UHGV-0083757 (vOTU-040822)

Viral Genome: UHGV-0083757

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0083757
vOTU ID	vOTU-040822
Representative Genome?	Yes
Source	GPD
Original genome ID	uvig_161157
Associated BioSample	SAMEA3136671
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	55.99 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	15
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9799
Virus hallmark genes (geNomad)	7
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	19.8
Jumbo phage	No

Genome content
Genome length (bp)	19,890
GC content	56.62%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	29
CDS density	97%
Average CDS length (bps)	663.10
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 55.99)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0083757_1	phrog_104	175.4	0	portal protein	head and packaging
UniRef90	UHGV-0083757_1	UniRef90_A0A6N8H2B6	607.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0083757_1	748224.HMPREF9436_01468	592.0	0	Phage portal protein, SPP1 Gp6-like	N/A
structural_annotation	UHGV-0083757_1	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0083757_2	phrog_193	120.5	1.5e-35	head maturation protease	head and packaging
UniRef90	UHGV-0083757_2	UniRef90_A0A6N8H118	357.0	0	CdiA_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0083757_2	748224.HMPREF9436_01469	394.0	0	N/A	N/A
COG	UHGV-0083757_2	COG5529	N/A	N/A	Phage-encoded DNA-binding protein ECs1768, contains HTH and DnaT DNA-binding domains	N/A
PHROG	UHGV-0083757_4	phrog_478	125.0	3.2e-37	site-specific recombination directionality factor RDF	integration and excision
UniRef90	UHGV-0083757_4	UniRef90_A0A373Q857	161.0	0	YopX domain-containing protein	N/A
eggNOG-mapper	UHGV-0083757_4	1123263.AUKY01000096_gene1821	75.5	9.58e-16	N/A	N/A
PHROG	UHGV-0083757_5	phrog_774	45.4	0.00000000000053	N/A	unknown function
eggNOG-mapper	UHGV-0083757_5	1042156.CXIVA_01820	55.8	0.00000000481	N/A	N/A
PHROG	UHGV-0083757_6	phrog_194	85.4	8.6e-25	head scaffolding protein	head and packaging
UniRef90	UHGV-0083757_6	UniRef90_D4K444	163.0	0	Phage minor structural protein GP20	N/A
eggNOG-mapper	UHGV-0083757_6	748224.HMPREF9436_03336	164.0	0	Phage minor structural protein GP20	N/A
Pfam	UHGV-0083757_6	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-0083757_6	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0083757_7	phrog_10	142.3	4.30058e-42	major head protein	head and packaging
UniRef90	UHGV-0083757_7	UniRef90_A0A1Y4TJU9	514.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-0083757_7	748224.HMPREF9436_00690	447.0	0	Phage capsid family	N/A
Pfam	UHGV-0083757_7	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0083757_7	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0083757_7	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0083757_7	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0083757_9	phrog_137	54.0	0.0000000000000019	head-tail adaptor Ad1	connector
UniRef90	UHGV-0083757_9	UniRef90_E2ZGA8	158.0	0	Phage protein Gp19/Gp15/Gp42	N/A
structural_annotation	UHGV-0083757_9	PF09355	N/A	N/A	N/A	N/A
PHROG	UHGV-0083757_10	phrog_501	63.6	3.4e-18	head closure Hc1	connector
eggNOG-mapper	UHGV-0083757_10	748224.HMPREF9436_00693	165.0	0	N/A	N/A
structural_annotation	UHGV-0083757_10	PF12206,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0083757_11	phrog_387	64.6	1.3e-18	neck protein	connector
UniRef90	UHGV-0083757_11	UniRef90_Q7Y4I0	60.8	0.000000000206	Gp44	N/A
eggNOG-mapper	UHGV-0083757_11	936375.HMPREF1152_0683	68.6	0.0000000000000312	N/A	N/A
PHROG	UHGV-0083757_12	phrog_123	57.3	3.1e-16	tail terminator	connector
UniRef90	UHGV-0083757_12	UniRef90_Q7Y4H9	125.0	5.8e-35	Gp45	N/A
eggNOG-mapper	UHGV-0083757_12	157924.Q7Y4H9_9CAUD	125.0	9.73e-36	N/A	N/A
structural_annotation	UHGV-0083757_12	PF06141	N/A	N/A	N/A	N/A
PHROG	UHGV-0083757_13	phrog_117	173.4	0	major tail protein	tail
UniRef90	UHGV-0083757_13	UniRef90_A0A356C4M0	217.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-0083757_13	873448.STRPO_0291	210.0	0	N/A	N/A
structural_annotation	UHGV-0083757_13	PF04630,TIGR01603,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0083757_14	phrog_1526	62.2	9.2e-18	N/A	unknown function
eggNOG-mapper	UHGV-0083757_14	875454.BAEW01000017_gene1589	58.5	0.000000000353	N/A	N/A
PHROG	UHGV-0083757_15	phrog_1633	119.9	1.3e-35	N/A	unknown function
UniRef90	UHGV-0083757_15	UniRef90_UPI0015CCAF51	110.0	5.38e-29	N/A	N/A
eggNOG-mapper	UHGV-0083757_15	768726.HMPREF9178_1055	104.0	2.54e-27	N/A	N/A
Pfam	UHGV-0083757_15	PF17318	N/A	N/A	N/A	DUF5361
structural_annotation	UHGV-0083757_15	PF17318	N/A	N/A	N/A	N/A
PHROG	UHGV-0083757_16	phrog_6900	234.1	0	tail length tape measure protein	tail
UniRef90	UHGV-0083757_16	UniRef90_A0A1C6EH41	298.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0083757_16	748224.HMPREF9436_00699	290.0	0	Phage tail tape measure protein, TP901 family	N/A
COG	UHGV-0083757_16	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0083757_16	MF_04138,COG5281	N/A	N/A	N/A	N/A
PHROG	UHGV-0083757_17	phrog_1194	41.8	0.000000000015	N/A	unknown function
eggNOG-mapper	UHGV-0083757_17	411471.SUBVAR_06933	103.0	7.69e-27	N/A	N/A
structural_annotation	UHGV-0083757_17	PF20458,TIGR02126,COG4718	N/A	N/A	N/A	N/A
PHROG	UHGV-0083757_18	phrog_18190	82.1	3.9e-33	N/A	unknown function
eggNOG-mapper	UHGV-0083757_18	411471.SUBVAR_06932	301.0	0	N/A	N/A
structural_annotation	UHGV-0083757_18	PF05954,PF00629,PF03424,NF033848,NF033675,COG4379	N/A	N/A	N/A	N/A
PHROG	UHGV-0083757_19	phrog_18444	80.6	1.1e-23	N/A	unknown function
UniRef90	UHGV-0083757_19	UniRef90_UPI00156E9A45	57.8	0.00000000102	peptide chain release factor 2	N/A
eggNOG-mapper	UHGV-0083757_19	1294142.CINTURNW_1707	58.9	0.0000000000598	N/A	N/A
structural_annotation	UHGV-0083757_21	PF12245	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0083757_22	428125.CLOLEP_01433	49.7	0.00000117	N/A	N/A
PHROG	UHGV-0083757_23	phrog_13589	184.5	0	N/A	unknown function
eggNOG-mapper	UHGV-0083757_23	742733.HMPREF9469_05009	229.0	0	N/A	N/A
PHROG	UHGV-0083757_25	phrog_19111	52.3	9.6e-27	N/A	unknown function
eggNOG-mapper	UHGV-0083757_25	756499.Desde_3162	110.0	2.59e-24	nuclear chromosome segregation	N/A
COG	UHGV-0083757_25	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
PHROG	UHGV-0083757_26	phrog_24267	58.2	1.9e-16	N/A	unknown function
eggNOG-mapper	UHGV-0083757_26	508419.F8J176_9CAUD	115.0	1.28e-25	peptidoglycan catabolic process	N/A
Pfam	UHGV-0083757_26	PF11133	N/A	N/A	Head fiber protein	Phage_head_fibr
Pfam	UHGV-0083757_26	PF03406	N/A	N/A	Phage tail fibre repeat	Phage_fiber_2
KOfam	UHGV-0083757_27	K07273	177.5	0	acm; lysozyme	N/A
PHROG	UHGV-0083757_27	phrog_291	148.0	6.16571e-44	endolysin	lysis
UniRef90	UHGV-0083757_27	UniRef90_A0A367G061	521.0	0	Peptidase_M23 domain-containing protein (Fragment)	N/A
eggNOG-mapper	UHGV-0083757_27	411471.SUBVAR_06927	313.0	0	Glycosyl hydrolases family 25	N/A
Pfam	UHGV-0083757_27	PF01551	N/A	N/A	Peptidase family M23	Peptidase_M23
Pfam	UHGV-0083757_27	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-0083757_27	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-0083757_27	PF01551,PF01183,NF040883,COG0739,COG3757	N/A	N/A	N/A	N/A
PHROG	UHGV-0083757_28	phrog_1863	71.9	5.1e-21	N/A	unknown function
eggNOG-mapper	UHGV-0083757_28	693746.OBV_18260	110.0	6.4e-31	N/A	N/A
PHROG	UHGV-0083757_29	phrog_1129	61.1	1.5e-17	holin	lysis
UniRef90	UHGV-0083757_29	UniRef90_A0A367FT42	162.0	0	Enolase	N/A
eggNOG-mapper	UHGV-0083757_29	693746.OBV_13280	113.0	1.24e-31	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-0083757_29	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0083757_29	PF06946	N/A	N/A	N/A	N/A