UHGV-0085731 (vOTU-119382)

Viral Genome: UHGV-0085731

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0085731
vOTU ID	vOTU-119382
Representative Genome?	Yes
Source	GPD
Original genome ID	uvig_151169
Associated BioSample	SAMEA2784469
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	66.79 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	15
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9816
Virus hallmark genes (geNomad)	8
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	15.56
Jumbo phage	No

Genome content
Genome length (bp)	25,361
GC content	37.79%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	30
CDS density	95%
Average CDS length (bps)	802.70
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 66.79)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0085731_1	phrog_199	71.7	9.4e-21	holin	lysis
UniRef90	UHGV-0085731_1	UniRef90_A0A3B8UJ75	241.0	0	Holin	N/A
eggNOG-mapper	UHGV-0085731_1	483218.BACPEC_01140	213.0	0	Bacteriophage holin family	N/A
Pfam	UHGV-0085731_1	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-0085731_1	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
COG	UHGV-0085731_1	COG4824	N/A	N/A	Phage-related holin (Lysis protein)	N/A
structural_annotation	UHGV-0085731_1	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
PHROG	UHGV-0085731_3	phrog_2566	45.8	0.00000000000094	N/A	unknown function
PHROG	UHGV-0085731_4	phrog_6616	158.0	0	tail protein	tail
UniRef90	UHGV-0085731_4	UniRef90_A0A8D9PGP3	749.0	0	Minor structural protein	N/A
eggNOG-mapper	UHGV-0085731_4	1499683.CCFF01000014_gene3896	276.0	0	Phage minor structural protein	N/A
COG	UHGV-0085731_4	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0085731_4	PF16466,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-0085731_5	phrog_1401	66.5	3.9e-19	N/A	unknown function
UniRef90	UHGV-0085731_5	UniRef90_UPI00129D2DCF	66.6	0.0000000000196	N/A	N/A
eggNOG-mapper	UHGV-0085731_5	1294142.CINTURNW_1705	60.8	0.000000000553	N/A	N/A
structural_annotation	UHGV-0085731_5	PF07761	N/A	N/A	N/A	N/A
PHROG	UHGV-0085731_6	phrog_1194	82.4	4.7e-24	N/A	unknown function
eggNOG-mapper	UHGV-0085731_6	33035.JPJF01000093_gene2242	155.0	0	N/A	N/A
structural_annotation	UHGV-0085731_6	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0085731_7	phrog_1535	278.6	0	tail length tape measure protein	tail
UniRef90	UHGV-0085731_7	UniRef90_R6TDK7	342.0	0	Phage-related protein-like protein	N/A
eggNOG-mapper	UHGV-0085731_7	33035.JPJF01000093_gene2243	335.0	0	phage tail tape measure protein	N/A
COG	UHGV-0085731_7	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-0085731_7	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0085731_8	phrog_8355	60.0	2.8e-17	N/A	unknown function
UniRef90	UHGV-0085731_8	UniRef90_UPI0006BBA9AA	68.6	0.000000000000333	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-0085731_8	1151292.QEW_2424	71.6	7.6e-16	N/A	N/A
PHROG	UHGV-0085731_9	phrog_8300	66.3	4.7e-19	N/A	unknown function
eggNOG-mapper	UHGV-0085731_9	1151292.QEW_2425	59.3	0.000000000613	N/A	N/A
structural_annotation	UHGV-0085731_9	PF06896	N/A	N/A	N/A	N/A
PHROG	UHGV-0085731_10	phrog_820	111.2	7e-33	major tail protein	tail
UniRef90	UHGV-0085731_10	UniRef90_T3DDR1	181.0	0	Phage major tail 2 family protein	N/A
eggNOG-mapper	UHGV-0085731_10	1151292.QEW_2426	181.0	0	N/A	N/A
structural_annotation	UHGV-0085731_10	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0085731_11	phrog_2595	89.3	3.8e-26	head-tail connector protein	connector
UniRef90	UHGV-0085731_11	UniRef90_UPI001D068DAC	139.0	4.34e-40	minor capsid protein	N/A
eggNOG-mapper	UHGV-0085731_11	742740.HMPREF9474_03510	136.0	1.69e-39	N/A	N/A
Pfam	UHGV-0085731_11	PF12691	N/A	N/A	Bacteriophage minor capsid protein	Minor_capsid_3
structural_annotation	UHGV-0085731_11	PF12691,COG5003	N/A	N/A	N/A	N/A
PHROG	UHGV-0085731_12	phrog_556	59.8	3.9e-17	minor head protein	head and packaging
eggNOG-mapper	UHGV-0085731_12	742740.HMPREF9474_03509	142.0	6.16992e-42	N/A	N/A
structural_annotation	UHGV-0085731_12	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0085731_13	phrog_8710	126.3	1.1e-37	N/A	unknown function
eggNOG-mapper	UHGV-0085731_13	742740.HMPREF9474_03508	125.0	1e-35	N/A	N/A
structural_annotation	UHGV-0085731_13	PF10665,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0085731_14	phrog_541	66.9	3.1e-19	head-tail adaptor	connector
eggNOG-mapper	UHGV-0085731_14	1304866.K413DRAFT_0783	146.0	7.84727e-44	N/A	N/A
PHROG	UHGV-0085731_15	phrog_1378	74.2	1.3e-21	N/A	unknown function
eggNOG-mapper	UHGV-0085731_15	742740.HMPREF9474_03506	69.7	0.0000000000000373	N/A	N/A
PHROG	UHGV-0085731_16	phrog_422	357.7	0	major head protein	head and packaging
UniRef90	UHGV-0085731_16	UniRef90_A0A356C4N2	555.0	0	Capsid protein	N/A
eggNOG-mapper	UHGV-0085731_16	742740.HMPREF9474_03505	467.0	0	N/A	N/A
structural_annotation	UHGV-0085731_16	PF19821,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0085731_17	phrog_2303	140.1	1.49995e-41	head scaffolding protein	head and packaging
eggNOG-mapper	UHGV-0085731_17	742740.HMPREF9474_03504	139.0	5.48e-38	N/A	N/A
PHROG	UHGV-0085731_18	phrog_872	81.8	9.8e-24	N/A	unknown function
eggNOG-mapper	UHGV-0085731_18	397290.C810_05225	124.0	3.88e-35	N/A	N/A
dbAPIS	UHGV-0085731_18	APIS052	N/A	N/A	N/A	N/A
PHROG	UHGV-0085731_20	phrog_581	247.0	0	minor head protein	head and packaging
UniRef90	UHGV-0085731_20	UniRef90_A0A413YU28	659.0	0	Minor capsid protein	N/A
eggNOG-mapper	UHGV-0085731_20	33035.JPJF01000093_gene2255	436.0	0	N/A	N/A
Pfam	UHGV-0085731_20	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0085731_20	COG5585	N/A	N/A	Putative phage head morphogenesis protein, F of phage Mu or gp7 of SPP1	N/A
structural_annotation	UHGV-0085731_20	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-0085731_21	phrog_533	275.6	0	portal protein	head and packaging
UniRef90	UHGV-0085731_21	UniRef90_A0A3D5LTG9	942.0	0	Capsid protein	N/A
eggNOG-mapper	UHGV-0085731_21	33035.JPJF01000093_gene2257	567.0	0	N/A	N/A
structural_annotation	UHGV-0085731_21	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0085731_22	K06909	96.3	4.1e-28	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0085731_22	phrog_2	70.4	3.9e-20	terminase large subunit	head and packaging
UniRef90	UHGV-0085731_22	UniRef90_A0A413YU24	917.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0085731_22	1391647.AVSV01000003_gene1802	518.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-0085731_22	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-0085731_22	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0085731_22	PF03237,PF17289,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
KOfam	UHGV-0085731_23	K07474	149.8	2.8026e-44	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-0085731_23	phrog_51	155.5	0	terminase small subunit	head and packaging
UniRef90	UHGV-0085731_23	UniRef90_A0A413YU49	343.0	0	Terminase small subunit	N/A
eggNOG-mapper	UHGV-0085731_23	1499683.CCFF01000014_gene3916	152.0	3.08286e-44	Terminase small subunit	N/A
Pfam	UHGV-0085731_23	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-0085731_23	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0085731_23	PF03592,COG3728	N/A	N/A	N/A	N/A
KOfam	UHGV-0085731_26	K03496	151.4	8.40779e-45	parA, soj; chromosome partitioning protein	N/A
PHROG	UHGV-0085731_26	phrog_164	139.7	2.20004e-41	ParA-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0085731_26	UniRef90_A0A3D5LR82	559.0	0	ParA family protein	N/A
eggNOG-mapper	UHGV-0085731_26	1410653.JHVC01000015_gene715	292.0	0	Anion-transporting ATPase	N/A
Pfam	UHGV-0085731_26	PF13614	N/A	N/A	AAA domain	AAA_31
COG	UHGV-0085731_26	COG1192	N/A	N/A	ParA-like ATPase involved in chromosome/plasmid partitioning or cellulose biosynthesis protein BcsQ	N/A
structural_annotation	UHGV-0085731_26	PF01656,MF_00355,NF041283,COG1192	N/A	N/A	N/A	N/A
PHROG	UHGV-0085731_27	phrog_36	63.8	3.3e-18	transcriptional regulator	transcription regulation
eggNOG-mapper	UHGV-0085731_27	397290.C810_01391	100.0	3.87e-25	N/A	N/A
structural_annotation	UHGV-0085731_27	PF02996	N/A	N/A	N/A	N/A
KOfam	UHGV-0085731_28	K00558	139.0	2.79993e-41	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-0085731_28	phrog_29443	217.0	0	N/A	unknown function
UniRef90	UHGV-0085731_28	UniRef90_UPI001C2DC3AD	278.0	0	DNA cytosine methyltransferase	N/A
eggNOG-mapper	UHGV-0085731_28	1235800.C819_02255	302.0	0	C-5 cytosine-specific DNA methylase	N/A
PADLOC	UHGV-0085731_28	MTase_II_00020	78.5	1.5e-22	Type II methyltransferase	RM
Pfam	UHGV-0085731_28	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
COG	UHGV-0085731_28	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
KOfam	UHGV-0085731_29	K07319	91.2	6.1e-27	yhdJ; adenine-specific DNA-methyltransferase [EC:2.1.1.72]	N/A
PHROG	UHGV-0085731_29	phrog_16	225.5	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0085731_29	UniRef90_A0A356C6C6	1494.0	0	DNA methylase N-4	N/A
eggNOG-mapper	UHGV-0085731_29	1298920.KI911353_gene2709	1393.0	0	DEAD-like helicases superfamily	N/A
Pfam	UHGV-0085731_29	PF00176	N/A	N/A	SNF2-related domain	SNF2-rel_dom
Pfam	UHGV-0085731_29	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-0085731_29	COG0553	N/A	N/A	Superfamily II DNA or RNA helicase, SNF2 family	N/A
structural_annotation	UHGV-0085731_29	PF01555,PF16203,PF04851,MF_01821,MF_00472,NF041790,NF008572,COG0553,COG0863	N/A	N/A	N/A	N/A