UHGV-0086251 (vOTU-099536)

Viral Genome: UHGV-0086251

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0086251
vOTU ID	vOTU-099536
Representative Genome?	Yes
Source	GPD
Original genome ID	uvig_199689
Associated BioSample	SAMEA3449423
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	62.95 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	14
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9831
Virus hallmark genes (geNomad)	5
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	27.87
Jumbo phage	No

Genome content
Genome length (bp)	26,179
GC content	52.53%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	44
CDS density	95%
Average CDS length (bps)	563.05
Total tRNA genes	1
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 62.95)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0086251_1	phrog_38044	57.3	6.5e-17	N/A	unknown function
eggNOG-mapper	UHGV-0086251_1	762982.HMPREF9442_01191	79.0	0.000000000000491	cellulase activity	N/A
COG	UHGV-0086251_1	COG4733	N/A	N/A	Phage-related protein, tail protein J	N/A
UniRef90	UHGV-0086251_3	UniRef90_A0A8D9PDX6	126.0	5.39e-36	Zinc-finger double domain protein	N/A
structural_annotation	UHGV-0086251_3	PF07238	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0086251_4	1235797.C816_04179	87.0	0.00000000000000106	Chaperone of endosialidase	N/A
structural_annotation	UHGV-0086251_4	NF041249,COG4379	N/A	N/A	N/A	N/A
PHROG	UHGV-0086251_5	phrog_22212	42.7	0.000000000002	N/A	unknown function
eggNOG-mapper	UHGV-0086251_5	1235797.C816_04180	100.0	1.18e-22	N/A	N/A
structural_annotation	UHGV-0086251_5	PF21683,TIGR02126,COG4379	N/A	N/A	N/A	N/A
PHROG	UHGV-0086251_6	phrog_1194	51.9	0.000000000000014	N/A	unknown function
eggNOG-mapper	UHGV-0086251_6	60520.HR47_13415	51.2	0.0000017	N/A	N/A
structural_annotation	UHGV-0086251_6	PF20458,TIGR02126,COG5437	N/A	N/A	N/A	N/A
KOfam	UHGV-0086251_7	K03529	43.0	0.0000000000022	smc; chromosome segregation protein	N/A
PHROG	UHGV-0086251_7	phrog_1535	120.6	0	tail length tape measure protein	tail
UniRef90	UHGV-0086251_7	UniRef90_A0A810PX76	290.0	0	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-0086251_7	1235797.C816_04182	286.0	0	SLT domain	N/A
COG	UHGV-0086251_7	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0086251_7	PF16789,TIGR02473	N/A	N/A	N/A	N/A
PHROG	UHGV-0086251_8	phrog_806	88.2	1e-25	N/A	unknown function
UniRef90	UHGV-0086251_8	UniRef90_A0A212ITM5	218.0	0	Telomeric repeat-binding factor 2	N/A
eggNOG-mapper	UHGV-0086251_8	476272.RUMHYD_01730	160.0	0	N/A	N/A
Pfam	UHGV-0086251_8	PF13240	N/A	N/A	zinc-ribbon domain	zinc_ribbon_2
Pfam	UHGV-0086251_8	PF11611	N/A	N/A	N/A	DUF4352
structural_annotation	UHGV-0086251_8	PF11611,MF_00791,NF003967,COG2967	N/A	N/A	N/A	N/A
PHROG	UHGV-0086251_9	phrog_706	117.8	9.3e-35	N/A	unknown function
UniRef90	UHGV-0086251_9	UniRef90_UPI000682A80B	225.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-0086251_9	693746.OBV_18170	217.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0086251_9	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0086251_9	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0086251_10	phrog_11299	70.8	2.4e-20	N/A	unknown function
eggNOG-mapper	UHGV-0086251_10	693746.OBV_18160	144.0	2.18042e-42	N/A	N/A
structural_annotation	UHGV-0086251_10	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-0086251_11	phrog_3099	90.3	2.6e-26	N/A	unknown function
eggNOG-mapper	UHGV-0086251_11	1226322.HMPREF1545_00056	244.0	0	N/A	N/A
structural_annotation	UHGV-0086251_11	TIGR02126	N/A	N/A	N/A	N/A
PHROG	UHGV-0086251_12	phrog_3266	62.0	9.8e-18	tail completion	connector
UniRef90	UHGV-0086251_12	UniRef90_A0A2Z4QA01	123.0	8.73e-34	Minor capsid protein	N/A
eggNOG-mapper	UHGV-0086251_12	1232443.BAIA02000078_gene24	182.0	0	N/A	N/A
structural_annotation	UHGV-0086251_12	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0086251_13	phrog_556	77.2	2e-22	minor head protein	head and packaging
UniRef90	UHGV-0086251_13	UniRef90_UPI00195E1497	186.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0086251_13	1226322.HMPREF1545_00054	155.0	0	Minor capsid protein	N/A
Pfam	UHGV-0086251_13	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0086251_13	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0086251_14	phrog_3366	91.4	9.5e-27	N/A	unknown function
eggNOG-mapper	UHGV-0086251_14	1226322.HMPREF1545_00053	149.0	3.78351e-44	N/A	N/A
structural_annotation	UHGV-0086251_14	PF20536,TIGR01563	N/A	N/A	N/A	N/A
PHROG	UHGV-0086251_15	phrog_541	108.7	3.6e-32	head-tail adaptor	connector
eggNOG-mapper	UHGV-0086251_15	642492.Clole_0822	61.2	0.000000000484	N/A	N/A
PHROG	UHGV-0086251_16	phrog_544	188.5	0	major head protein	head and packaging
UniRef90	UHGV-0086251_16	UniRef90_A0A810PZM2	502.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0086251_16	1347392.CCEZ01000005_gene1236	291.0	0	N/A	N/A
structural_annotation	UHGV-0086251_16	PF03864,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0086251_17	PF06810	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0086251_18	PF18152	N/A	N/A	N/A	N/A
PHROG	UHGV-0086251_20	phrog_581	296.1	0	minor head protein	head and packaging
UniRef90	UHGV-0086251_20	UniRef90_A0A1C5N7V1	543.0	0	Phage minor capsid protein 2	N/A
eggNOG-mapper	UHGV-0086251_20	1226322.HMPREF1545_00046	387.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-0086251_20	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0086251_20	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0086251_20	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-0086251_21	phrog_533	380.5	0	portal protein	head and packaging
UniRef90	UHGV-0086251_21	UniRef90_A0A1C5N775	583.0	0	Phage portal protein, putative, A118 family	N/A
eggNOG-mapper	UHGV-0086251_21	1226322.HMPREF1545_00044	549.0	0	N/A	N/A
Pfam	UHGV-0086251_21	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0086251_21	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0086251_22	K06909	111.4	1.1e-32	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0086251_22	phrog_2	117.8	1.6e-34	terminase large subunit	head and packaging
UniRef90	UHGV-0086251_22	UniRef90_A0A3D3Y0N9	424.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0086251_22	1226322.HMPREF1545_00043	393.0	0	Phage terminase large subunit	N/A
Pfam	UHGV-0086251_22	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
NCBIFam	UHGV-0086251_22	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0086251_22	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0086251_22	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
KOfam	UHGV-0086251_24	K07319	119.4	3.4e-35	yhdJ; adenine-specific DNA-methyltransferase [EC:2.1.1.72]	N/A
PHROG	UHGV-0086251_24	phrog_498	432.5	0	DNA methyltransferase	other
UniRef90	UHGV-0086251_24	UniRef90_A0A810Q3Z7	446.0	0	N6_N4_Mtase domain-containing protein	N/A
eggNOG-mapper	UHGV-0086251_24	1423758.BN55_01455	415.0	0	DNA methylase	N/A
PADLOC	UHGV-0086251_24	MTase_II_00015	239.1	0	Type II methyltransferase	RM
Pfam	UHGV-0086251_24	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
Pfam	UHGV-0086251_24	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-0086251_24	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-0086251_24	PF01555,PF02195,MF_02015,MF_01872,NF010253,TIGR04285,COG0863,COG1475	N/A	N/A	N/A	N/A
KOfam	UHGV-0086251_25	K22299	48.1	0.0000000000003	rghR; HTH-type transcriptional regulator, competence development regulator	N/A
PHROG	UHGV-0086251_25	phrog_8	67.1	4e-19	transcriptional regulator	transcription regulation
UniRef90	UHGV-0086251_25	UniRef90_A0A8D9PDC4	154.0	0	Repressor protein	N/A
eggNOG-mapper	UHGV-0086251_25	1226322.HMPREF1545_00039	79.3	1.19e-18	sequence-specific DNA binding	N/A
Pfam	UHGV-0086251_25	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0086251_25	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0086251_25	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
UniRef90	UHGV-0086251_36	UniRef90_A0A8D9PDK1	74.7	0.00000000000000796	Anti-repressor	N/A
PHROG	UHGV-0086251_37	phrog_1384	132.7	2.5e-39	Mom-like DNA modification protein	other
eggNOG-mapper	UHGV-0086251_37	665956.HMPREF1032_03086	274.0	0	COG NOG12663 non supervised orthologous group	N/A
structural_annotation	UHGV-0086251_37	PF11124,MF_02210,NF040502,COG3818	N/A	N/A	N/A	N/A
KOfam	UHGV-0086251_40	K00558	123.5	9.19994e-41	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-0086251_40	phrog_116	150.8	0	DNA methyltransferase	other
UniRef90	UHGV-0086251_40	UniRef90_A0A1C5KYC3	328.0	0	DNA (cytosine-5-)-methyltransferase	N/A
eggNOG-mapper	UHGV-0086251_40	718252.FP2_16350	325.0	0	C-5 cytosine-specific DNA methylase	N/A
PADLOC	UHGV-0086251_40	oMTase_00004	156.8	0	orphan methyltransferase	RM
Pfam	UHGV-0086251_40	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
COG	UHGV-0086251_40	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
KOfam	UHGV-0086251_42	K00571	112.7	4.3e-33	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	N/A
PHROG	UHGV-0086251_42	phrog_67	105.3	9.3e-32	DNA methyltransferase	other
UniRef90	UHGV-0086251_42	UniRef90_A0A1C6E5W1	392.0	0	Methyltransferase	N/A
eggNOG-mapper	UHGV-0086251_42	749222.Nitsa_1817	372.0	0	Belongs to the N(4) N(6)-methyltransferase family	N/A
PADLOC	UHGV-0086251_42	MTase_II_00157	91.4	5.1e-27	Type II methyltransferase	RM
Pfam	UHGV-0086251_42	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-0086251_42	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-0086251_42	PF01555,MF_01872,NF010253,COG0863	N/A	N/A	N/A	N/A
PHROG	UHGV-0086251_44	phrog_190	111.4	7.2e-33	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0086251_44	UniRef90_A0A8D9PDD6	260.0	0	Endonuclease	N/A
eggNOG-mapper	UHGV-0086251_44	1226322.HMPREF1545_00295	119.0	2.76e-32	N/A	N/A
Pfam	UHGV-0086251_44	PF06356	N/A	N/A	N/A	DUF1064
structural_annotation	UHGV-0086251_44	PF06356	N/A	N/A	N/A	N/A