UHGV-0083100 (vOTU-033994)

Viral Genome: UHGV-0083100

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0083100
vOTU ID	vOTU-033994
Representative Genome?	Yes
Source	GPD
Original genome ID	uvig_147713
Associated BioSample	SAMEA2737713
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	88.47 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	19
CheckV host markers	1
Recoded stop codon	No

Viral Content
geNomad score	0.9736
Virus hallmark genes (geNomad)	8
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	21.64
Jumbo phage	No

Genome content
Genome length (bp)	37,798
GC content	42.77%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	53
CDS density	89%
Average CDS length (bps)	636.40
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 88.47)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0083100_1	K06400	286.9	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-0083100_1	phrog_95	311.6	0	integrase	integration and excision
UniRef90	UHGV-0083100_1	UniRef90_A0A415FHQ5	967.0	0	Recombinase family protein	N/A
eggNOG-mapper	UHGV-0083100_1	33035.JPJF01000109_gene439	643.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-0083100_1	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-0083100_1	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-0083100_1	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-0083100_1	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0083100_1	PF07508,PF00239,NF041201,COG1961	N/A	N/A	N/A	N/A
PHROG	UHGV-0083100_2	phrog_1847	460.3	0	N/A	unknown function
UniRef90	UHGV-0083100_2	UniRef90_UPI00156E489C	802.0	0	N/A	N/A
eggNOG-mapper	UHGV-0083100_2	608534.GCWU000341_02322	383.0	0	T5orf172	N/A
Pfam	UHGV-0083100_2	PF13250	N/A	N/A	N/A	DUF4041
Pfam	UHGV-0083100_2	PF13455	N/A	N/A	Meiotically up-regulated gene 113	MUG113
COG	UHGV-0083100_2	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
structural_annotation	UHGV-0083100_2	PF13250,PF19824,MF_01506	N/A	N/A	N/A	N/A
PHROG	UHGV-0083100_3	phrog_87	85.9	3.6e-25	metallo-protease	other
UniRef90	UHGV-0083100_3	UniRef90_UPI001D07A9BA	213.0	0	ImmA/IrrE family metallo-endopeptidase	N/A
eggNOG-mapper	UHGV-0083100_3	457412.RSAG_00798	206.0	0	Zn peptidase	N/A
Pfam	UHGV-0083100_3	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
COG	UHGV-0083100_3	COG2856	N/A	N/A	Zn-dependent peptidase ImmA, M78 family	N/A
structural_annotation	UHGV-0083100_3	PF06114,COG2856	N/A	N/A	N/A	N/A
PHROG	UHGV-0083100_4	phrog_37898	137.9	2.29995e-41	N/A	unknown function
UniRef90	UHGV-0083100_4	UniRef90_A0A416QWX7	198.0	0	N/A	N/A
eggNOG-mapper	UHGV-0083100_4	877414.ATWA01000082_gene1189	105.0	1.58e-28	N/A	N/A
Pfam	UHGV-0083100_4	PF10387	N/A	N/A	N/A	DUF2442
structural_annotation	UHGV-0083100_4	PF10387	N/A	N/A	N/A	N/A
PHROG	UHGV-0083100_5	phrog_14333	100.4	1.2e-29	N/A	unknown function
UniRef90	UHGV-0083100_5	UniRef90_UPI001C0F7873	147.0	1.12104e-44	N/A	N/A
eggNOG-mapper	UHGV-0083100_5	1124982.MSI_07850	147.0	4.2039e-45	N/A	N/A
Pfam	UHGV-0083100_5	PF13711	N/A	N/A	N/A	DUF4160
structural_annotation	UHGV-0083100_5	PF13711	N/A	N/A	N/A	N/A
KOfam	UHGV-0083100_6	K22300	61.0	2.7e-17	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0083100_6	phrog_2967	73.9	2.1e-21	transcriptional regulator	transcription regulation
UniRef90	UHGV-0083100_6	UniRef90_A0A1G5F4H5	188.0	0	Transcriptional regulator, contains XRE-family HTH domain	N/A
eggNOG-mapper	UHGV-0083100_6	457412.RSAG_00795	170.0	0	sequence-specific DNA binding	N/A
Pfam	UHGV-0083100_6	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0083100_6	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0083100_6	PF12844,MF_00535,NF007257,COG3655	N/A	N/A	N/A	N/A
UniRef90	UHGV-0083100_7	UniRef90_A0A373P458	124.0	6.99e-36	N/A	N/A
eggNOG-mapper	UHGV-0083100_7	626523.GCWU000342_01049	71.2	0.0000000000000012	N/A	N/A
Pfam	UHGV-0083100_7	PF05339	N/A	N/A	N/A	DUF739
COG	UHGV-0083100_7	COG3655	N/A	N/A	DNA-binding transcriptional regulator, XRE family	N/A
structural_annotation	UHGV-0083100_7	PF05339,NF002773,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0083100_9	phrog_9607	64.8	1.6e-18	N/A	unknown function
eggNOG-mapper	UHGV-0083100_9	1378168.N510_03161	197.0	0	N/A	N/A
structural_annotation	UHGV-0083100_9	PF02883,MF_00791,NF012200,COG3354	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0083100_14	PF16826	N/A	N/A	N/A	N/A
PHROG	UHGV-0083100_15	phrog_3584	153.3	1.4013e-45	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0083100_15	1280698.AUJS01000007_gene1013	332.0	0	N/A	N/A
structural_annotation	UHGV-0083100_15	PF01446	N/A	N/A	N/A	N/A
PHROG	UHGV-0083100_16	phrog_531	46.2	0.0000000000008	Rnase H	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0083100_16	UniRef90_A0A564VJZ8	336.0	0	Ribonuclease H	N/A
eggNOG-mapper	UHGV-0083100_16	411461.DORFOR_01140	107.0	1.66e-27	RNA-DNA hybrid ribonuclease activity	N/A
COG	UHGV-0083100_16	COG0328	N/A	N/A	Ribonuclease HI	N/A
structural_annotation	UHGV-0083100_16	PF00075,MF_00042,NF001236,COG0328	N/A	N/A	N/A	N/A
KOfam	UHGV-0083100_18	K03496	195.9	0	parA, soj; chromosome partitioning protein	N/A
PHROG	UHGV-0083100_18	phrog_164	161.8	0	ParA-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0083100_18	UniRef90_A0A1C5VK85	471.0	0	Sporulation initiation inhibitor protein soj	N/A
eggNOG-mapper	UHGV-0083100_18	97139.C824_00725	266.0	0	Cellulose biosynthesis protein BcsQ	N/A
Pfam	UHGV-0083100_18	PF13614	N/A	N/A	AAA domain	AAA_31
COG	UHGV-0083100_18	COG1192	N/A	N/A	ParA-like ATPase involved in chromosome/plasmid partitioning or cellulose biosynthesis protein BcsQ	N/A
structural_annotation	UHGV-0083100_18	PF13614,MF_00533,TIGR03453,COG1192	N/A	N/A	N/A	N/A
KOfam	UHGV-0083100_19	K03497	44.5	0.0000000000026	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	N/A
PHROG	UHGV-0083100_19	phrog_15077	149.4	4.76441e-44	N/A	unknown function
UniRef90	UHGV-0083100_19	UniRef90_UPI00156ECBCA	1166.0	0	ParB/RepB/Spo0J family partition protein	N/A
eggNOG-mapper	UHGV-0083100_19	1235792.C808_00610	181.0	0	ParB-like nuclease domain	N/A
Pfam	UHGV-0083100_19	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
COG	UHGV-0083100_19	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-0083100_19	PF02195,MF_02015,TIGR04285,COG1475	N/A	N/A	N/A	N/A
PHROG	UHGV-0083100_20	phrog_7566	101.2	4.6e-30	N/A	unknown function
eggNOG-mapper	UHGV-0083100_20	1304866.K413DRAFT_1198	76.6	1.92e-16	N/A	N/A
PHROG	UHGV-0083100_23	phrog_23707	67.2	2.7e-19	N/A	unknown function
UniRef90	UHGV-0083100_23	UniRef90_A0A415FLQ6	170.0	0	Alanine racemase	N/A
eggNOG-mapper	UHGV-0083100_23	411483.FAEPRAA2165_01889	61.6	0.000000000193	N/A	N/A
PHROG	UHGV-0083100_25	phrog_6568	59.3	5.4e-17	N/A	unknown function
PHROG	UHGV-0083100_26	phrog_36	70.6	2.7e-20	transcriptional regulator	transcription regulation
UniRef90	UHGV-0083100_26	UniRef90_UPI001D089637	185.0	0	N/A	N/A
eggNOG-mapper	UHGV-0083100_26	33035.JPJF01000139_gene3002	176.0	0	N/A	N/A
structural_annotation	UHGV-0083100_26	PF04545	N/A	N/A	N/A	N/A
PHROG	UHGV-0083100_27	phrog_10865	157.8	0	N/A	unknown function
eggNOG-mapper	UHGV-0083100_27	1031288.AXAA01000022_gene1578	146.0	5.53e-39	N/A	N/A
Pfam	UHGV-0083100_27	PF20505	N/A	N/A	N/A	DUF6731
structural_annotation	UHGV-0083100_27	PF20505,NF001463	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0083100_28	748449.Halha_2167	63.9	0.000000000448	N/A	N/A
structural_annotation	UHGV-0083100_28	PF15968	N/A	N/A	N/A	N/A
PHROG	UHGV-0083100_29	phrog_1889	209.9	0	terminase small subunit	head and packaging
UniRef90	UHGV-0083100_29	UniRef90_A0A564VY60	468.0	0	ATPase subunit of terminase (GpP-like)	N/A
eggNOG-mapper	UHGV-0083100_29	33035.JPJF01000107_gene435	249.0	0	N/A	N/A
Pfam	UHGV-0083100_29	PF06056	N/A	N/A	Putative ATPase subunit of terminase (gpP-like)	Terminase_5
NCBIFam	UHGV-0083100_29	NF040601.1	N/A	N/A	phage terminase small subunit	N/A
COG	UHGV-0083100_29	COG5484	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0083100_29	PF06056,NF040601,COG5484	N/A	N/A	N/A	N/A
KOfam	UHGV-0083100_30	K06909	148.5	5.74532e-44	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0083100_30	phrog_10250	222.4	0	N/A	unknown function
UniRef90	UHGV-0083100_30	UniRef90_A0A1G5F2L0	938.0	0	Phage terminase, large subunit, PBSX family	N/A
eggNOG-mapper	UHGV-0083100_30	903814.ELI_3215	652.0	0	Phage terminase large subunit	N/A
Pfam	UHGV-0083100_30	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
NCBIFam	UHGV-0083100_30	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0083100_30	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0083100_30	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0083100_31	phrog_64	400.8	0	portal protein	head and packaging
UniRef90	UHGV-0083100_31	UniRef90_A0A1G5F2B6	890.0	0	Phage portal protein, SPP1 family	N/A
eggNOG-mapper	UHGV-0083100_31	742733.HMPREF9469_01826	608.0	0	Phage portal protein, SPP1 family	N/A
Pfam	UHGV-0083100_31	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
NCBIFam	UHGV-0083100_31	TIGR01538.1	N/A	N/A	phage portal protein	N/A
structural_annotation	UHGV-0083100_31	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
PHROG	UHGV-0083100_32	phrog_115	326.4	0	minor head protein	head and packaging
UniRef90	UHGV-0083100_32	UniRef90_A0A1C5VLG6	1021.0	0	NAD(+)--arginine ADP-ribosyltransferase EFV	N/A
eggNOG-mapper	UHGV-0083100_32	1235800.C819_00488	352.0	0	Phage Mu protein F like protein	N/A
Pfam	UHGV-0083100_32	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
NCBIFam	UHGV-0083100_32	TIGR01641.1	N/A	N/A	minor capsid protein	N/A
COG	UHGV-0083100_32	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0083100_32	PF21814,PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-0083100_35	phrog_172	162.8	0	head scaffolding protein	head and packaging
UniRef90	UHGV-0083100_35	UniRef90_A0A415FLT0	339.0	0	N/A	N/A
eggNOG-mapper	UHGV-0083100_35	742733.HMPREF9469_01824	220.0	0	N/A	N/A
Pfam	UHGV-0083100_35	PF14265	N/A	N/A	N/A	DUF4355
structural_annotation	UHGV-0083100_35	PF14265	N/A	N/A	N/A	N/A
PHROG	UHGV-0083100_36	phrog_422	294.4	0	major head protein	head and packaging
UniRef90	UHGV-0083100_36	UniRef90_A0A2H4JCM6	494.0	0	Putative capsid protein	N/A
eggNOG-mapper	UHGV-0083100_36	742733.HMPREF9469_01823	499.0	0	N/A	N/A
structural_annotation	UHGV-0083100_36	PF21703,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
PHROG	UHGV-0083100_37	phrog_2724	63.2	4.5e-18	N/A	unknown function
UniRef90	UHGV-0083100_37	UniRef90_A0A1C5VLL2	141.0	2.3696e-42	Rho termination factor, N-terminal domain	N/A
Pfam	UHGV-0083100_37	PF07498	N/A	N/A	Rho termination factor, N-terminal domain	Rho_N
COG	UHGV-0083100_37	COG0261	N/A	N/A	Ribosomal protein L21	N/A
structural_annotation	UHGV-0083100_37	PF07498	N/A	N/A	N/A	N/A
PHROG	UHGV-0083100_38	phrog_132	86.6	2.1e-25	head-tail adaptor	connector
UniRef90	UHGV-0083100_38	UniRef90_A0A1G5F1K3	209.0	0	Phage gp6-like head-tail connector protein	N/A
eggNOG-mapper	UHGV-0083100_38	742733.HMPREF9469_01821	150.0	1.4013e-45	Phage gp6-like head-tail connector protein	N/A
Pfam	UHGV-0083100_38	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
structural_annotation	UHGV-0083100_38	PF05135	N/A	N/A	N/A	N/A
PHROG	UHGV-0083100_39	phrog_2168	105.8	1.9e-31	N/A	unknown function
eggNOG-mapper	UHGV-0083100_39	742733.HMPREF9469_01820	130.0	1.16e-37	N/A	N/A
structural_annotation	UHGV-0083100_39	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0083100_40	phrog_5	77.3	2.7e-22	tail completion or Neck1 protein	connector
UniRef90	UHGV-0083100_40	UniRef90_A0A1G5F1L8	351.0	0	Phage protein, HK97 gp10 family	N/A
eggNOG-mapper	UHGV-0083100_40	742733.HMPREF9469_01819	170.0	0	Bacteriophage HK97-gp10, putative tail-component	N/A
Pfam	UHGV-0083100_40	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
NCBIFam	UHGV-0083100_40	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
structural_annotation	UHGV-0083100_40	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0083100_41	1235800.C819_00480	146.0	7.84727e-44	N/A	N/A
structural_annotation	UHGV-0083100_41	PF05657	N/A	N/A	N/A	N/A
PHROG	UHGV-0083100_42	phrog_158	50.0	0.000000000000061	major tail protein	tail
UniRef90	UHGV-0083100_42	UniRef90_A0A415FLM9	273.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-0083100_42	742733.HMPREF9469_01817	173.0	0	Phage tail tube protein, TTP	N/A
structural_annotation	UHGV-0083100_42	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
UniRef90	UHGV-0083100_43	UniRef90_UPI001EE8B5C4	154.0	2.8026e-45	N/A	N/A
eggNOG-mapper	UHGV-0083100_43	742733.HMPREF9469_01816	123.0	4.15e-34	N/A	N/A
Pfam	UHGV-0083100_43	PF19591	N/A	N/A	N/A	DUF6096
structural_annotation	UHGV-0083100_43	PF19591	N/A	N/A	N/A	N/A
PHROG	UHGV-0083100_44	phrog_2066	76.1	4.4e-22	N/A	unknown function
PHROG	UHGV-0083100_45	phrog_1535	194.9	0	tail length tape measure protein	tail
UniRef90	UHGV-0083100_45	UniRef90_A0A448W7L1	1224.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0083100_45	1232453.BAIF02000058_gene1637	215.0	0	phage tail tape measure protein	N/A
COG	UHGV-0083100_45	COG5412	N/A	N/A	Phage-related protein	N/A
PHROG	UHGV-0083100_46	phrog_1194	96.1	2.4e-28	N/A	unknown function
UniRef90	UHGV-0083100_46	UniRef90_R5Z572	64.7	0.0000000000195	Putative phage protein	N/A
eggNOG-mapper	UHGV-0083100_46	1232453.BAIF02000058_gene1638	161.0	0	N/A	N/A
structural_annotation	UHGV-0083100_46	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0083100_47	phrog_2566	73.4	2.1e-21	N/A	unknown function
eggNOG-mapper	UHGV-0083100_47	1294142.CINTURNW_1040	54.3	0.0000000136	N/A	N/A
PHROG	UHGV-0083100_48	phrog_1401	76.9	2.4e-22	N/A	unknown function
UniRef90	UHGV-0083100_48	UniRef90_A0A7C6P910	75.1	0.0000000000000076	N/A	N/A
eggNOG-mapper	UHGV-0083100_48	1232453.BAIF02000058_gene1640	89.0	3.62e-21	N/A	N/A
structural_annotation	UHGV-0083100_48	PF07761	N/A	N/A	N/A	N/A
PHROG	UHGV-0083100_49	phrog_6616	121.2	0	tail protein	tail
UniRef90	UHGV-0083100_49	UniRef90_UPI001C10B551	823.0	0	tail fiber domain-containing protein	N/A
eggNOG-mapper	UHGV-0083100_49	411459.RUMOBE_00923	629.0	0	N/A	N/A
COG	UHGV-0083100_49	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0083100_49	PF05113,PF02010,NF033848,NF011764,COG3500	N/A	N/A	N/A	N/A
KOfam	UHGV-0083100_52	K03733	198.7	0	xerC; integrase/recombinase XerC	N/A
PHROG	UHGV-0083100_52	phrog_1	160.8	0	integrase	integration and excision
UniRef90	UHGV-0083100_52	UniRef90_A0A6L8Y1E4	609.0	0	Tyrosine-type recombinase/integrase	N/A
eggNOG-mapper	UHGV-0083100_52	411459.RUMOBE_00920	572.0	0	Phage integrase, N-terminal SAM-like domain	N/A
Pfam	UHGV-0083100_52	PF13495	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_4
Pfam	UHGV-0083100_52	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0083100_52	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-0083100_52	PF00589,PF02899,MF_01807,TIGR02224,COG4973	N/A	N/A	N/A	N/A