UHGV-0085068 (vOTU-075241)

Viral Genome: UHGV-0085068

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0085068
vOTU ID	vOTU-075241
Representative Genome?	Yes
Source	GPD
Original genome ID	uvig_154256
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	96.71 (High-quality)
Trimmed provirus	Yes
CheckV viral markers	21
CheckV host markers	5
Recoded stop codon	No

Viral Content
geNomad score	0.9761
Virus hallmark genes (geNomad)	11
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	39.35
Jumbo phage	No

Genome content
Genome length (bp)	39,080
GC content	43.91%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	57
CDS density	94%
Average CDS length (bps)	647.21
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 96.71)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0085068_1	K01567	98.8	4.3e-29	pdaA; peptidoglycan-N-acetylmuramic acid deacetylase [EC:3.5.1.-]	N/A
UniRef90	UHGV-0085068_1	UniRef90_A0A3A8ZCD5	122.0	2.41e-34	Polysaccharide deacetylase family protein	N/A
eggNOG-mapper	UHGV-0085068_1	357809.Cphy_0601	122.0	2.27e-33	Polysaccharide deacetylase	N/A
Pfam	UHGV-0085068_1	PF01522	N/A	N/A	Polysaccharide deacetylase	Polysacc_deac_1
COG	UHGV-0085068_1	COG0726	N/A	N/A	Peptidoglycan/xylan/chitin deacetylase, PgdA/NodB/CDA1 family	N/A
KOfam	UHGV-0085068_2	K01448	42.3	0.0000000000058	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0085068_2	phrog_1794	70.0	5.1e-20	amidase	lysis
UniRef90	UHGV-0085068_2	UniRef90_A0A416MN83	442.0	0	MurNAc-LAA domain-containing protein	N/A
eggNOG-mapper	UHGV-0085068_2	478749.BRYFOR_07564	122.0	3.3e-28	n-acetylmuramoyl-l-alanine amidase	N/A
Pfam	UHGV-0085068_2	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
Pfam	UHGV-0085068_2	PF08239	N/A	N/A	Bacterial SH3 domain	SH3_3
COG	UHGV-0085068_2	COG3087	N/A	N/A	Cell division protein FtsN	N/A
structural_annotation	UHGV-0085068_2	PF01520,TIGR02883,COG0860	N/A	N/A	N/A	N/A
PHROG	UHGV-0085068_3	phrog_199	67.9	1.4e-19	holin	lysis
UniRef90	UHGV-0085068_3	UniRef90_A0A3D3UA08	276.0	0	Holin	N/A
eggNOG-mapper	UHGV-0085068_3	411460.RUMTOR_02100	219.0	0	N/A	N/A
Pfam	UHGV-0085068_3	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-0085068_3	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
structural_annotation	UHGV-0085068_3	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
PHROG	UHGV-0085068_4	phrog_2310	43.3	0.0000000000038	N/A	unknown function
UniRef90	UHGV-0085068_5	UniRef90_UPI001D075611	228.0	0	GDSL-type esterase/lipase family protein	N/A
eggNOG-mapper	UHGV-0085068_5	457412.RSAG_01112	85.9	0.0000000000000178	N/A	N/A
PHROG	UHGV-0085068_6	phrog_16164	242.0	0	N/A	unknown function
eggNOG-mapper	UHGV-0085068_6	457412.RSAG_01113	76.3	0.0000000000000943	N/A	N/A
structural_annotation	UHGV-0085068_6	PF10651,NF032891	N/A	N/A	N/A	N/A
PHROG	UHGV-0085068_7	phrog_372	240.1	0	tail protein	tail
UniRef90	UHGV-0085068_7	UniRef90_UPI001C0AA9E4	220.0	0	N/A	N/A
eggNOG-mapper	UHGV-0085068_7	1235796.C815_00905	147.0	2.99e-34	N/A	N/A
Pfam	UHGV-0085068_7	PF05895	N/A	N/A	N/A	DUF859
Pfam	UHGV-0085068_7	PF13884	N/A	N/A	Chaperone of endosialidase	Peptidase_S74
structural_annotation	UHGV-0085068_7	PF05895,MF_04116,NF010681,COG3291	N/A	N/A	N/A	N/A
PHROG	UHGV-0085068_8	phrog_6616	412.1	0	tail protein	tail
UniRef90	UHGV-0085068_8	UniRef90_UPI00085BC306	231.0	0	tail fiber domain-containing protein	N/A
eggNOG-mapper	UHGV-0085068_8	1121866.AUGK01000003_gene1439	288.0	0	Phage minor structural protein	N/A
COG	UHGV-0085068_8	COG4926	N/A	N/A	Phage-related protein	N/A
PHROG	UHGV-0085068_9	phrog_1194	70.3	2.7e-20	N/A	unknown function
eggNOG-mapper	UHGV-0085068_9	33035.JPJF01000093_gene2242	144.0	3.60134e-43	N/A	N/A
structural_annotation	UHGV-0085068_9	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0085068_10	phrog_1535	489.7	0	tail length tape measure protein	tail
UniRef90	UHGV-0085068_10	UniRef90_A0A1C6JZ05	635.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0085068_10	33035.JPJF01000093_gene2243	621.0	0	phage tail tape measure protein	N/A
COG	UHGV-0085068_10	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
PHROG	UHGV-0085068_11	phrog_8355	114.1	3.5e-34	N/A	unknown function
UniRef90	UHGV-0085068_11	UniRef90_UPI001ADD7ADE	148.0	3.92364e-44	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-0085068_11	1415775.U729_2613	107.0	6.34e-29	N/A	N/A
Pfam	UHGV-0085068_11	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0085068_11	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0085068_12	phrog_8300	72.3	6.4e-21	N/A	unknown function
eggNOG-mapper	UHGV-0085068_12	742740.HMPREF9474_03512	89.0	1.26e-21	N/A	N/A
structural_annotation	UHGV-0085068_12	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0085068_13	phrog_820	131.2	4.5e-39	major tail protein	tail
eggNOG-mapper	UHGV-0085068_13	1282664.H354_06691	207.0	0	N/A	N/A
structural_annotation	UHGV-0085068_13	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0085068_14	phrog_2595	85.8	4.3e-25	head-tail connector protein	connector
UniRef90	UHGV-0085068_14	UniRef90_UPI001C0EB705	202.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0085068_14	742740.HMPREF9474_03510	100.0	2.18e-25	N/A	N/A
Pfam	UHGV-0085068_14	PF12691	N/A	N/A	Bacteriophage minor capsid protein	Minor_capsid_3
structural_annotation	UHGV-0085068_14	PF12691,COG5003	N/A	N/A	N/A	N/A
PHROG	UHGV-0085068_15	phrog_556	55.8	8.3e-16	minor head protein	head and packaging
eggNOG-mapper	UHGV-0085068_15	742740.HMPREF9474_03509	173.0	0	N/A	N/A
PHROG	UHGV-0085068_16	phrog_8710	139.2	1.19993e-41	N/A	unknown function
eggNOG-mapper	UHGV-0085068_16	1304866.K413DRAFT_0782	138.0	4.72994e-41	N/A	N/A
structural_annotation	UHGV-0085068_16	PF10665,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0085068_17	phrog_541	82.5	4.2e-24	head-tail adaptor	connector
eggNOG-mapper	UHGV-0085068_17	1298920.KI911353_gene4848	176.0	0	N/A	N/A
PHROG	UHGV-0085068_18	phrog_15682	69.9	2.2e-20	N/A	unknown function
UniRef90	UHGV-0085068_18	UniRef90_J5WK97	76.6	1.55e-16	Rho termination factor, N-terminal domain protein	N/A
eggNOG-mapper	UHGV-0085068_18	469618.FVAG_01311	73.2	0.00000000000000123	N/A	N/A
PHROG	UHGV-0085068_19	phrog_212	288.1	0	major head protein	head and packaging
UniRef90	UHGV-0085068_19	UniRef90_UPI001C11B7FF	536.0	0	phage capsid protein	N/A
eggNOG-mapper	UHGV-0085068_19	1151292.QEW_2433	484.0	0	N/A	N/A
Pfam	UHGV-0085068_19	PF20911	N/A	N/A	Major capsid protein GP7	GP7
structural_annotation	UHGV-0085068_19	PF05065,MF_04119,NF041162,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0085068_20	phrog_194	165.4	0	head scaffolding protein	head and packaging
UniRef90	UHGV-0085068_20	UniRef90_UPI001D02A5C9	228.0	0	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-0085068_20	1262449.CP6013_3198	149.0	1.27939e-42	Phage minor structural protein GP20	N/A
Pfam	UHGV-0085068_20	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-0085068_20	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0085068_21	phrog_355	59.8	4.2e-17	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0085068_21	UniRef90_A0A396KGT7	194.0	0	N/A	N/A
eggNOG-mapper	UHGV-0085068_21	97138.C820_00250	128.0	2.67e-37	N/A	N/A
Pfam	UHGV-0085068_21	PF14359	N/A	N/A	N/A	DUF4406
structural_annotation	UHGV-0085068_21	PF14359,COG3613	N/A	N/A	N/A	N/A
PHROG	UHGV-0085068_22	phrog_918	86.7	1.6e-25	N/A	unknown function
UniRef90	UHGV-0085068_22	UniRef90_UPI00189D39C2	136.0	4.61001e-40	N/A	N/A
eggNOG-mapper	UHGV-0085068_22	1256908.HMPREF0373_00480	132.0	1.82e-39	N/A	N/A
Pfam	UHGV-0085068_22	PF19791	N/A	N/A	N/A	DUF6275
structural_annotation	UHGV-0085068_22	PF19791	N/A	N/A	N/A	N/A
PHROG	UHGV-0085068_24	phrog_581	244.8	0	minor head protein	head and packaging
UniRef90	UHGV-0085068_24	UniRef90_A0A416Q253	515.0	0	Minor capsid protein	N/A
eggNOG-mapper	UHGV-0085068_24	33035.JPJF01000093_gene2255	460.0	0	N/A	N/A
Pfam	UHGV-0085068_24	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0085068_24	COG5585	N/A	N/A	Putative phage head morphogenesis protein, F of phage Mu or gp7 of SPP1	N/A
structural_annotation	UHGV-0085068_24	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-0085068_25	phrog_25639	129.6	6.2e-39	N/A	unknown function
eggNOG-mapper	UHGV-0085068_25	742740.HMPREF9474_03502	103.0	2.8e-28	N/A	N/A
PHROG	UHGV-0085068_26	phrog_533	243.7	0	portal protein	head and packaging
UniRef90	UHGV-0085068_26	UniRef90_A0A416Q1Z2	785.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0085068_26	1117108.PAALTS15_13582	531.0	0	N/A	N/A
structural_annotation	UHGV-0085068_26	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0085068_27	K06909	95.8	6.3e-28	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0085068_27	phrog_2	68.2	2e-19	terminase large subunit	head and packaging
UniRef90	UHGV-0085068_27	UniRef90_A0A416Q1Q9	806.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0085068_27	1304866.K413DRAFT_0811	661.0	0	Phage terminase, large subunit, PBSX family	N/A
COG	UHGV-0085068_27	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0085068_27	PF03237,PF17289,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0085068_28	phrog_309	190.8	0	terminase small subunit	head and packaging
UniRef90	UHGV-0085068_28	UniRef90_UPI000E5D110A	261.0	0	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0085068_28	742733.HMPREF9469_01828	181.0	0	transposase activity	N/A
COG	UHGV-0085068_28	COG2963	N/A	N/A	Transposase InsE and inactivated derivatives	N/A
structural_annotation	UHGV-0085068_28	PF07141	N/A	N/A	N/A	N/A
PHROG	UHGV-0085068_29	phrog_36	70.1	3.8e-20	transcriptional regulator	transcription regulation
UniRef90	UHGV-0085068_29	UniRef90_A0A416MN03	275.0	0	Sigma70_r4 domain-containing protein	N/A
eggNOG-mapper	UHGV-0085068_29	1256908.HMPREF0373_00671	120.0	5.98e-33	N/A	N/A
Pfam	UHGV-0085068_29	PF04545	N/A	N/A	Sigma-70, region 4	Sigma70_r4
structural_annotation	UHGV-0085068_29	PF04545,MF_00245,TIGR01636,COG2739	N/A	N/A	N/A	N/A
UniRef90	UHGV-0085068_32	UniRef90_R5GX78	55.1	0.000000146	DNA polymerase II large subunit	N/A
KOfam	UHGV-0085068_34	K03469	51.7	0.000000000000018	rnhA, RNASEH1; ribonuclease HI [EC:3.1.26.4]	N/A
PHROG	UHGV-0085068_34	phrog_531	42.1	0.000000000015	Rnase H	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0085068_34	UniRef90_A0A562J9Z1	70.9	0.000000000000372	Ribonuclease H	N/A
eggNOG-mapper	UHGV-0085068_34	1089453.GOSPT_025_00420	67.8	0.00000000000195	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids	N/A
Pfam	UHGV-0085068_34	PF00075	N/A	N/A	RNase H	RNase_H
COG	UHGV-0085068_34	COG0328	N/A	N/A	Ribonuclease HI	N/A
structural_annotation	UHGV-0085068_34	PF00075,MF_00042,NF001236,COG0328	N/A	N/A	N/A	N/A
PHROG	UHGV-0085068_35	phrog_7566	104.4	5.7e-31	N/A	unknown function
eggNOG-mapper	UHGV-0085068_35	411459.RUMOBE_00948	83.6	2.12e-19	N/A	N/A
PHROG	UHGV-0085068_36	phrog_15077	109.9	4.5e-32	N/A	unknown function
UniRef90	UHGV-0085068_36	UniRef90_A0A3A6HZA9	195.0	0	N/A	N/A
eggNOG-mapper	UHGV-0085068_36	411902.CLOBOL_05696	171.0	1.4013e-45	N/A	N/A
structural_annotation	UHGV-0085068_36	PF11300,NF033725	N/A	N/A	N/A	N/A
PHROG	UHGV-0085068_37	phrog_8470	189.3	0	N/A	unknown function
UniRef90	UHGV-0085068_37	UniRef90_UPI001158FAD9	258.0	0	PcfJ domain-containing protein	N/A
eggNOG-mapper	UHGV-0085068_37	411902.CLOBOL_05697	282.0	0	PcfJ-like protein	N/A
Pfam	UHGV-0085068_37	PF14284	N/A	N/A	PcfJ-like protein	PcfJ
structural_annotation	UHGV-0085068_37	PF14284	N/A	N/A	N/A	N/A
PHROG	UHGV-0085068_38	phrog_4433	49.3	0.000000000000013	N/A	unknown function
eggNOG-mapper	UHGV-0085068_38	665956.HMPREF1032_03097	127.0	7.28e-35	regulation of DNA-templated transcription, elongation	N/A
COG	UHGV-0085068_38	COG5164	N/A	N/A	Transcription elongation factor SPT5	N/A
eggNOG-mapper	UHGV-0085068_39	1280698.AUJS01000007_gene1016	103.0	7.51e-26	N/A	N/A
eggNOG-mapper	UHGV-0085068_40	483218.BACPEC_01167	89.0	5.32e-20	N/A	N/A
UniRef90	UHGV-0085068_41	UniRef90_UPI0003F6328F	57.0	0.000000274	Cas9 inhibitor AcrIIA9 family protein	N/A
eggNOG-mapper	UHGV-0085068_41	483218.BACPEC_01167	69.7	0.00000000000116	N/A	N/A
PHROG	UHGV-0085068_43	phrog_3584	179.3	0	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0085068_43	UniRef90_A0A1I5LZL1	155.0	8.32371e-43	Relaxase/Mobilisation nuclease domain-containing protein	N/A
eggNOG-mapper	UHGV-0085068_43	742740.HMPREF9474_04323	162.0	0	N/A	N/A
structural_annotation	UHGV-0085068_43	PF11726	N/A	N/A	N/A	N/A
PHROG	UHGV-0085068_48	phrog_31760	65.2	7.1e-19	N/A	unknown function
PHROG	UHGV-0085068_49	phrog_2232	203.4	0	N/A	unknown function
UniRef90	UHGV-0085068_49	UniRef90_UPI00156E138F	225.0	0	N/A	N/A
eggNOG-mapper	UHGV-0085068_49	1408323.JQKK01000020_gene2985	152.0	3.16974e-42	N/A	N/A
Pfam	UHGV-0085068_49	PF14337	N/A	N/A	Abortive infection alpha	Abi_alpha
structural_annotation	UHGV-0085068_49	PF14337,TIGR03899	N/A	N/A	N/A	N/A
KOfam	UHGV-0085068_52	K22300	56.2	8e-16	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0085068_52	phrog_2328	51.3	0.000000000000016	transcriptional repressor	transcription regulation
UniRef90	UHGV-0085068_52	UniRef90_A0A1Q6RU19	128.0	9.15e-36	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0085068_52	1280698.AUJS01000007_gene1002	104.0	6.71e-27	Helix-turn-helix XRE-family like proteins	N/A
PADLOC	UHGV-0085068_52	retron_type_VI_hth_cluster2_1	43.9	0.0000000000035	N/A	Retron
Pfam	UHGV-0085068_52	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0085068_52	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0085068_52	PF01381,MF_00535,NF007257,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0085068_53	phrog_27136	167.7	0	N/A	unknown function
UniRef90	UHGV-0085068_53	UniRef90_UPI001CED3949	287.0	0	zinc ribbon domain-containing protein	N/A
eggNOG-mapper	UHGV-0085068_53	1411095.X5JB37_9CAUD	96.3	2.63e-21	Short C-terminal domain	N/A
UniRef90	UHGV-0085068_54	UniRef90_A0A6L9H0I5	145.0	4.40008e-43	N/A	N/A
eggNOG-mapper	UHGV-0085068_54	553973.CLOHYLEM_06997	142.0	1.38028e-42	N/A	N/A
Pfam	UHGV-0085068_54	PF14076	N/A	N/A	N/A	DUF4258
structural_annotation	UHGV-0085068_54	PF14076,TIGR02683,COG2929	N/A	N/A	N/A	N/A
PHROG	UHGV-0085068_55	phrog_29304	78.2	7.5e-23	N/A	unknown function
UniRef90	UHGV-0085068_55	UniRef90_A0A176U107	149.0	1.4013e-45	YgiT-type zinc finger domain protein	N/A
eggNOG-mapper	UHGV-0085068_55	33035.JPJF01000019_gene4267	122.0	1.52e-35	N/A	N/A
NCBIFam	UHGV-0085068_55	TIGR03831.1	N/A	N/A	YgiT-type zinc finger protein	N/A
structural_annotation	UHGV-0085068_55	PF14122,TIGR03829	N/A	N/A	N/A	N/A
KOfam	UHGV-0085068_56	K18843	44.0	0.0000000000042	hicB; antitoxin HicB	N/A
PHROG	UHGV-0085068_56	phrog_497	74.8	1.6e-21	toxin-antitoxin system HicB-like	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0085068_56	UniRef90_A0A176U291	275.0	0	Toxin-antitoxin system, antitoxin component, HicB family	N/A
eggNOG-mapper	UHGV-0085068_56	1235792.C808_03055	237.0	0	Toxin-antitoxin system, antitoxin component, HicB family	N/A
Pfam	UHGV-0085068_56	PF15919	N/A	N/A	HicB_like antitoxin of bacterial toxin-antitoxin system	HicB_lk_antitox
COG	UHGV-0085068_56	COG1598	N/A	N/A	Antitoxin component HicB of the HicAB toxin-antitoxin system	N/A
structural_annotation	UHGV-0085068_56	PF15919,COG1598	N/A	N/A	N/A	N/A
KOfam	UHGV-0085068_57	K06400	342.6	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-0085068_57	phrog_95	360.3	0	integrase	integration and excision
UniRef90	UHGV-0085068_57	UniRef90_A0A176U276	1066.0	0	Resolvase protein	N/A
eggNOG-mapper	UHGV-0085068_57	755731.Clo1100_0789	292.0	0	resolvase	N/A
Pfam	UHGV-0085068_57	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-0085068_57	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-0085068_57	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-0085068_57	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0085068_57	PF07508,PF00239,NF041201,COG1961	N/A	N/A	N/A	N/A