UHGV-0084501 (vOTU-097520)

Viral Genome: UHGV-0084501

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0084501
vOTU ID	vOTU-097520
Representative Genome?	Yes
Source	GPD
Original genome ID	uvig_151625
Associated BioSample	SAMEA2784493
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	58.32 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	9
CheckV host markers	3
Recoded stop codon	No

Viral Content
geNomad score	0.9656
Virus hallmark genes (geNomad)	4
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	9.98
Jumbo phage	No

Genome content
Genome length (bp)	25,379
GC content	42.10%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	41
CDS density	89%
Average CDS length (bps)	548.78
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 58.32)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0084501_1	K06334	212.1	0	cotJC; spore coat protein JC	N/A
PHROG	UHGV-0084501_1	phrog_7573	176.5	0	N/A	unknown function
UniRef90	UHGV-0084501_1	UniRef90_A0A350VV93	305.0	0	Spore coat protein CotJC	N/A
eggNOG-mapper	UHGV-0084501_1	511680.BUTYVIB_02029	250.0	0	PFAM Manganese containing catalase	N/A
Pfam	UHGV-0084501_1	PF05067	N/A	N/A	Manganese containing catalase	Mn_catalase
COG	UHGV-0084501_1	COG3546	N/A	N/A	Mn-containing catalase (includes spore coat protein CotJC)	N/A
structural_annotation	UHGV-0084501_1	PF02185,MF_01506,TIGR04535,COG3546	N/A	N/A	N/A	N/A
KOfam	UHGV-0084501_2	K06400	379.4	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-0084501_2	phrog_95	384.7	0	integrase	integration and excision
UniRef90	UHGV-0084501_2	UniRef90_A0A350VV94	882.0	0	Recombinase family protein	N/A
eggNOG-mapper	UHGV-0084501_2	742765.HMPREF9457_02089	362.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-0084501_2	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-0084501_2	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-0084501_2	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-0084501_2	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0084501_2	PF00239,PF07508,PF13408,NF041201,COG1961	N/A	N/A	N/A	N/A
KOfam	UHGV-0084501_3	K15773	53.9	0.0000000000000042	hipB; HTH-type transcriptional regulator / antitoxin HipB	N/A
PHROG	UHGV-0084501_3	phrog_29047	57.0	4e-16	N/A	unknown function
UniRef90	UHGV-0084501_3	UniRef90_A0A350VV95	123.0	1.63e-35	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0084501_3	138119.DSY3664	60.1	0.0000000000648	sequence-specific DNA binding	N/A
Pfam	UHGV-0084501_3	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0084501_3	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
UniRef90	UHGV-0084501_4	UniRef90_A0A1T5FTZ6	165.0	0	RelE-like toxin of type II toxin-antitoxin system HigB	N/A
eggNOG-mapper	UHGV-0084501_4	1280694.AUJQ01000004_gene537	163.0	0	N/A	N/A
AcrCatalog	UHGV-0084501_4	cluster_3470	60.8	0.00000000000000733	NA	N/A
structural_annotation	UHGV-0084501_4	PF05015,TIGR00053,COG4115	N/A	N/A	N/A	N/A
KOfam	UHGV-0084501_5	K18831	84.3	1.9e-24	higA; HTH-type transcriptional regulator / antitoxin HigA	N/A
PHROG	UHGV-0084501_5	phrog_2439	95.8	2.5e-28	transcriptional regulator	transcription regulation
UniRef90	UHGV-0084501_5	UniRef90_D4RXQ2	486.0	0	Addiction module antidote protein HigA	N/A
eggNOG-mapper	UHGV-0084501_5	511680.BUTYVIB_00603	486.0	0	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0084501_5	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
Pfam	UHGV-0084501_5	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
NCBIFam	UHGV-0084501_5	TIGR02607.1	N/A	N/A	HigA family addiction module antitoxin	N/A
COG	UHGV-0084501_5	COG3093	N/A	N/A	Plasmid maintenance system antidote protein VapI, contains XRE-type HTH domain	N/A
structural_annotation	UHGV-0084501_5	PF12844,MF_00535,TIGR02607,COG3093,COG2856	N/A	N/A	N/A	N/A
UniRef90	UHGV-0084501_6	UniRef90_A0A414AFX2	112.0	2.08e-30	N/A	N/A
eggNOG-mapper	UHGV-0084501_6	397288.C806_04712	111.0	5.7e-31	N/A	N/A
Pfam	UHGV-0084501_6	PF10387	N/A	N/A	N/A	DUF2442
structural_annotation	UHGV-0084501_6	PF10387,COG3536	N/A	N/A	N/A	N/A
PHROG	UHGV-0084501_7	phrog_2158	198.9	0	abortive infection resistance protein	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0084501_7	UniRef90_D4RZM6	530.0	0	Abi-like protein	N/A
eggNOG-mapper	UHGV-0084501_7	511680.BUTYVIB_01292	530.0	0	Abi-like protein	N/A
PADLOC	UHGV-0084501_7	AbiD	129.5	5.7e-38	AbiD	Abi
Pfam	UHGV-0084501_7	PF07751	N/A	N/A	Abi-like protein	Abi_2
COG	UHGV-0084501_7	COG4823	N/A	N/A	Abortive infection bacteriophage resistance protein	N/A
structural_annotation	UHGV-0084501_7	PF07751,COG4823	N/A	N/A	N/A	N/A
PHROG	UHGV-0084501_8	phrog_87	81.4	9.3e-24	metallo-protease	other
UniRef90	UHGV-0084501_8	UniRef90_A0A350VV99	281.0	0	Peptidase_M78 domain-containing protein	N/A
eggNOG-mapper	UHGV-0084501_8	397288.C806_00132	155.0	0	Zn peptidase	N/A
Pfam	UHGV-0084501_8	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
COG	UHGV-0084501_8	COG2856	N/A	N/A	Zn-dependent peptidase ImmA, M78 family	N/A
structural_annotation	UHGV-0084501_8	PF06114	N/A	N/A	N/A	N/A
PHROG	UHGV-0084501_9	phrog_16228	199.5	0	N/A	unknown function
UniRef90	UHGV-0084501_9	UniRef90_A0A1E3UEB9	329.0	0	Uma2 domain-containing protein	N/A
eggNOG-mapper	UHGV-0084501_9	1235802.C823_03088	303.0	0	Putative restriction endonuclease	N/A
Pfam	UHGV-0084501_9	PF05685	N/A	N/A	Putative restriction endonuclease	Uma2
COG	UHGV-0084501_9	COG4636	N/A	N/A	Endonuclease, Uma2 family (restriction endonuclease fold)	N/A
structural_annotation	UHGV-0084501_9	PF05685,COG4636	N/A	N/A	N/A	N/A
KOfam	UHGV-0084501_10	K18830	68.7	1.2e-19	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-0084501_10	phrog_8	58.9	9e-17	transcriptional regulator	transcription regulation
UniRef90	UHGV-0084501_10	UniRef90_A0A350VVA1	261.0	0	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0084501_10	641107.CDLVIII_1309	142.0	1.98998e-41	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0084501_10	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0084501_10	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0084501_10	PF12844,MF_00535,NF007257,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0084501_14	K03427	54.8	0.0000000000000014	hsdM; type I restriction enzyme M protein [EC:2.1.1.72]	N/A
PHROG	UHGV-0084501_14	phrog_5696	178.3	0	N/A	unknown function
UniRef90	UHGV-0084501_14	UniRef90_A0A3D2TWS8	194.0	0	Restriction endonuclease subunit M	N/A
eggNOG-mapper	UHGV-0084501_14	395019.Bmul_5588	112.0	1.5e-26	N-6 DNA Methylase	N/A
PADLOC	UHGV-0084501_14	MTase_I_00018	41.9	0.000000000015	Type I methyltransferase	RM
Pfam	UHGV-0084501_14	PF02384	N/A	N/A	N-6 DNA Methylase	N6_Mtase
COG	UHGV-0084501_14	COG0286	N/A	N/A	Type I restriction-modification system, DNA methylase subunit	N/A
structural_annotation	UHGV-0084501_14	COG0286	N/A	N/A	N/A	N/A
KOfam	UHGV-0084501_15	K04763	195.6	0	xerD; integrase/recombinase XerD	N/A
PHROG	UHGV-0084501_15	phrog_1	161.4	0	integrase	integration and excision
UniRef90	UHGV-0084501_15	UniRef90_A0A6L5YHS5	459.0	0	Tyrosine-type recombinase/integrase	N/A
eggNOG-mapper	UHGV-0084501_15	565653.EGBG_01953	206.0	0	Phage integrase, N-terminal SAM-like domain	N/A
Pfam	UHGV-0084501_15	PF13495	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_4
Pfam	UHGV-0084501_15	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0084501_15	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-0084501_15	PF00589,PF02899,MF_01807,TIGR02224,COG4973	N/A	N/A	N/A	N/A
UniRef90	UHGV-0084501_16	UniRef90_H1LSA5	58.9	0.00000000102	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0084501_16	861454.HMPREF9099_00333	58.9	0.000000000171	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-0084501_16	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
structural_annotation	UHGV-0084501_16	PF13560,NF041951,COG1396	N/A	N/A	N/A	N/A
Pfam	UHGV-0084501_25	PF20323	N/A	N/A	N/A	DUF6618
structural_annotation	UHGV-0084501_25	PF20323	N/A	N/A	N/A	N/A
PHROG	UHGV-0084501_26	phrog_3584	272.8	0	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0084501_26	UniRef90_A0A4P8IFK4	245.0	0	N/A	N/A
eggNOG-mapper	UHGV-0084501_26	411459.RUMOBE_01756	365.0	0	COG NOG14934 non supervised orthologous group	N/A
structural_annotation	UHGV-0084501_26	PF21578	N/A	N/A	N/A	N/A
PHROG	UHGV-0084501_27	phrog_824	156.7	0	N/A	unknown function
UniRef90	UHGV-0084501_27	UniRef90_A0A2N0K9N3	204.0	0	Nuclease	N/A
eggNOG-mapper	UHGV-0084501_27	742741.HMPREF9475_00407	199.0	0	VRR_NUC	N/A
Pfam	UHGV-0084501_27	PF08774	N/A	N/A	VRR-NUC domain	VRR_NUC
KOfam	UHGV-0084501_29	K03496	168.6	0	parA, soj; chromosome partitioning protein	N/A
PHROG	UHGV-0084501_29	phrog_164	147.7	8.40779e-44	ParA-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0084501_29	UniRef90_A0A3R6XV13	402.0	0	ParA family protein	N/A
eggNOG-mapper	UHGV-0084501_29	411459.RUMOBE_01750	359.0	0	CobQ CobB MinD ParA nucleotide binding domain protein	N/A
Pfam	UHGV-0084501_29	PF13614	N/A	N/A	AAA domain	AAA_31
COG	UHGV-0084501_29	COG1192	N/A	N/A	ParA-like ATPase involved in chromosome/plasmid partitioning or cellulose biosynthesis protein BcsQ	N/A
structural_annotation	UHGV-0084501_29	PF13614,MF_00533,NF010443,COG1192	N/A	N/A	N/A	N/A
KOfam	UHGV-0084501_30	K03497	51.4	0.000000000000014	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	N/A
PHROG	UHGV-0084501_30	phrog_15982	581.8	0	N/A	unknown function
UniRef90	UHGV-0084501_30	UniRef90_A0A7X5CGW3	439.0	0	N/A	N/A
eggNOG-mapper	UHGV-0084501_30	742741.HMPREF9475_00414	445.0	0	N/A	N/A
Pfam	UHGV-0084501_30	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
Pfam	UHGV-0084501_30	PF12961	N/A	N/A	N/A	DUF3850
COG	UHGV-0084501_30	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-0084501_30	PF12961,PF02195,MF_02015,MF_00684,TIGR04285,NF003443,COG1475,COG3097	N/A	N/A	N/A	N/A
KOfam	UHGV-0084501_31	K03469	68.5	1.3e-19	rnhA, RNASEH1; ribonuclease HI [EC:3.1.26.4]	N/A
PHROG	UHGV-0084501_31	phrog_531	62.7	6.5e-18	Rnase H	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0084501_31	UniRef90_UPI00190C2E98	83.6	1.11e-17	ribonuclease HI	N/A
eggNOG-mapper	UHGV-0084501_31	1293054.HSACCH_01448	72.0	0.000000000000481	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids	N/A
Pfam	UHGV-0084501_31	PF00075	N/A	N/A	RNase H	RNase_H
COG	UHGV-0084501_31	COG0328	N/A	N/A	Ribonuclease HI	N/A
structural_annotation	UHGV-0084501_31	PF00075,MF_00042,NF001236,COG0328	N/A	N/A	N/A	N/A
PHROG	UHGV-0084501_32	phrog_17690	48.8	0.0000000000001	N/A	unknown function
eggNOG-mapper	UHGV-0084501_32	33035.JPJF01000123_gene2433	55.1	0.0000000883	N/A	N/A
structural_annotation	UHGV-0084501_33	PF18024,TIGR04381	N/A	N/A	N/A	N/A
KOfam	UHGV-0084501_35	K03111	124.1	1.9e-36	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0084501_35	phrog_44	130.5	1.3e-38	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0084501_35	UniRef90_R7BHP7	206.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0084501_35	511680.BUTYVIB_00906	197.0	0	Single-strand binding protein family	N/A
Pfam	UHGV-0084501_35	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0084501_35	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0084501_35	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0084501_35	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0084501_35	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0084501_37	phrog_36	69.7	4.9e-20	transcriptional regulator	transcription regulation
UniRef90	UHGV-0084501_37	UniRef90_UPI001C3C1569	93.2	2.21e-21	N/A	N/A
eggNOG-mapper	UHGV-0084501_37	1235800.C819_02243	86.7	1.46e-19	N/A	N/A
Pfam	UHGV-0084501_37	PF07374	N/A	N/A	N/A	DUF1492
KOfam	UHGV-0084501_38	K07474	158.1	0	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-0084501_38	phrog_51	154.2	0	terminase small subunit	head and packaging
UniRef90	UHGV-0084501_38	UniRef90_UPI001D1288A8	237.0	0	terminase small subunit	N/A
eggNOG-mapper	UHGV-0084501_38	1095750.HMPREF9970_1030	182.0	0	Terminase small subunit	N/A
Pfam	UHGV-0084501_38	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-0084501_38	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0084501_38	PF03592,COG3728	N/A	N/A	N/A	N/A
KOfam	UHGV-0084501_39	K06909	430.3	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0084501_39	phrog_3717	241.3	0	terminase large subunit	head and packaging
UniRef90	UHGV-0084501_39	UniRef90_A0A844DY69	820.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0084501_39	861454.HMPREF9099_00528	692.0	0	Phage terminase large subunit	N/A
Pfam	UHGV-0084501_39	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-0084501_39	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-0084501_39	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0084501_39	COG1783	N/A	N/A	Phage terminase large subunit	N/A
HAMAP	UHGV-0084501_39	MF_04145	N/A	N/A	Terminase, large subunit	N/A
structural_annotation	UHGV-0084501_39	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0084501_40	phrog_64	316.3	0	portal protein	head and packaging
UniRef90	UHGV-0084501_40	UniRef90_A0A412Q0Q7	648.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0084501_40	742740.HMPREF9474_02357	621.0	0	Phage portal protein, SPP1 family	N/A
Pfam	UHGV-0084501_40	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0084501_40	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0084501_41	phrog_115	476.6	0	minor head protein	head and packaging
UniRef90	UHGV-0084501_41	UniRef90_UPI0018971EA5	535.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0084501_41	742740.HMPREF9474_02356	513.0	0	Phage head morphogenesis protein, SPP1 gp7 family	N/A
Pfam	UHGV-0084501_41	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
Pfam	UHGV-0084501_41	PF14424	N/A	N/A	The BURPS668_1122 family of deaminases	Toxin-deaminase
NCBIFam	UHGV-0084501_41	TIGR01641.1	N/A	N/A	minor capsid protein	N/A
COG	UHGV-0084501_41	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0084501_41	PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A