UHGV-0081356 (vOTU-124801)

Viral Genome: UHGV-0081356

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0081356
vOTU ID	vOTU-124801
Representative Genome?	Yes
Source	GPD
Original genome ID	uvig_149628
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	52.62 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	9
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9727
Virus hallmark genes (geNomad)	4
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	31.27
Jumbo phage	No

Genome content
Genome length (bp)	22,115
GC content	43.35%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	35
CDS density	90%
Average CDS length (bps)	567.43
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 52.62)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0081356_2	phrog_15239	79.3	3.7e-23	N/A	unknown function
eggNOG-mapper	UHGV-0081356_2	1449126.JQKL01000003_gene1694	54.7	0.0000000535	N/A	N/A
PHROG	UHGV-0081356_3	phrog_1357	252.9	0	major head protein	head and packaging
UniRef90	UHGV-0081356_3	UniRef90_A0A8D9UH64	595.0	0	Major capsid protein	N/A
eggNOG-mapper	UHGV-0081356_3	1449126.JQKL01000003_gene1695	435.0	0	N/A	N/A
Pfam	UHGV-0081356_3	PF13252	N/A	N/A	N/A	DUF4043
NCBIFam	UHGV-0081356_3	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-0081356_3	PF13252,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0081356_4	phrog_13908	318.9	0	N/A	unknown function
UniRef90	UHGV-0081356_4	UniRef90_A0A844DRV7	129.0	3.92e-30	Ribosomal-processing cysteine protease Prp	N/A
eggNOG-mapper	UHGV-0081356_4	1203606.HMPREF1526_02747	56.2	0.00000231	N/A	N/A
UniRef90	UHGV-0081356_5	UniRef90_UPI001D021C93	76.3	6.47e-16	ribosomal-processing cysteine protease Prp	N/A
Pfam	UHGV-0081356_5	PF04327	N/A	N/A	Cysteine protease Prp	Peptidase_Prp
structural_annotation	UHGV-0081356_5	NF011128,COG2868	N/A	N/A	N/A	N/A
PHROG	UHGV-0081356_6	phrog_156	340.5	0	portal protein	head and packaging
UniRef90	UHGV-0081356_6	UniRef90_A0A8D9UH10	803.0	0	Portal protein	N/A
eggNOG-mapper	UHGV-0081356_6	748224.HMPREF9436_01396	531.0	0	N/A	N/A
structural_annotation	UHGV-0081356_6	PF16510,MF_04120,TIGR01538,COG4383	N/A	N/A	N/A	N/A
KOfam	UHGV-0081356_7	K06909	115.1	7.7e-34	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0081356_7	phrog_979	205.8	0	terminase large subunit	head and packaging
UniRef90	UHGV-0081356_7	UniRef90_A0A3D1LE76	840.0	0	Terminase-like family protein	N/A
eggNOG-mapper	UHGV-0081356_7	657322.FPR_02290	654.0	0	Terminase-like family	N/A
Pfam	UHGV-0081356_7	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-0081356_7	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0081356_7	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0081356_8	phrog_309	113.7	1.1e-33	terminase small subunit	head and packaging
UniRef90	UHGV-0081356_8	UniRef90_UPI001BB47C01	197.0	0	transposase	N/A
eggNOG-mapper	UHGV-0081356_8	1196323.ALKF01000117_gene4957	104.0	5.08e-26	transposase activity	N/A
COG	UHGV-0081356_8	COG2963	N/A	N/A	Transposase InsE and inactivated derivatives	N/A
structural_annotation	UHGV-0081356_8	PF07141	N/A	N/A	N/A	N/A
UniRef90	UHGV-0081356_9	UniRef90_A0A1Q9J4Y8	62.4	0.00000000292	HTH cro/C1-type domain-containing protein	N/A
PHROG	UHGV-0081356_10	phrog_25567	47.6	0.00000000000025	N/A	unknown function
UniRef90	UHGV-0081356_10	UniRef90_A0A416AUE8	48.5	0.00000831	Helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0081356_10	658088.HMPREF0987_01000	47.0	0.00000588	Helix-turn-helix	N/A
COG	UHGV-0081356_10	COG2944	N/A	N/A	DNA-binding transcriptional regulator YiaG, XRE-type HTH domain	N/A
PHROG	UHGV-0081356_11	phrog_17690	118.0	4.2e-35	N/A	unknown function
UniRef90	UHGV-0081356_11	UniRef90_A0A6L5XWF4	133.0	1.17e-37	3-dehydroquinate synthase	N/A
eggNOG-mapper	UHGV-0081356_11	33035.JPJF01000123_gene2433	140.0	1.90997e-41	N/A	N/A
PHROG	UHGV-0081356_13	phrog_599	44.9	0.0000000000023	Lar-like restriction alleviation protein	moron, auxiliary metabolic gene and host takeover
Pfam	UHGV-0081356_13	PF14354	N/A	N/A	Restriction alleviation protein Lar	Lar_restr_allev
structural_annotation	UHGV-0081356_13	PF14354,TIGR03655	N/A	N/A	N/A	N/A
KOfam	UHGV-0081356_14	K01160	48.4	0.00000000000027	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-0081356_14	phrog_4632	48.6	0.0000000000000057	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0081356_14	UniRef90_A0A7X8IB41	150.0	1.54143e-44	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-0081356_14	556263.FSEG_00477	59.3	0.0000000013	N/A	N/A
structural_annotation	UHGV-0081356_14	PF19595,NF007305,COG4570	N/A	N/A	N/A	N/A
KOfam	UHGV-0081356_15	K02315	136.7	2.5e-40	dnaC; DNA replication protein DnaC	N/A
PHROG	UHGV-0081356_15	phrog_50	133.0	2.7e-39	DnaC-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0081356_15	UniRef90_A0A3D0LZW1	229.0	0	Bac_DnaA domain-containing protein	N/A
eggNOG-mapper	UHGV-0081356_15	445972.ANACOL_01829	224.0	0	N/A	N/A
Pfam	UHGV-0081356_15	PF00308	N/A	N/A	Bacterial dnaA protein	Bac_DnaA
COG	UHGV-0081356_15	COG1484	N/A	N/A	DNA replication protein DnaC	N/A
structural_annotation	UHGV-0081356_15	PF01695,MF_00377,NF005378,COG1484	N/A	N/A	N/A	N/A
PHROG	UHGV-0081356_16	phrog_15768	154.0	1.4013e-45	N/A	unknown function
UniRef90	UHGV-0081356_16	UniRef90_UPI000750A730	133.0	1.16e-34	N/A	N/A
eggNOG-mapper	UHGV-0081356_16	888059.HMPREF9071_2112	100.0	7.1e-23	N/A	N/A
AcrCatalog	UHGV-0081356_16	cluster_38323	95.1	1.28e-25	NA	N/A
Pfam	UHGV-0081356_16	PF19808	N/A	N/A	N/A	DUF6291
structural_annotation	UHGV-0081356_16	PF19808	N/A	N/A	N/A	N/A
KOfam	UHGV-0081356_17	K03111	130.1	2.8e-38	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0081356_17	phrog_44	133.7	1.2e-39	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0081356_17	UniRef90_A0A136WI26	160.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0081356_17	97138.C820_02339	144.0	1.42932e-42	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-0081356_17	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0081356_17	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0081356_17	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0081356_17	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0081356_17	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
KOfam	UHGV-0081356_18	K07455	175.1	0	recT; recombination protein RecT	N/A
PHROG	UHGV-0081356_18	phrog_148	180.9	0	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0081356_18	UniRef90_UPI000F05C9E1	356.0	0	recombinase RecT	N/A
eggNOG-mapper	UHGV-0081356_18	1591072.A0A0B5CTU3_9CAUD	214.0	0	DNA metabolic process	N/A
Pfam	UHGV-0081356_18	PF03837	N/A	N/A	RecT family	RecT
NCBIFam	UHGV-0081356_18	TIGR00616.1	N/A	N/A	recombinase, phage RecT family	N/A
PHROG	UHGV-0081356_19	phrog_434	292.1	0	RecE-like recombination exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0081356_19	UniRef90_UPI001D078B74	356.0	0	YqaJ viral recombinase family protein	N/A
eggNOG-mapper	UHGV-0081356_19	428125.CLOLEP_01823	345.0	0	YqaJ viral recombinase family	N/A
Pfam	UHGV-0081356_19	PF09588	N/A	N/A	YqaJ-like viral recombinase domain	YqaJ
NCBIFam	UHGV-0081356_19	TIGR03033.1	N/A	N/A	putative phage-type endonuclease	N/A
COG	UHGV-0081356_19	COG5377	N/A	N/A	Phage-related protein, predicted endonuclease	N/A
structural_annotation	UHGV-0081356_19	PF09588,MF_03030,TIGR03033,COG5377	N/A	N/A	N/A	N/A
UniRef90	UHGV-0081356_21	UniRef90_A0A1Y4L2U8	58.9	0.00000000271	N/A	N/A
Pfam	UHGV-0081356_21	PF04448	N/A	N/A	N/A	DUF551
structural_annotation	UHGV-0081356_21	PF04448,NF041588	N/A	N/A	N/A	N/A
PHROG	UHGV-0081356_22	phrog_757	191.8	0	DNA methyltransferase	other
UniRef90	UHGV-0081356_22	UniRef90_A0A355KVL2	360.0	0	DNA cytosine methyltransferase	N/A
eggNOG-mapper	UHGV-0081356_22	748224.HMPREF9436_03069	371.0	0	DNA (cytosine-5-)-methyltransferase activity	N/A
COG	UHGV-0081356_22	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-0081356_22	PF00145,TIGR00675,COG0270	N/A	N/A	N/A	N/A
PHROG	UHGV-0081356_26	phrog_2967	41.1	0.000000000031	transcriptional regulator	transcription regulation
Pfam	UHGV-0081356_26	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
COG	UHGV-0081356_26	COG2390	N/A	N/A	DNA-binding transcriptional regulator LsrR, DeoR family	N/A
KOfam	UHGV-0081356_27	K22300	79.4	7e-23	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0081356_27	phrog_8	60.4	4.6e-17	transcriptional regulator	transcription regulation
UniRef90	UHGV-0081356_27	UniRef90_UPI000F0D19B9	72.4	0.00000000000000192	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0081356_27	1203606.HMPREF1526_01856	63.5	0.0000000000269	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0081356_27	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0081356_27	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0081356_27	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
UniRef90	UHGV-0081356_28	UniRef90_A0A353IZ94	91.3	6.66e-22	XRE family transcriptional regulator (Fragment)	N/A
eggNOG-mapper	UHGV-0081356_28	1235802.C823_04750	83.6	1.5e-19	Helix-turn-helix XRE-family like proteins	N/A
COG	UHGV-0081356_28	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
PHROG	UHGV-0081356_29	phrog_87	102.6	2.5e-30	metallo-protease	other
UniRef90	UHGV-0081356_29	UniRef90_A0A0X8VBL4	146.0	1.32983e-42	Metallopeptidase ImmA	N/A
eggNOG-mapper	UHGV-0081356_29	1235802.C823_04751	137.0	1.19e-39	IrrE N-terminal-like domain	N/A
Pfam	UHGV-0081356_29	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
COG	UHGV-0081356_29	COG2856	N/A	N/A	Zn-dependent peptidase ImmA, M78 family	N/A
structural_annotation	UHGV-0081356_29	PF06114,COG2856	N/A	N/A	N/A	N/A
KOfam	UHGV-0081356_31	K14059	214.8	0	int; integrase	N/A
PHROG	UHGV-0081356_31	phrog_1	188.3	0	integrase	integration and excision
UniRef90	UHGV-0081356_31	UniRef90_A0A353J242	215.0	0	Site-specific integrase	N/A
eggNOG-mapper	UHGV-0081356_31	1226322.HMPREF1545_00144	191.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0081356_31	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-0081356_31	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0081356_31	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0081356_31	PF00589,PF12167,MF_02055,NF040815,COG4974	N/A	N/A	N/A	N/A
KOfam	UHGV-0081356_32	K11062	138.4	5.29999e-41	entD; probable enterotoxin D	N/A
PHROG	UHGV-0081356_32	phrog_670	143.8	1.49939e-42	endolysin	lysis
UniRef90	UHGV-0081356_32	UniRef90_N1ZHY5	211.0	0	N-acetylmuramoyl-L-alanine amidase domain-containing protein	N/A
eggNOG-mapper	UHGV-0081356_32	97138.C820_00251	211.0	0	Ami_2	N/A
Pfam	UHGV-0081356_32	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
COG	UHGV-0081356_32	COG3023	N/A	N/A	N-acetyl-anhydromuramyl-L-alanine amidase AmpD	N/A
structural_annotation	UHGV-0081356_32	PF01510,MF_04111,NF008758,COG5632	N/A	N/A	N/A	N/A
PHROG	UHGV-0081356_33	phrog_1129	67.1	2e-19	holin	lysis
UniRef90	UHGV-0081356_33	UniRef90_UPI001C1096AE	131.0	3.76e-38	phage holin family protein	N/A
eggNOG-mapper	UHGV-0081356_33	702450.CUW_0551	103.0	3.95e-28	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-0081356_33	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0081356_33	PF06946	N/A	N/A	N/A	N/A
PHROG	UHGV-0081356_34	phrog_937	69.3	5.7e-20	hemolysin	other
eggNOG-mapper	UHGV-0081356_34	1297617.JPJD01000099_gene2176	48.9	0.00000557	N/A	N/A