UHGV-0080908 (vOTU-064689)

Viral Genome: UHGV-0080908

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0080908
vOTU ID	vOTU-064689
Representative Genome?	Yes
Source	GPD
Original genome ID	uvig_160749
Associated BioSample	SAMEA3136636
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	91.64 (High-quality)
Trimmed provirus	No
CheckV viral markers	20
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9796
Virus hallmark genes (geNomad)	12
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	33.97
Jumbo phage	No

Genome content
Genome length (bp)	36,185
GC content	39.39%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	54
CDS density	92%
Average CDS length (bps)	615.06
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 91.64)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0080908_1	K01185	124.0	1.7e-36	E3.2.1.17; lysozyme [EC:3.2.1.17]	N/A
PHROG	UHGV-0080908_1	phrog_7	164.3	0	endolysin	lysis
UniRef90	UHGV-0080908_1	UniRef90_A0A1C5W0G4	222.0	0	Lysozyme	N/A
eggNOG-mapper	UHGV-0080908_1	1166130.H650_06900	114.0	1.16e-29	Phage lysozyme	N/A
Pfam	UHGV-0080908_1	PF00959	N/A	N/A	Phage lysozyme	Phage_lysozyme
Pfam	UHGV-0080908_1	PF08230	N/A	N/A	CW_7 repeat	CW_7
COG	UHGV-0080908_1	COG3772	N/A	N/A	Phage-related lysozyme (muramidase), GH24 family	N/A
HAMAP	UHGV-0080908_1	MF_04110	N/A	N/A	Endolysin	N/A
structural_annotation	UHGV-0080908_1	PF01471,PF00959,MF_04110,COG3772,COG3409	N/A	N/A	N/A	N/A
PHROG	UHGV-0080908_2	phrog_443	64.3	3.1e-18	holin	lysis
UniRef90	UHGV-0080908_2	UniRef90_A0A1I0HNR6	87.0	4.95e-21	Holin, r1t family	N/A
eggNOG-mapper	UHGV-0080908_2	397288.C806_00114	88.2	2.9e-22	Putative lactococcus lactis phage r1t holin	N/A
Pfam	UHGV-0080908_2	PF16945	N/A	N/A	Putative lactococcus lactis phage r1t holin	Phage_r1t_holin
structural_annotation	UHGV-0080908_2	PF16945	N/A	N/A	N/A	N/A
UniRef90	UHGV-0080908_3	UniRef90_A0A173RD60	154.0	0	Branched-chain amino acid ABC transporter permease	N/A
eggNOG-mapper	UHGV-0080908_3	742765.HMPREF9457_03364	151.0	0	N/A	N/A
structural_annotation	UHGV-0080908_4	PF03412	N/A	N/A	N/A	N/A
UniRef90	UHGV-0080908_5	UniRef90_A0A414S363	337.0	0	N/A	N/A
eggNOG-mapper	UHGV-0080908_5	1211817.CCAT010000008_gene929	184.0	0	N/A	N/A
structural_annotation	UHGV-0080908_5	PF10899	N/A	N/A	N/A	N/A
PHROG	UHGV-0080908_7	phrog_2232	170.2	0	N/A	unknown function
UniRef90	UHGV-0080908_7	UniRef90_A0A3E5GPI2	398.0	0	N/A	N/A
eggNOG-mapper	UHGV-0080908_7	1235802.C823_03705	211.0	0	N/A	N/A
Pfam	UHGV-0080908_7	PF14337	N/A	N/A	Abortive infection alpha	Abi_alpha
structural_annotation	UHGV-0080908_7	PF14337,TIGR03899	N/A	N/A	N/A	N/A
PHROG	UHGV-0080908_8	phrog_2310	45.3	0.00000000000088	N/A	unknown function
UniRef90	UHGV-0080908_9	UniRef90_UPI001D075611	255.0	0	GDSL-type esterase/lipase family protein	N/A
PHROG	UHGV-0080908_10	phrog_16164	263.2	0	N/A	unknown function
eggNOG-mapper	UHGV-0080908_10	33035.JPJF01000093_gene2236	62.0	0.00000000829	N/A	N/A
structural_annotation	UHGV-0080908_10	PF10651,NF032891	N/A	N/A	N/A	N/A
PHROG	UHGV-0080908_11	phrog_6616	610.5	0	tail protein	tail
UniRef90	UHGV-0080908_11	UniRef90_A0A1C5RZB4	355.0	0	Peptidase S74 domain-containing protein	N/A
eggNOG-mapper	UHGV-0080908_11	1121866.AUGK01000003_gene1439	245.0	0	Phage minor structural protein	N/A
COG	UHGV-0080908_11	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0080908_11	PF05113,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-0080908_12	phrog_1194	79.6	3.5e-23	N/A	unknown function
eggNOG-mapper	UHGV-0080908_12	33035.JPJF01000093_gene2242	158.0	0	N/A	N/A
structural_annotation	UHGV-0080908_12	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0080908_13	phrog_1535	382.8	0	tail length tape measure protein	tail
UniRef90	UHGV-0080908_13	UniRef90_A0A1C5RGR7	937.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0080908_13	33035.JPJF01000093_gene2243	890.0	0	phage tail tape measure protein	N/A
COG	UHGV-0080908_13	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-0080908_13	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0080908_14	phrog_8355	99.8	1.1e-29	N/A	unknown function
UniRef90	UHGV-0080908_14	UniRef90_UPI001C10E2B7	204.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-0080908_14	483218.BACPEC_01147	86.3	6.69e-21	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0080908_14	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0080908_14	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0080908_15	phrog_8300	81.1	1.2e-23	N/A	unknown function
eggNOG-mapper	UHGV-0080908_15	483218.BACPEC_01148	63.5	0.0000000000101	N/A	N/A
structural_annotation	UHGV-0080908_15	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0080908_16	phrog_820	104.6	7.6e-31	major tail protein	tail
eggNOG-mapper	UHGV-0080908_16	33035.JPJF01000093_gene2246	195.0	0	N/A	N/A
structural_annotation	UHGV-0080908_16	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0080908_17	phrog_2595	92.8	2.9e-27	head-tail connector protein	connector
UniRef90	UHGV-0080908_17	UniRef90_UPI001C10E28D	256.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0080908_17	483218.BACPEC_01150	130.0	3.36e-37	N/A	N/A
Pfam	UHGV-0080908_17	PF12691	N/A	N/A	Bacteriophage minor capsid protein	Minor_capsid_3
structural_annotation	UHGV-0080908_17	PF12691,COG5003	N/A	N/A	N/A	N/A
PHROG	UHGV-0080908_18	phrog_556	57.0	3e-16	minor head protein	head and packaging
eggNOG-mapper	UHGV-0080908_18	742740.HMPREF9474_03509	159.0	0	N/A	N/A
PHROG	UHGV-0080908_19	phrog_8710	145.8	9.80909e-44	N/A	unknown function
eggNOG-mapper	UHGV-0080908_19	742740.HMPREF9474_03508	147.0	2.10195e-44	N/A	N/A
structural_annotation	UHGV-0080908_19	PF10665,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0080908_20	phrog_541	94.8	7.4e-28	head-tail adaptor	connector
eggNOG-mapper	UHGV-0080908_20	742740.HMPREF9474_03507	200.0	0	N/A	N/A
PHROG	UHGV-0080908_21	phrog_422	281.3	0	major head protein	head and packaging
UniRef90	UHGV-0080908_21	UniRef90_A0A414EG86	600.0	0	Phage capsid protein	N/A
eggNOG-mapper	UHGV-0080908_21	663278.Ethha_1589	394.0	0	N/A	N/A
structural_annotation	UHGV-0080908_21	PF19821,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0080908_22	phrog_2303	147.0	1.20512e-43	head scaffolding protein	head and packaging
eggNOG-mapper	UHGV-0080908_22	742740.HMPREF9474_03504	193.0	0	N/A	N/A
PHROG	UHGV-0080908_24	phrog_478	126.8	9.3e-38	site-specific recombination directionality factor RDF	integration and excision
UniRef90	UHGV-0080908_24	UniRef90_A0A285PT53	236.0	0	Prokaryotic membrane lipoprotein lipid attachment site profile	N/A
eggNOG-mapper	UHGV-0080908_24	1235792.C808_00058	192.0	0	N/A	N/A
PHROG	UHGV-0080908_25	phrog_918	134.5	2.1e-40	N/A	unknown function
UniRef90	UHGV-0080908_25	UniRef90_UPI00115A7D93	142.0	2.19023e-42	N/A	N/A
eggNOG-mapper	UHGV-0080908_25	632112.C1KFI4_9CAUD	131.0	2.29e-38	N/A	N/A
Pfam	UHGV-0080908_25	PF19791	N/A	N/A	N/A	DUF6275
structural_annotation	UHGV-0080908_25	PF19791	N/A	N/A	N/A	N/A
PHROG	UHGV-0080908_26	phrog_355	60.4	3.1e-17	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0080908_26	UniRef90_UPI001648737F	193.0	0	N/A	N/A
eggNOG-mapper	UHGV-0080908_26	1256908.HMPREF0373_00479	145.0	3.78351e-44	N/A	N/A
Pfam	UHGV-0080908_26	PF14359	N/A	N/A	N/A	DUF4406
structural_annotation	UHGV-0080908_26	PF14359	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0080908_27	PF11344	N/A	N/A	N/A	N/A
KOfam	UHGV-0080908_28	K20478	46.5	0.000000000000083	GOLGB1; golgin subfamily B member 1	N/A
PHROG	UHGV-0080908_28	phrog_581	244.8	0	minor head protein	head and packaging
UniRef90	UHGV-0080908_28	UniRef90_UPI001C0F53DF	870.0	0	phage minor capsid protein	N/A
eggNOG-mapper	UHGV-0080908_28	33035.JPJF01000093_gene2255	457.0	0	N/A	N/A
Pfam	UHGV-0080908_28	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0080908_28	COG5585	N/A	N/A	Putative phage head morphogenesis protein, F of phage Mu or gp7 of SPP1	N/A
PHROG	UHGV-0080908_30	phrog_25639	136.4	4.30002e-41	N/A	unknown function
eggNOG-mapper	UHGV-0080908_30	742740.HMPREF9474_03502	110.0	7.8e-31	N/A	N/A
PHROG	UHGV-0080908_31	phrog_533	298.0	0	portal protein	head and packaging
UniRef90	UHGV-0080908_31	UniRef90_A0A1C5YZW6	975.0	0	Phage portal protein, putative, A118 family	N/A
eggNOG-mapper	UHGV-0080908_31	742740.HMPREF9474_03501	716.0	0	N/A	N/A
structural_annotation	UHGV-0080908_31	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0080908_32	K06909	87.7	1.5e-25	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0080908_32	phrog_2	71.1	2.3e-20	terminase large subunit	head and packaging
UniRef90	UHGV-0080908_32	UniRef90_A0A415L5G2	874.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0080908_32	1304866.K413DRAFT_0811	765.0	0	Phage terminase, large subunit, PBSX family	N/A
COG	UHGV-0080908_32	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0080908_32	PF03237,PF17289,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
KOfam	UHGV-0080908_33	K07474	138.3	9.49996e-41	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-0080908_33	phrog_51	152.2	2.8026e-45	terminase small subunit	head and packaging
UniRef90	UHGV-0080908_33	UniRef90_UPI001C110B24	309.0	0	terminase small subunit	N/A
eggNOG-mapper	UHGV-0080908_33	1298920.KI911353_gene4857	202.0	0	Terminase small subunit	N/A
Pfam	UHGV-0080908_33	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-0080908_33	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0080908_33	PF03592,COG3728	N/A	N/A	N/A	N/A
PHROG	UHGV-0080908_34	phrog_36	67.0	2.9e-19	transcriptional regulator	transcription regulation
UniRef90	UHGV-0080908_34	UniRef90_R6ZAS5	119.0	3.93e-31	GED domain-containing protein	N/A
eggNOG-mapper	UHGV-0080908_34	411490.ANACAC_00789	139.0	7.13e-40	N/A	N/A
PHROG	UHGV-0080908_35	phrog_6568	68.1	9.5e-20	N/A	unknown function
eggNOG-mapper	UHGV-0080908_36	665950.HMPREF1025_02540	54.3	0.000000118	N/A	N/A
PHROG	UHGV-0080908_38	phrog_8538	92.8	2.7e-27	N/A	unknown function
eggNOG-mapper	UHGV-0080908_38	1121121.KB894312_gene3170	76.6	5.75e-16	N/A	N/A
UniRef90	UHGV-0080908_40	UniRef90_UPI00192387A0	74.3	0.0000000000000145	N/A	N/A
eggNOG-mapper	UHGV-0080908_40	478749.BRYFOR_07594	53.9	0.000000429	N/A	N/A
PHROG	UHGV-0080908_41	phrog_7566	115.6	1.6e-34	N/A	unknown function
eggNOG-mapper	UHGV-0080908_41	411459.RUMOBE_00948	113.0	5.61e-31	N/A	N/A
PHROG	UHGV-0080908_42	phrog_15077	101.1	6.4e-30	N/A	unknown function
UniRef90	UHGV-0080908_42	UniRef90_A5ZPN2	158.0	1.52999e-40	N/A	N/A
eggNOG-mapper	UHGV-0080908_42	97139.C824_00038	214.0	0	N/A	N/A
structural_annotation	UHGV-0080908_42	PF11300,NF033725	N/A	N/A	N/A	N/A
PHROG	UHGV-0080908_43	phrog_8470	237.9	0	N/A	unknown function
UniRef90	UHGV-0080908_43	UniRef90_UPI001C10724F	1187.0	0	PcfJ domain-containing protein	N/A
eggNOG-mapper	UHGV-0080908_43	999413.HMPREF1094_04705	516.0	0	PcfJ-like protein	N/A
Pfam	UHGV-0080908_43	PF14284	N/A	N/A	PcfJ-like protein	PcfJ
structural_annotation	UHGV-0080908_43	PF14284	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0080908_44	411459.RUMOBE_00951	207.0	0	N/A	N/A
KOfam	UHGV-0080908_45	K03469	57.3	3.4e-16	rnhA, RNASEH1; ribonuclease HI [EC:3.1.26.4]	N/A
PHROG	UHGV-0080908_45	phrog_531	54.8	0.0000000000000018	Rnase H	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0080908_45	UniRef90_A0A174KC84	261.0	0	Ribonuclease H	N/A
eggNOG-mapper	UHGV-0080908_45	411461.DORFOR_01140	112.0	7.24e-30	RNA-DNA hybrid ribonuclease activity	N/A
Pfam	UHGV-0080908_45	PF00075	N/A	N/A	RNase H	RNase_H
COG	UHGV-0080908_45	COG0328	N/A	N/A	Ribonuclease HI	N/A
structural_annotation	UHGV-0080908_45	PF00075,MF_00042,NF001236,COG0328	N/A	N/A	N/A	N/A
PHROG	UHGV-0080908_46	phrog_3584	160.0	0	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0080908_46	1235792.C808_03084	249.0	0	N/A	N/A
structural_annotation	UHGV-0080908_46	PF01446	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0080908_47	PF10922	N/A	N/A	N/A	N/A
UniRef90	UHGV-0080908_48	UniRef90_A0A415G6W5	181.0	0	Winged helix-turn-helix domain-containing protein	N/A
structural_annotation	UHGV-0080908_48	PF20063	N/A	N/A	N/A	N/A
UniRef90	UHGV-0080908_52	UniRef90_A0A416GY85	99.8	4.13e-26	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0080908_52	1347392.CCEZ01000005_gene1206	53.9	0.00000000896	N/A	N/A
structural_annotation	UHGV-0080908_52	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0080908_53	K07727	43.7	0.0000000000068	K07727; putative transcriptional regulator	N/A
PHROG	UHGV-0080908_53	phrog_8	40.1	0.000000000081	transcriptional regulator	transcription regulation
UniRef90	UHGV-0080908_53	UniRef90_A0A173Z9V2	179.0	0	Helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0080908_53	1256908.HMPREF0373_00219	72.0	0.00000000000000532	sequence-specific DNA binding	N/A
Pfam	UHGV-0080908_53	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
COG	UHGV-0080908_53	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0080908_53	PF12844,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0080908_54	phrog_87	80.6	1.6e-23	metallo-protease	other
UniRef90	UHGV-0080908_54	UniRef90_UPI001C03919B	218.0	0	ImmA/IrrE family metallo-endopeptidase	N/A
eggNOG-mapper	UHGV-0080908_54	1347392.CCEZ01000005_gene1204	177.0	0	Zn peptidase	N/A
Pfam	UHGV-0080908_54	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
COG	UHGV-0080908_54	COG2856	N/A	N/A	Zn-dependent peptidase ImmA, M78 family	N/A
structural_annotation	UHGV-0080908_54	PF06114,COG2856	N/A	N/A	N/A	N/A