail Protein X	N/A
Pfam	UHGV-0079031_26	PF05489	N/A	N/A	Phage Tail Protein X	Phage_tail_X
structural_annotation	UHGV-0079031_26	PF05489,TIGR02899,COG5004	N/A	N/A	N/A	N/A
KOfam	UHGV-0079031_27	K06905	118.3	7.6e-35	N/A	N/A
PHROG	UHGV-0079031_27	phrog_52	109.6	2.9e-32	tail protein	tail
UniRef90	UHGV-0079031_27	UniRef90_A0A3P6KSU8	594.0	0	Phage protein D	N/A
eggNOG-mapper	UHGV-0079031_27	1415774.U728_511	319.0	0	COG3500 Phage protein D	N/A
COG	UHGV-0079031_27	COG3500	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0079031_27	PF05954,NF033848,COG3500	N/A	N/A	N/A	N/A
UniRef90	UHGV-0079031_28	UniRef90_A0A3P6JU61	127.0	2.09e-37	Putative phage baseplate assembly protein V	N/A
PHROG	UHGV-0079031_29	phrog_15956	61.6	1.3e-17	tail assembly protein	tail
UniRef90	UHGV-0079031_29	UniRef90_UPI001570DC07	170.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-0079031_29	1211817.CCAT010000013_gene3170	164.0	0	Phage P2 GpU	N/A
Pfam	UHGV-0079031_29	PF06995	N/A	N/A	Phage P2 GpU	Phage_P2_GpU
COG	UHGV-0079031_29	COG3499	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0079031_29	PF06995,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0079031_30	phrog_43	50.9	0.000000000000021	baseplate wedge subunit	tail
UniRef90	UHGV-0079031_30	UniRef90_A0A3P6KPY8	191.0	0	Putative GPW/gp25 family protein	N/A
eggNOG-mapper	UHGV-0079031_30	1211817.CCAT010000013_gene3169	99.0	8.78e-26	N/A	N/A
Pfam	UHGV-0079031_30	PF04965	N/A	N/A	Baseplate wedge protein gp25	GPW_gp25
structural_annotation	UHGV-0079031_30	PF04965,TIGR03357,COG3628	N/A	N/A	N/A	N/A
PHROG	UHGV-0079031_31	phrog_6	214.2	0	baseplate protein	tail
UniRef90	UHGV-0079031_31	UniRef90_A0A3P6KBC8	748.0	0	Baseplate J family protein	N/A
eggNOG-mapper	UHGV-0079031_31	1211817.CCAT010000013_gene3168	518.0	0	Baseplate J-like protein	N/A
Pfam	UHGV-0079031_31	PF04865	N/A	N/A	Baseplate J-like protein	Baseplate_J
COG	UHGV-0079031_31	COG3948	N/A	N/A	Phage-related baseplate assembly protein	N/A
structural_annotation	UHGV-0079031_31	PF04865,PF21379,MF_04102,TIGR02243,COG3948	N/A	N/A	N/A	N/A
PHROG	UHGV-0079031_32	phrog_14404	153.4	1.4013e-45	baseplate protein	tail
UniRef90	UHGV-0079031_32	UniRef90_A0A3P6KBA7	431.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-0079031_32	1415774.U728_516	305.0	0	Phage tail protein (Tail_P2_I)	N/A
Pfam	UHGV-0079031_32	PF09684	N/A	N/A	Phage tail protein (Tail_P2_I)	Tail_P2_I
NCBIFam	UHGV-0079031_32	TIGR01634.1	N/A	N/A	phage tail protein I	N/A
COG	UHGV-0079031_32	COG4385	N/A	N/A	Bacteriophage P2-related tail formation protein	N/A
structural_annotation	UHGV-0079031_32	PF09684,TIGR01634,COG4385	N/A	N/A	N/A	N/A
PHROG	UHGV-0079031_33	phrog_1780	245.7	0	tail collar fiber protein	tail
UniRef90	UHGV-0079031_33	UniRef90_A0A3P6JGM3	498.0	0	Putative phage tail fiber protein	N/A
eggNOG-mapper	UHGV-0079031_33	931276.Cspa_c27090	342.0	0	Phage tail-collar fibre protein	N/A
Pfam	UHGV-0079031_33	PF12571	N/A	N/A	Phage tail-collar fibre protein	DUF3751
COG	UHGV-0079031_33	COG5301	N/A	N/A	Phage-related tail fiber protein	N/A
PHROG	UHGV-0079031_34	phrog_19111	52.2	3.8e-17	N/A	unknown function
UniRef90	UHGV-0079031_34	UniRef90_A0A3P6JU71	139.0	3.09e-39	Tail fiber protein	N/A
eggNOG-mapper	UHGV-0079031_36	1415774.U728_1648	54.7	0.0000000013	N/A	N/A