UHGV-0079663 (vOTU-122667)

Viral Genome: UHGV-0079663

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0079663
vOTU ID	vOTU-122667
Representative Genome?	Yes
Source	GPD
Original genome ID	uvig_142014
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	HMM-based
CheckV completeness	63.48 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	23
CheckV host markers	3
Recoded stop codon	No

Viral Content
geNomad score	0.8879
Virus hallmark genes (geNomad)	7
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	68.91
Jumbo phage	No

Genome content
Genome length (bp)	57,701
GC content	26.94%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	104
CDS density	87%
Average CDS length (bps)	484.39
Total tRNA genes	2
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 63.48)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0079663_3	K00797	40.1	0.000000000045	speE, SRM, SPE3; spermidine synthase [EC:2.5.1.16]	N/A
PHROG	UHGV-0079663_3	phrog_15480	112.5	4.2e-33	methyltransferase	other
UniRef90	UHGV-0079663_3	UniRef90_A0A2I4NP55	116.0	1.95e-29	AdoMet dependent proline di-methyltransferase family protein	N/A
eggNOG-mapper	UHGV-0079663_3	1484157.PSNIH2_21345	118.0	1.32e-30	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine	N/A
COG	UHGV-0079663_3	COG4262	N/A	N/A	Predicted spermidine synthase with an N-terminal membrane domain	N/A
structural_annotation	UHGV-0079663_3	PF05175,MF_02100,NF041650,COG2521	N/A	N/A	N/A	N/A
KOfam	UHGV-0079663_7	K03111	123.8	2.3e-36	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0079663_7	phrog_44	136.0	2.6e-40	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0079663_7	UniRef90_UPI0015A2C724	206.0	0	single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0079663_7	1408439.JHXW01000003_gene1637	189.0	0	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-0079663_7	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0079663_7	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0079663_7	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0079663_7	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0079663_7	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
Pfam	UHGV-0079663_8	PF10957	N/A	N/A	Sporulation protein Cse60	Spore_Cse60
PHROG	UHGV-0079663_9	phrog_32703	151.5	4.2039e-45	N/A	unknown function
UniRef90	UHGV-0079663_9	UniRef90_UPI001B8BA952	565.0	0	class I SAM-dependent methyltransferase	N/A
eggNOG-mapper	UHGV-0079663_9	1450694.BTS2_3308	455.0	0	N/A	N/A
Pfam	UHGV-0079663_9	PF13708	N/A	N/A	N/A	DUF4942
COG	UHGV-0079663_9	COG0827	N/A	N/A	Adenine-specific DNA N6-methylase	N/A
structural_annotation	UHGV-0079663_9	PF13708,PF00398,MF_00607,NF011489,COG2263	N/A	N/A	N/A	N/A
KOfam	UHGV-0079663_10	K02342	88.1	9.4e-26	dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]	N/A
PHROG	UHGV-0079663_10	phrog_192	110.9	1.3e-32	DNA polymerase exonuclease subunit	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0079663_10	UniRef90_A0A017H629	208.0	0	Exonuclease	N/A
eggNOG-mapper	UHGV-0079663_10	1095747.HMPREF1049_0987	208.0	0	Exonuclease	N/A
PADLOC	UHGV-0079663_10	cd06127	75.4	2.2e-21	CAS-I,CAS-II,CAS-III,CAS-IV,CAS-V,CAS-VI; associated	CRISPR-CAS
Pfam	UHGV-0079663_10	PF00929	N/A	N/A	Exonuclease	RNase_T
COG	UHGV-0079663_10	COG0847	N/A	N/A	DNA polymerase III, epsilon subunit or related 3'-5' exonuclease	N/A
structural_annotation	UHGV-0079663_10	PF00929,MF_00157,TIGR01298,COG0847	N/A	N/A	N/A	N/A
PHROG	UHGV-0079663_11	phrog_155	70.3	4.3e-20	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0079663_11	UniRef90_UPI000E528CB8	142.0	5.48e-37	ERF family protein	N/A
eggNOG-mapper	UHGV-0079663_11	272563.CD630_29440	103.0	6.06e-24	ERF superfamily	N/A
Pfam	UHGV-0079663_11	PF04404	N/A	N/A	ERF superfamily	ERF
KOfam	UHGV-0079663_17	K01356	108.2	1.4e-31	lexA; repressor LexA [EC:3.4.21.88]	N/A
PHROG	UHGV-0079663_17	phrog_4	109.1	5.1e-32	transcriptional repressor	transcription regulation
UniRef90	UHGV-0079663_17	UniRef90_UPI001F1D6F8C	239.0	0	S24 family peptidase	N/A
eggNOG-mapper	UHGV-0079663_17	469618.FVAG_02541	219.0	0	Peptidase S24-like	N/A
Pfam	UHGV-0079663_17	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
Pfam	UHGV-0079663_17	PF00717	N/A	N/A	Peptidase S24-like	Peptidase_S24
COG	UHGV-0079663_17	COG2932	N/A	N/A	Phage repressor protein C, contains Cro/C1-type HTH and peptisase s24 domains	N/A
UniRef90	UHGV-0079663_21	UniRef90_A0A0X8JVE3	54.7	0.0000000497	HTH cro/C1-type domain-containing protein	N/A
Pfam	UHGV-0079663_21	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
COG	UHGV-0079663_21	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
PHROG	UHGV-0079663_23	phrog_3675	95.3	3.8e-28	N/A	unknown function
UniRef90	UHGV-0079663_23	UniRef90_UPI001F291C97	135.0	2.41e-39	YjcQ family protein	N/A
eggNOG-mapper	UHGV-0079663_23	1122172.KB890259_gene1443	118.0	4.05e-33	YjcQ protein	N/A
Pfam	UHGV-0079663_23	PF09639	N/A	N/A	YjcQ protein	YjcQ
structural_annotation	UHGV-0079663_23	PF09639,TIGR04176,COG2345	N/A	N/A	N/A	N/A
PHROG	UHGV-0079663_24	phrog_7882	62.7	8.5e-18	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0079663_24	UniRef90_UPI0007881CE2	148.0	1.76e-37	replication initiator protein A	N/A
eggNOG-mapper	UHGV-0079663_24	469615.FGAG_01218	148.0	4.11e-38	DnaD domain protein	N/A
Pfam	UHGV-0079663_24	PF06970	N/A	N/A	Replication initiator protein A (RepA) N-terminus	RepA_N
COG	UHGV-0079663_24	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0079663_24	PF06970,NF040939,COG3355	N/A	N/A	N/A	N/A
PHROG	UHGV-0079663_25	phrog_398	135.8	2e-40	N/A	unknown function
UniRef90	UHGV-0079663_25	UniRef90_UPI00195E7E51	242.0	0	putative HNHc nuclease	N/A
eggNOG-mapper	UHGV-0079663_25	1227268.HMPREF1552_01545	164.0	0	Putative HNHc nuclease	N/A
Pfam	UHGV-0079663_25	PF16784	N/A	N/A	Putative HNHc nuclease	HNHc_6
structural_annotation	UHGV-0079663_25	PF16784	N/A	N/A	N/A	N/A
PHROG	UHGV-0079663_26	phrog_59	127.8	5.4e-38	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0079663_26	UniRef90_UPI001F2E8D32	140.0	7.46e-39	NUMOD4 domain-containing protein	N/A
eggNOG-mapper	UHGV-0079663_26	1443122.Z958_05765	130.0	9.51e-36	NUMOD4 motif	N/A
PADLOC	UHGV-0079663_26	HEase_00016	89.8	9.4e-27	homing endonuclease	RM
Pfam	UHGV-0079663_26	PF07463	N/A	N/A	NUMOD4 motif	NUMOD4
Pfam	UHGV-0079663_26	PF13392	N/A	N/A	HNH endonuclease	HNH_3
structural_annotation	UHGV-0079663_26	PF07463,PF07453,TIGR01453	N/A	N/A	N/A	N/A
PHROG	UHGV-0079663_28	phrog_1305	132.0	3.8e-39	DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0079663_28	UniRef90_A0A7X6P6E6	175.0	0	N/A	N/A
eggNOG-mapper	UHGV-0079663_28	1238184.CM001792_gene2528	123.0	9.46e-32	N/A	N/A
structural_annotation	UHGV-0079663_28	COG2250	N/A	N/A	N/A	N/A
PHROG	UHGV-0079663_30	phrog_2329	53.9	0.0000000000000025	N/A	unknown function
UniRef90	UHGV-0079663_30	UniRef90_UPI0001A35AE8	66.6	0.000000000000205	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	N/A
eggNOG-mapper	UHGV-0079663_30	469616.FMAG_02619	86.7	4.09e-22	N/A	N/A
structural_annotation	UHGV-0079663_30	MF_01193,NF007312,COG2336	N/A	N/A	N/A	N/A
PHROG	UHGV-0079663_31	phrog_2329	71.2	1.1e-20	N/A	unknown function
UniRef90	UHGV-0079663_31	UniRef90_UPI001957B04D	86.3	3.7e-21	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	N/A
eggNOG-mapper	UHGV-0079663_31	469616.FMAG_01930	68.2	0.00000000000000921	N/A	N/A
structural_annotation	UHGV-0079663_31	MF_01193,NF007312,COG2336	N/A	N/A	N/A	N/A
PHROG	UHGV-0079663_33	phrog_524	100.5	2.7e-29	anti-repressor Ant	transcription regulation
UniRef90	UHGV-0079663_33	UniRef90_A0A510JAM2	157.0	8.40779e-45	P22_AR_N domain-containing protein	N/A
eggNOG-mapper	UHGV-0079663_33	526218.Sterm_0815	134.0	8.82e-37	Transposase (IS116 IS110 IS902 family)	N/A
Pfam	UHGV-0079663_33	PF10547	N/A	N/A	P22_AR N-terminal domain	P22_AR_N
COG	UHGV-0079663_33	COG3547	N/A	N/A	Transposase	N/A
structural_annotation	UHGV-0079663_33	PF10547,TIGR02681,COG3617	N/A	N/A	N/A	N/A
PHROG	UHGV-0079663_37	phrog_323	77.2	2.2e-32	endonuclease	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0079663_37	545693.BMQ_1855	55.1	0.00000138	SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains	N/A
Pfam	UHGV-0079663_37	PF08281	N/A	N/A	Sigma-70, region 4	Sigma70_r4_2
Pfam	UHGV-0079663_37	PF08279	N/A	N/A	HTH domain	HTH_11
Pfam	UHGV-0079663_37	PF13384	N/A	N/A	Homeodomain-like domain	HTH_23
dbAPIS	UHGV-0079663_37	APIS006	N/A	N/A	Trigger programmed cell death (PCD) by P4 prophage.	N/A
PHROG	UHGV-0079663_40	phrog_9467	106.8	1.5e-31	N/A	unknown function
UniRef90	UHGV-0079663_40	UniRef90_UPI0019575C0B	172.0	0	Gp49 family protein	N/A
eggNOG-mapper	UHGV-0079663_40	1305708.M9Q2I2_9CAUD	119.0	2.74e-32	Phage protein (N4 Gp49/phage Sf6 gene 66) family	N/A
Pfam	UHGV-0079663_40	PF13876	N/A	N/A	N/A	Phage_gp49_66
dbAPIS	UHGV-0079663_40	APIS043	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0079663_40	PF13876	N/A	N/A	N/A	N/A
PHROG	UHGV-0079663_41	phrog_236	48.6	0.00000000000024	nucleotide kinase	other
UniRef90	UHGV-0079663_41	UniRef90_UPI001F48510C	111.0	6.24e-30	N/A	N/A
Pfam	UHGV-0079663_41	PF11753	N/A	N/A	N/A	DUF3310
UniRef90	UHGV-0079663_44	UniRef90_UPI0006481866	110.0	9.81e-29	VRR-NUC domain-containing protein	N/A
eggNOG-mapper	UHGV-0079663_44	469618.FVAG_00788	102.0	1.63e-26	VRR_NUC	N/A
structural_annotation	UHGV-0079663_44	PF03838,MF_00130,NF002585,COG3331	N/A	N/A	N/A	N/A
KOfam	UHGV-0079663_45	K24072	52.8	0.0000000000000072	xpf; positive control factor	N/A
PHROG	UHGV-0079663_45	phrog_1190	48.3	0.00000000000018	RNA polymerase sigma factor	transcription regulation
UniRef90	UHGV-0079663_45	UniRef90_C3WET4	116.0	7.6e-32	Sigma70_r4 domain-containing protein	N/A
Pfam	UHGV-0079663_45	PF08281	N/A	N/A	Sigma-70, region 4	Sigma70_r4_2
PHROG	UHGV-0079663_51	phrog_98	70.3	3e-20	N/A	unknown function
UniRef90	UHGV-0079663_51	UniRef90_UPI001F489B00	126.0	5.09e-35	YopX family protein	N/A
eggNOG-mapper	UHGV-0079663_51	1499683.CCFF01000017_gene2588	60.8	0.000000000401	YopX protein	N/A
Pfam	UHGV-0079663_51	PF09643	N/A	N/A	YopX protein	YopX
structural_annotation	UHGV-0079663_51	PF09643,TIGR01671	N/A	N/A	N/A	N/A
PHROG	UHGV-0079663_56	phrog_625	97.5	8.9e-29	N/A	unknown function
eggNOG-mapper	UHGV-0079663_56	1244531.CIG1485E_a0025	89.7	1.3e-20	N/A	N/A
eggNOG-mapper	UHGV-0079663_62	985255.APHJ01000048_gene409	57.0	0.00000522	N/A	N/A
eggNOG-mapper	UHGV-0079663_63	1410625.JHWK01000002_gene66	67.0	0.0000000000581	N/A	N/A
eggNOG-mapper	UHGV-0079663_64	556263.FSEG_02020	58.5	0.000000000345	N/A	N/A
UniRef90	UHGV-0079663_65	UniRef90_A0A098Z9Y9	51.6	0.00000022	Prophage Sa05, CopG family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0079663_65	663952.SDD27957_09060	48.1	0.000000906	N/A	N/A
structural_annotation	UHGV-0079663_65	PF01402,NF041793,COG3905	N/A	N/A	N/A	N/A
KOfam	UHGV-0079663_67	K07741	223.0	0	antB; anti-repressor protein	N/A
PHROG	UHGV-0079663_67	phrog_63	185.9	0	anti-repressor Ant	transcription regulation
UniRef90	UHGV-0079663_67	UniRef90_A0A8G0JZC1	366.0	0	Phage antirepressor KilAC domain-containing protein	N/A
eggNOG-mapper	UHGV-0079663_67	386415.NT01CX_2199	301.0	0	Phage antirepressor protein	N/A
Pfam	UHGV-0079663_67	PF08346	N/A	N/A	AntA/AntB antirepressor	AntA
Pfam	UHGV-0079663_67	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
COG	UHGV-0079663_67	COG3561	N/A	N/A	Phage anti-repressor protein Ant	N/A
structural_annotation	UHGV-0079663_67	PF03374,PF08346,TIGR02681,COG3645,COG3561	N/A	N/A	N/A	N/A
UniRef90	UHGV-0079663_68	UniRef90_UPI00044A0E47	112.0	6.13e-24	HEPN domain-containing protein	N/A
eggNOG-mapper	UHGV-0079663_68	78398.KS43_15955	61.2	0.000000226	N/A	N/A
KOfam	UHGV-0079663_69	K07496	313.9	0	K07496; putative transposase	N/A
PHROG	UHGV-0079663_69	phrog_506	341.0	0	transposase	integration and excision
UniRef90	UHGV-0079663_69	UniRef90_H3K9K4	544.0	0	IS605 OrfB family transposase	N/A
eggNOG-mapper	UHGV-0079663_69	1476973.JMMB01000007_gene2139	476.0	0	Helix-turn-helix domain	N/A
PADLOC	UHGV-0079663_69	Type_V_V_U4	147.8	0	Cas12	CRISPR-CAS
Pfam	UHGV-0079663_69	PF12323	N/A	N/A	Helix-turn-helix domain	HTH_OrfB_IS605
Pfam	UHGV-0079663_69	PF01385	N/A	N/A	Probable transposase	OrfB_IS605
Pfam	UHGV-0079663_69	PF07282	N/A	N/A	Putative transposase DNA-binding domain	OrfB_Zn_ribbon
NCBIFam	UHGV-0079663_69	NF040570.1	N/A	N/A	RNA-guided endonuclease TnpB family protein	N/A
COG	UHGV-0079663_69	COG0675	N/A	N/A	Transposase	N/A
structural_annotation	UHGV-0079663_69	PF07282,PF01385,NF038281,COG0675	N/A	N/A	N/A	N/A
Pfam	UHGV-0079663_71	PF04014	N/A	N/A	Antidote-toxin recognition MazE, bacterial antitoxin	MazE_antitoxin
structural_annotation	UHGV-0079663_71	MF_01193,NF007312,COG2336	N/A	N/A	N/A	N/A
PHROG	UHGV-0079663_73	phrog_2329	67.6	1.4e-19	N/A	unknown function
UniRef90	UHGV-0079663_73	UniRef90_UPI00130E00F9	85.9	5.26e-21	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	N/A
eggNOG-mapper	UHGV-0079663_73	469616.FMAG_01930	94.7	2.72e-25	N/A	N/A
structural_annotation	UHGV-0079663_73	PF04014,NF007312,COG2336	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0079663_74	PF09274	N/A	N/A	N/A	N/A
PHROG	UHGV-0079663_76	phrog_524	106.7	3.8e-31	anti-repressor Ant	transcription regulation
UniRef90	UHGV-0079663_76	UniRef90_D1ANB1	159.0	0	P22_AR_N domain-containing protein	N/A
eggNOG-mapper	UHGV-0079663_76	526218.Sterm_0815	159.0	0	Transposase (IS116 IS110 IS902 family)	N/A
Pfam	UHGV-0079663_76	PF10547	N/A	N/A	P22_AR N-terminal domain	P22_AR_N
COG	UHGV-0079663_76	COG3547	N/A	N/A	Transposase	N/A
PHROG	UHGV-0079663_77	phrog_620	143.1	1.69978e-42	ParB-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0079663_77	UniRef90_UPI0007E4626E	102.0	1.98e-24	ParB/Srx family N-terminal domain-containing protein	N/A
eggNOG-mapper	UHGV-0079663_77	469616.FMAG_01769	94.7	6.39e-22	ParB-like nuclease domain	N/A
PADLOC	UHGV-0079663_77	MTase_II_00015	54.1	0.0000000000000036	Type II methyltransferase	RM
Pfam	UHGV-0079663_77	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
COG	UHGV-0079663_77	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-0079663_77	PF02195,MF_02015,TIGR04285,COG1475	N/A	N/A	N/A	N/A
UniRef90	UHGV-0079663_78	UniRef90_UPI00195E0314	126.0	4.21e-31	phage terminase small subunit-related protein	N/A
Pfam	UHGV-0079663_78	PF10668	N/A	N/A	Phage terminase small subunit	Phage_terminase
Pfam	UHGV-0079663_78	PF13384	N/A	N/A	Homeodomain-like domain	HTH_23
COG	UHGV-0079663_78	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0079663_78	PF10668,NF040601,COG5484	N/A	N/A	N/A	N/A
PHROG	UHGV-0079663_79	phrog_2	83.0	2.6e-24	terminase large subunit	head and packaging
UniRef90	UHGV-0079663_79	UniRef90_A0A660RAK0	140.0	4.68e-34	Terminase B	N/A
eggNOG-mapper	UHGV-0079663_79	526218.Sterm_0853	261.0	0	tRNA N-acetyltransferase activity	N/A
COG	UHGV-0079663_79	COG1444	N/A	N/A	tRNA(Met) C34 N-acetyltransferase TmcA	N/A
structural_annotation	UHGV-0079663_79	PF04466,MF_04146,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0079663_80	phrog_314	46.3	0.00000000000083	homing endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0079663_80	UniRef90_A0A150MUV4	86.3	6.93e-17	GIY-YIG domain-containing protein	N/A
eggNOG-mapper	UHGV-0079663_80	1401067.HMPREF0872_00315	56.6	0.000000316	NUMOD3 motif (2 copies)	N/A
Pfam	UHGV-0079663_80	PF01541	N/A	N/A	GIY-YIG catalytic domain	GIY-YIG
Pfam	UHGV-0079663_80	PF07460	N/A	N/A	NUMOD3 motif	NUMOD3
NCBIFam	UHGV-0079663_80	TIGR01453.1	N/A	N/A	group I intron endonuclease	N/A
structural_annotation	UHGV-0079663_80	PF19835,PF07460,TIGR01453	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0079663_81	1536769.P40081_15255	73.2	0.00000000000113	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD	N/A
COG	UHGV-0079663_81	COG0507	N/A	N/A	ATPase/5'-3' helicase helicase subunit RecD of the DNA repair enzyme RecBCD (exonuclease V)	N/A
structural_annotation	UHGV-0079663_81	PF17289	N/A	N/A	N/A	N/A
PHROG	UHGV-0079663_82	phrog_12	123.6	1.2e-36	portal protein	head and packaging
UniRef90	UHGV-0079663_82	UniRef90_UPI001957C9AF	469.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-0079663_82	1122173.AXVL01000045_gene2102	160.0	6.45999e-42	Portal protein	N/A
Pfam	UHGV-0079663_82	PF04860	N/A	N/A	Phage portal protein	Phage_portal
COG	UHGV-0079663_82	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0079663_82	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-0079663_83	phrog_2468	80.2	2.9e-23	head morphogenesis	head and packaging
eggNOG-mapper	UHGV-0079663_83	457405.FSDG_01266	102.0	3.84e-23	cell adhesion	N/A
Pfam	UHGV-0079663_83	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
COG	UHGV-0079663_83	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0079663_83	PF06152,TIGR01641,COG2369	N/A	N/A	N/A	N/A
KOfam	UHGV-0079663_84	K06904	60.4	2.7e-17	N/A	N/A
PHROG	UHGV-0079663_84	phrog_10	143.5	2.29953e-42	major head protein	head and packaging
UniRef90	UHGV-0079663_84	UniRef90_UPI001959228D	552.0	0	phage major capsid protein	N/A
eggNOG-mapper	UHGV-0079663_84	575594.ACOH01000006_gene270	67.8	0.00000000425	Phage capsid family	N/A
Pfam	UHGV-0079663_84	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
Pfam	UHGV-0079663_84	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
Pfam	UHGV-0079663_84	PF02368	N/A	N/A	Bacterial Ig-like domain (group 2)	Big_2
NCBIFam	UHGV-0079663_84	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0079663_84	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0079663_84	PF05065,PF04586,PF02368,MF_04119,TIGR01554,TIGR01543,COG4653,COG3740	N/A	N/A	N/A	N/A
PHROG	UHGV-0079663_85	phrog_442	71.4	1.5e-20	head-tail adaptor	connector
structural_annotation	UHGV-0079663_85	TIGR02215	N/A	N/A	N/A	N/A
PHROG	UHGV-0079663_86	phrog_222	52.4	0.000000000000012	tail protein	tail
eggNOG-mapper	UHGV-0079663_86	1122173.AXVL01000045_gene2098	67.0	0.00000000000829	N/A	N/A
eggNOG-mapper	UHGV-0079663_87	1203606.HMPREF1526_00275	51.2	0.00000102	N/A	N/A
PHROG	UHGV-0079663_88	phrog_1232	44.4	0.0000000000018	N/A	unknown function
structural_annotation	UHGV-0079663_88	PF20765	N/A	N/A	N/A	N/A
PHROG	UHGV-0079663_91	phrog_2546	63.0	8.3e-18	N/A	unknown function
eggNOG-mapper	UHGV-0079663_91	1499683.CCFF01000014_gene3911	63.5	0.0000000000742	N/A	N/A
eggNOG-mapper	UHGV-0079663_92	469618.FVAG_02397	67.4	0.0000000000118	N/A	N/A
PHROG	UHGV-0079663_94	phrog_1533	248.7	0	tail length tape measure protein	tail
UniRef90	UHGV-0079663_94	UniRef90_UPI001958F872	464.0	0	phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-0079663_94	1337877.R9VW08_9CAUD	158.0	1.07e-37	N-acetylmuramoyl-L-alanine amidase activity	N/A
Pfam	UHGV-0079663_94	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
NCBIFam	UHGV-0079663_94	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
Pfam	UHGV-0079663_95	PF21821	N/A	N/A	Dit-like phage tail protein	Dit_like
PHROG	UHGV-0079663_97	phrog_1264	60.3	3.2e-17	N/A	unknown function
eggNOG-mapper	UHGV-0079663_97	525919.Apre_0851	60.1	0.00000000033	N/A	N/A
PHROG	UHGV-0079663_98	phrog_196	80.9	2.1e-23	virion structural protein	head and packaging
eggNOG-mapper	UHGV-0079663_98	230158.Q7Y5S8_9CAUD	56.2	0.00000216	N/A	N/A
structural_annotation	UHGV-0079663_98	PF05113,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-0079663_100	phrog_120	42.0	0.000000000016	baseplate protein	tail
PHROG	UHGV-0079663_101	phrog_6	118.0	1.1e-34	baseplate protein	tail
UniRef90	UHGV-0079663_101	UniRef90_UPI00195693DD	413.0	0	baseplate J/gp47 family protein	N/A
eggNOG-mapper	UHGV-0079663_101	596323.HMPREF0554_0818	122.0	1.08e-28	Baseplate J-like protein	N/A
Pfam	UHGV-0079663_101	PF04865	N/A	N/A	Baseplate J-like protein	Baseplate_J
COG	UHGV-0079663_101	COG3299	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0079663_101	PF04865,MF_04102,TIGR02243,COG3299	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0079663_102	PF11041,TIGR02242,COG4385	N/A	N/A	N/A	N/A
PHROG	UHGV-0079663_103	phrog_7037	104.1	2.1e-30	tail fiber protein	tail
eggNOG-mapper	UHGV-0079663_103	572544.Ilyop_1021	98.6	2.43e-21	cellulose 1,4-beta-cellobiosidase activity	N/A
COG	UHGV-0079663_103	COG5301	N/A	N/A	Phage-related tail fiber protein	N/A
structural_annotation	UHGV-0079663_103	PF12571	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0079663_104	469617.FUAG_03256	73.9	0.000000000000104	N/A	N/A