UHGV-0086202 (vOTU-114892)

Viral Genome: UHGV-0086202

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0086202
vOTU ID	vOTU-114892
Representative Genome?	Yes
Source	GPD
Original genome ID	uvig_176576
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	80.74 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	24
CheckV host markers	1
Recoded stop codon	No

Viral Content
geNomad score	0.9822
Virus hallmark genes (geNomad)	10
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	77.34
Jumbo phage	No

Genome content
Genome length (bp)	32,723
GC content	42.23%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	46
CDS density	94%
Average CDS length (bps)	667.04
Total tRNA genes	1
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 80.74)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0086202_1	K07486	153.1	2.8026e-45	K07486; transposase	N/A
PHROG	UHGV-0086202_1	phrog_2199	254.2	0	transposase	integration and excision
UniRef90	UHGV-0086202_1	UniRef90_A0A6N9QF67	681.0	0	IS110 family transposase	N/A
eggNOG-mapper	UHGV-0086202_1	1226325.HMPREF1548_05267	670.0	0	PFAM transposase IS116 IS110 IS902 family	N/A
Pfam	UHGV-0086202_1	PF01548	N/A	N/A	Transposase	DEDD_Tnp_IS110
Pfam	UHGV-0086202_1	PF02371	N/A	N/A	Transposase IS116/IS110/IS902 family	Transposase_20
NCBIFam	UHGV-0086202_1	NF033542.1	N/A	N/A	IS110 family transposase	N/A
COG	UHGV-0086202_1	COG3547	N/A	N/A	Transposase	N/A
structural_annotation	UHGV-0086202_1	PF01548,PF02371,MF_00651,NF033542,COG3547	N/A	N/A	N/A	N/A
PHROG	UHGV-0086202_2	phrog_674	179.3	0	N/A	unknown function
UniRef90	UHGV-0086202_2	UniRef90_UPI000462FA44	444.0	0	N/A	N/A
eggNOG-mapper	UHGV-0086202_2	1095750.HMPREF9970_1676	144.0	1.63e-38	N/A	N/A
Pfam	UHGV-0086202_2	PF07083	N/A	N/A	N/A	DUF1351
structural_annotation	UHGV-0086202_2	PF07083	N/A	N/A	N/A	N/A
KOfam	UHGV-0086202_3	K07455	206.3	0	recT; recombination protein RecT	N/A
PHROG	UHGV-0086202_3	phrog_148	224.8	0	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0086202_3	UniRef90_A0A2N5PKF9	540.0	0	Recombinase	N/A
eggNOG-mapper	UHGV-0086202_3	1095750.HMPREF9970_1675	380.0	0	RecT family	N/A
Pfam	UHGV-0086202_3	PF03837	N/A	N/A	RecT family	RecT
NCBIFam	UHGV-0086202_3	TIGR00616.1	N/A	N/A	recombinase, phage RecT family	N/A
COG	UHGV-0086202_3	COG3723	N/A	N/A	Recombinational DNA repair protein RecT	N/A
structural_annotation	UHGV-0086202_3	PF03837,TIGR00616,COG3723	N/A	N/A	N/A	N/A
KOfam	UHGV-0086202_4	K03111	115.5	8e-34	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0086202_4	phrog_44	113.6	2.2e-33	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0086202_4	UniRef90_A0A2N5PKE3	286.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0086202_4	626523.GCWU000342_01558	134.0	1.66e-38	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-0086202_4	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0086202_4	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0086202_4	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0086202_4	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0086202_4	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0086202_5	phrog_244	84.3	1.8e-24	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0086202_5	887929.HMP0721_1279	127.0	2.65e-36	N/A	N/A
structural_annotation	UHGV-0086202_5	PF01870,MF_01490,COG1591	N/A	N/A	N/A	N/A
PHROG	UHGV-0086202_6	phrog_10469	199.6	0	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0086202_6	UniRef90_A0A2N5PKG2	541.0	0	Phage_rep_org_N domain-containing protein	N/A
eggNOG-mapper	UHGV-0086202_6	1291050.JAGE01000002_gene3381	171.0	0	Phage replisome organizer, N-terminal domain protein	N/A
Pfam	UHGV-0086202_6	PF09681	N/A	N/A	N-terminal phage replisome organiser (Phage_rep_org_N)	Phage_rep_org_N
NCBIFam	UHGV-0086202_6	TIGR01714.1	N/A	N/A	phage replisome organizer, putative, N-terminal region	N/A
structural_annotation	UHGV-0086202_6	PF09681,TIGR01714	N/A	N/A	N/A	N/A
PHROG	UHGV-0086202_7	phrog_2600	123.0	3.1e-36	N/A	unknown function
eggNOG-mapper	UHGV-0086202_7	1178540.BA70_18565	187.0	0	N/A	N/A
PHROG	UHGV-0086202_8	phrog_25488	187.4	0	N/A	unknown function
structural_annotation	UHGV-0086202_8	PF12844,PF01316,MF_00535,TIGR00270,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0086202_10	phrog_17690	162.2	0	N/A	unknown function
UniRef90	UHGV-0086202_10	UniRef90_A0A6L5XWF4	113.0	5.57e-30	3-dehydroquinate synthase	N/A
eggNOG-mapper	UHGV-0086202_10	665950.HMPREF1025_02546	166.0	0	N/A	N/A
UniRef90	UHGV-0086202_15	UniRef90_UPI001D04EA1D	256.0	0	N/A	N/A
Pfam	UHGV-0086202_15	PF04448	N/A	N/A	N/A	DUF551
structural_annotation	UHGV-0086202_15	PF04448	N/A	N/A	N/A	N/A
PHROG	UHGV-0086202_16	phrog_374	48.6	0.00000000000019	HNH endonuclease	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0086202_16	86416.Clopa_4295	49.7	0.00000124	N/A	N/A
structural_annotation	UHGV-0086202_18	PF02895	N/A	N/A	N/A	N/A
UniRef90	UHGV-0086202_19	UniRef90_A0A395V1U8	87.8	1.68e-21	Restriction alleviation protein, Lar family	N/A
Pfam	UHGV-0086202_19	PF14354	N/A	N/A	Restriction alleviation protein Lar	Lar_restr_allev
NCBIFam	UHGV-0086202_19	TIGR03655.1	N/A	N/A	Lar family restriction alleviation protein	N/A
structural_annotation	UHGV-0086202_19	PF14354,TIGR03655	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0086202_21	411470.RUMGNA_02203	276.0	0	N/A	N/A
PHROG	UHGV-0086202_23	phrog_36	50.9	0.000000000000032	transcriptional regulator	transcription regulation
UniRef90	UHGV-0086202_23	UniRef90_A0A7X4ZQ48	134.0	7.49e-38	RNA polymerase subunit sigma-70	N/A
eggNOG-mapper	UHGV-0086202_23	1235792.C808_05360	124.0	7.79e-35	N/A	N/A
structural_annotation	UHGV-0086202_23	PF02996	N/A	N/A	N/A	N/A
KOfam	UHGV-0086202_25	K07474	132.4	6.2e-39	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-0086202_25	phrog_51	151.9	2.8026e-45	terminase small subunit	head and packaging
UniRef90	UHGV-0086202_25	UniRef90_A0A2N5PB18	347.0	0	Terminase small subunit	N/A
eggNOG-mapper	UHGV-0086202_25	1235792.C808_05330	182.0	0	Terminase small subunit	N/A
Pfam	UHGV-0086202_25	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-0086202_25	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0086202_25	PF03592,COG3728	N/A	N/A	N/A	N/A
KOfam	UHGV-0086202_26	K06909	288.3	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0086202_26	phrog_3717	273.8	0	terminase large subunit	head and packaging
UniRef90	UHGV-0086202_26	UniRef90_A0A2N5P5F6	869.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0086202_26	1430331.EP10_10340	595.0	0	Phage terminase, large subunit	N/A
Pfam	UHGV-0086202_26	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-0086202_26	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-0086202_26	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0086202_26	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0086202_26	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0086202_27	phrog_64	370.2	0	portal protein	head and packaging
UniRef90	UHGV-0086202_27	UniRef90_A0A2N5PAZ2	843.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0086202_27	1235796.C815_00925	546.0	0	Phage portal protein, SPP1 family	N/A
Pfam	UHGV-0086202_27	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
NCBIFam	UHGV-0086202_27	TIGR01538.1	N/A	N/A	phage portal protein	N/A
structural_annotation	UHGV-0086202_27	PF05133,MF_04120,TIGR01538,COG5518	N/A	N/A	N/A	N/A
PHROG	UHGV-0086202_28	phrog_115	356.4	0	minor head protein	head and packaging
UniRef90	UHGV-0086202_28	UniRef90_A0A2N5P5J9	794.0	0	Phage_Mu_F domain-containing protein	N/A
eggNOG-mapper	UHGV-0086202_28	1232453.BAIF02000011_gene3354	450.0	0	head morphogenesis protein, SPP1 gp7 family	N/A
Pfam	UHGV-0086202_28	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
NCBIFam	UHGV-0086202_28	TIGR01641.1	N/A	N/A	minor capsid protein	N/A
COG	UHGV-0086202_28	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0086202_28	PF04233,PF15529,TIGR01641,COG2369	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0086202_29	1304866.K413DRAFT_0808	112.0	1.56e-31	N/A	N/A
structural_annotation	UHGV-0086202_29	PF10827	N/A	N/A	N/A	N/A
PHROG	UHGV-0086202_30	phrog_1233	61.6	1.5e-17	N/A	unknown function
UniRef90	UHGV-0086202_30	UniRef90_A0A855HLY8	204.0	0	Peptidase_M78 domain-containing protein	N/A
eggNOG-mapper	UHGV-0086202_30	476272.RUMHYD_02850	128.0	2.7e-37	N/A	N/A
Pfam	UHGV-0086202_30	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
structural_annotation	UHGV-0086202_30	PF06114	N/A	N/A	N/A	N/A
KOfam	UHGV-0086202_31	K07584	82.6	6.2e-24	N/A	N/A
PHROG	UHGV-0086202_31	phrog_4478	101.2	5.7e-30	peptidase	other
UniRef90	UHGV-0086202_31	UniRef90_A0A415S8E3	184.0	0	Ribosomal-processing cysteine protease Prp	N/A
eggNOG-mapper	UHGV-0086202_31	411470.RUMGNA_03236	157.0	0	Cysteine protease Prp	N/A
Pfam	UHGV-0086202_31	PF04327	N/A	N/A	Cysteine protease Prp	Peptidase_Prp
COG	UHGV-0086202_31	COG2868	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0086202_31	PF04327,NF011124,COG2868	N/A	N/A	N/A	N/A
PHROG	UHGV-0086202_32	phrog_172	131.4	8.3e-39	head scaffolding protein	head and packaging
UniRef90	UHGV-0086202_32	UniRef90_A0A3A5TW83	142.0	6.26e-39	N/A	N/A
eggNOG-mapper	UHGV-0086202_32	272558.10176153	88.2	8.94e-19	N/A	N/A
Pfam	UHGV-0086202_32	PF14265	N/A	N/A	N/A	DUF4355
structural_annotation	UHGV-0086202_32	PF14265	N/A	N/A	N/A	N/A
PHROG	UHGV-0086202_33	phrog_840	410.1	0	major head protein	head and packaging
UniRef90	UHGV-0086202_33	UniRef90_A0A2N5P5Q7	571.0	0	Phage capsid protein	N/A
eggNOG-mapper	UHGV-0086202_33	294382.Q5YA70_9CAUD	392.0	0	N/A	N/A
structural_annotation	UHGV-0086202_33	PF03864,MF_04119,TIGR04387,COG1659	N/A	N/A	N/A	N/A
KOfam	UHGV-0086202_34	K24213	48.4	0.00000000000012	C1QTNF9; complement C1q and tumor necrosis factor-related protein 9	N/A
PHROG	UHGV-0086202_34	phrog_366	55.4	0.0000000000000012	tail fiber protein	tail
UniRef90	UHGV-0086202_34	UniRef90_UPI001D05A857	141.0	4.55002e-41	head fiber protein	N/A
eggNOG-mapper	UHGV-0086202_34	1203606.HMPREF1526_01905	69.7	0.000000000000202	Collagen triple helix repeat (20 copies)	N/A
Pfam	UHGV-0086202_34	PF11133	N/A	N/A	Head fiber protein	Phage_head_fibr
COG	UHGV-0086202_34	COG3266	N/A	N/A	Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain	N/A
PHROG	UHGV-0086202_35	phrog_132	87.7	1e-25	head-tail adaptor	connector
UniRef90	UHGV-0086202_35	UniRef90_A0A174PRY0	130.0	4.77e-37	Phage gp6-like head-tail connector protein	N/A
eggNOG-mapper	UHGV-0086202_35	476272.RUMHYD_02856	126.0	2.66e-36	Phage gp6-like head-tail connector protein	N/A
Pfam	UHGV-0086202_35	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
structural_annotation	UHGV-0086202_35	PF05135	N/A	N/A	N/A	N/A
PHROG	UHGV-0086202_36	phrog_348	61.5	1.7e-17	minor head protein	head and packaging
eggNOG-mapper	UHGV-0086202_36	476272.RUMHYD_02857	117.0	8.08e-33	N/A	N/A
structural_annotation	UHGV-0086202_36	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0086202_37	phrog_5	77.8	2.1e-22	tail completion or Neck1 protein	connector
UniRef90	UHGV-0086202_37	UniRef90_UPI001D03F1E5	135.0	4.34e-39	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0086202_37	476272.RUMHYD_02858	127.0	1.14e-36	Bacteriophage HK97-gp10, putative tail-component	N/A
Pfam	UHGV-0086202_37	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
NCBIFam	UHGV-0086202_37	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
structural_annotation	UHGV-0086202_37	PF05069,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-0086202_38	phrog_176	95.3	5.5e-28	tail terminator	connector
UniRef90	UHGV-0086202_38	UniRef90_UPI001E62787A	218.0	0	N/A	N/A
eggNOG-mapper	UHGV-0086202_38	476272.RUMHYD_02859	207.0	0	N/A	N/A
structural_annotation	UHGV-0086202_38	PF11367	N/A	N/A	N/A	N/A
PHROG	UHGV-0086202_39	phrog_238	173.2	0	major tail protein	tail
UniRef90	UHGV-0086202_39	UniRef90_A0A2N5PI04	326.0	0	Phage major tail protein, TP901-1 family	N/A
eggNOG-mapper	UHGV-0086202_39	1235798.C817_03471	237.0	0	Phage tail tube protein	N/A
Pfam	UHGV-0086202_39	PF06199	N/A	N/A	Phage tail tube protein	Phage_tail_2
NCBIFam	UHGV-0086202_39	TIGR02126.1	N/A	N/A	phage major tail protein, TP901-1 family	N/A
structural_annotation	UHGV-0086202_39	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0086202_40	phrog_183	87.0	2.4e-25	tail chaperone protein	tail
UniRef90	UHGV-0086202_40	UniRef90_UPI001E3CACFF	158.0	0	tail assembly chaperone	N/A
eggNOG-mapper	UHGV-0086202_40	476272.RUMHYD_02861	158.0	0	Phage tail assembly chaperone protein, TAC	N/A
Pfam	UHGV-0086202_40	PF12363	N/A	N/A	Phage tail assembly chaperone protein, TAC	Phage_TAC_12
structural_annotation	UHGV-0086202_40	PF12363	N/A	N/A	N/A	N/A
PHROG	UHGV-0086202_41	phrog_441	91.6	9.5e-27	tail assembly chaperone	tail
UniRef90	UHGV-0086202_41	UniRef90_A0A0K9N8J7	90.9	1.47e-21	N/A	N/A
eggNOG-mapper	UHGV-0086202_41	1232453.BAIF02000011_gene3366	113.0	2.41e-31	N/A	N/A
PHROG	UHGV-0086202_42	phrog_1204	348.0	0	tail protein	tail
UniRef90	UHGV-0086202_42	UniRef90_A0A2N5P5J5	1063.0	0	TMP_3 domain-containing protein	N/A
eggNOG-mapper	UHGV-0086202_42	673832.D2IYX6_9CAUD	299.0	0	transmembrane transport	N/A
Pfam	UHGV-0086202_42	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-0086202_42	TIGR02675.1	N/A	N/A	tape measure protein	N/A
structural_annotation	UHGV-0086202_42	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0086202_43	phrog_202	318.9	0	distal tail protein Dit	tail
UniRef90	UHGV-0086202_43	UniRef90_A0A415S8D0	933.0	0	Phage tail family protein	N/A
eggNOG-mapper	UHGV-0086202_43	411470.RUMGNA_02229	675.0	0	N/A	N/A
Pfam	UHGV-0086202_43	PF05709	N/A	N/A	Phage tail protein RIFT-related domain	Sipho_tail
NCBIFam	UHGV-0086202_43	TIGR01633.1	N/A	N/A	distal tail protein Dit	N/A
COG	UHGV-0086202_43	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0086202_43	PF05709,PF21708,TIGR01633,NF041449,COG4722,COG3506	N/A	N/A	N/A	N/A
KOfam	UHGV-0086202_44	K16617	55.9	5.8e-21	COL13A; collagen type XIII alpha	N/A
PHROG	UHGV-0086202_44	phrog_588	584.6	0	tail fiber protein and host specificity	tail
UniRef90	UHGV-0086202_44	UniRef90_UPI00156EB2FA	2006.0	0	collagen-like protein	N/A
eggNOG-mapper	UHGV-0086202_44	411470.RUMGNA_02230	894.0	0	N/A	N/A
Pfam	UHGV-0086202_44	PF21470	N/A	N/A	Minor structural protein 5-like, C-terminal domain	BppU-like_C
Pfam	UHGV-0086202_44	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
structural_annotation	UHGV-0086202_44	PF14594,PF08931,PF13895,TIGR01665,TIGR04488,COG4926	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0086202_45	608534.GCWU000341_02271	59.3	0.000000000341	N/A	N/A
PHROG	UHGV-0086202_46	phrog_10091	102.6	3.3e-30	holin	lysis
UniRef90	UHGV-0086202_46	UniRef90_A0A2N5P008	151.0	0	Phage holin	N/A
eggNOG-mapper	UHGV-0086202_46	428127.EUBDOL_01206	123.0	9.98e-36	COG5546 Small integral membrane protein	N/A
Pfam	UHGV-0086202_46	PF04531	N/A	N/A	Bacteriophage holin	Phage_holin_1
NCBIFam	UHGV-0086202_46	TIGR01598.1	N/A	N/A	phage holin	N/A
COG	UHGV-0086202_46	COG5546	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0086202_46	COG5546	N/A	N/A	N/A	N/A