UHGV-0090462 (vOTU-167932)

Viral Genome: UHGV-0090462

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0090462
vOTU ID	vOTU-167932
Representative Genome?	Yes
Source	GPD
Original genome ID	uvig_171665
Associated BioSample	SAMEA3136667
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	67.43 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	15
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9782
Virus hallmark genes (geNomad)	7
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	36.44
Jumbo phage	No

Genome content
Genome length (bp)	31,627
GC content	44.02%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	41
CDS density	87%
Average CDS length (bps)	670.61
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 67.43)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0090462_1	phrog_9958	148.3	2.94273e-44	N/A	unknown function
UniRef90	UHGV-0090462_1	UniRef90_A0A356CXW0	288.0	0	N/A	N/A
eggNOG-mapper	UHGV-0090462_1	1160721.RBI_I01591	286.0	0	N/A	N/A
Pfam	UHGV-0090462_1	PF19789	N/A	N/A	N/A	DUF6273
structural_annotation	UHGV-0090462_1	PF19789	N/A	N/A	N/A	N/A
KOfam	UHGV-0090462_3	K00390	52.2	3.9e-18	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	N/A
PHROG	UHGV-0090462_3	phrog_424	106.7	1.7e-31	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0090462_3	UniRef90_UPI001899D561	526.0	0	phosphoadenosine phosphosulfate reductase family protein	N/A
eggNOG-mapper	UHGV-0090462_3	397291.C804_05723	236.0	0	Phosphoadenosine phosphosulfate reductase family	N/A
Pfam	UHGV-0090462_3	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-0090462_3	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-0090462_3	PF01507,MF_00063,NF010369,COG0175	N/A	N/A	N/A	N/A
PHROG	UHGV-0090462_6	phrog_9958	153.9	0	N/A	unknown function
UniRef90	UHGV-0090462_6	UniRef90_UPI00189DF4B7	382.0	0	N/A	N/A
eggNOG-mapper	UHGV-0090462_6	246199.CUS_4486	197.0	0	N/A	N/A
Pfam	UHGV-0090462_6	PF19789	N/A	N/A	N/A	DUF6273
structural_annotation	UHGV-0090462_6	PF19789	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0090462_7	246199.CUS_5908	84.0	2.77e-17	N/A	N/A
AcrCatalog	UHGV-0090462_7	cluster_136737	57.4	0.00000000000691	NA	N/A
KOfam	UHGV-0090462_8	K02316	113.2	7.8e-34	dnaG; DNA primase [EC:2.7.7.101]	N/A
PHROG	UHGV-0090462_8	phrog_864	262.8	0	DNA primase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0090462_8	UniRef90_A0A374HKH8	1593.0	0	Toprim domain-containing protein	N/A
eggNOG-mapper	UHGV-0090462_8	2754.EH55_09010	183.0	0	Phage plasmid primase P4 family	N/A
PADLOC	UHGV-0090462_8	drt-cluster192	49.4	1.8e-19	DRT	DRT
Pfam	UHGV-0090462_8	PF13155	N/A	N/A	Toprim-like	Toprim_2
Pfam	UHGV-0090462_8	PF08706	N/A	N/A	D5 N terminal like	D5_N
Pfam	UHGV-0090462_8	PF19263	N/A	N/A	N/A	DUF5906
Pfam	UHGV-0090462_8	PF03288	N/A	N/A	Poxvirus D5 protein-like	Pox_D5
NCBIFam	UHGV-0090462_8	TIGR01613.1	N/A	N/A	phage/plasmid primase, P4 family	N/A
COG	UHGV-0090462_8	COG3378	N/A	N/A	DNA primase, phage- or plasmid-associated	N/A
structural_annotation	UHGV-0090462_8	PF04735,MF_00974,MF_04000,NF005477,COG3378,COG0358	N/A	N/A	N/A	N/A
PHROG	UHGV-0090462_9	phrog_606	48.7	0.00000000000011	terminase small subunit	head and packaging
UniRef90	UHGV-0090462_9	UniRef90_UPI001D07B715	119.0	7.28e-31	DNA-packaging protein	N/A
eggNOG-mapper	UHGV-0090462_9	877421.AUJT01000054_gene66	65.1	0.0000000000538	N/A	N/A
Pfam	UHGV-0090462_9	PF16677	N/A	N/A	DNA-packaging protein gp3	GP3_package
UniRef90	UHGV-0090462_14	UniRef90_A0A374HMV1	105.0	5.08e-28	HTH cro/C1-type domain-containing protein	N/A
structural_annotation	UHGV-0090462_14	PF20075,TIGR03070	N/A	N/A	N/A	N/A
KOfam	UHGV-0090462_15	K14060	132.6	3.8e-39	pinR; putative DNA-invertase from lambdoid prophage Rac	N/A
PHROG	UHGV-0090462_15	phrog_125	136.6	1.8e-40	DNA invertase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0090462_15	UniRef90_A0A374HKF2	357.0	0	Recombinase family protein	N/A
eggNOG-mapper	UHGV-0090462_15	931276.Cspa_c57140	193.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-0090462_15	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
COG	UHGV-0090462_15	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0090462_15	PF00239,PF02796,MF_00489,NF009949,COG1961	N/A	N/A	N/A	N/A
PHROG	UHGV-0090462_16	phrog_38	180.7	0	terminase large subunit	head and packaging
UniRef90	UHGV-0090462_16	UniRef90_A0A3D4KYF7	307.0	0	DOD-type homing endonuclease domain-containing protein	N/A
eggNOG-mapper	UHGV-0090462_16	1232453.BAIF02000058_gene1623	277.0	0	TIGRFAM Phage	N/A
NCBIFam	UHGV-0090462_16	TIGR01630.1	N/A	N/A	phage terminase large subunit	N/A
COG	UHGV-0090462_16	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0090462_16	PF17289,PF03237,MF_04147,NF033889,COG5410,COG5362	N/A	N/A	N/A	N/A
PHROG	UHGV-0090462_18	phrog_64	210.1	0	portal protein	head and packaging
UniRef90	UHGV-0090462_18	UniRef90_A0A374HKE8	904.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0090462_18	1121866.AUGK01000003_gene1429	319.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0090462_18	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0090462_18	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0090462_19	phrog_2468	95.5	8.4e-29	head morphogenesis	head and packaging
UniRef90	UHGV-0090462_19	UniRef90_A0A374HKG4	432.0	0	Phage_Mu_F domain-containing protein	N/A
eggNOG-mapper	UHGV-0090462_19	649747.HMPREF0083_01681	82.4	5e-16	phage Mu protein	N/A
Pfam	UHGV-0090462_19	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
COG	UHGV-0090462_19	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0090462_19	PF04233,TIGR01641	N/A	N/A	N/A	N/A
UniRef90	UHGV-0090462_20	UniRef90_A0A7C7EK05	75.5	0.000000000000159	N/A	N/A
eggNOG-mapper	UHGV-0090462_20	1232453.BAIF02000058_gene1626	100.0	7.35e-24	N/A	N/A
structural_annotation	UHGV-0090462_20	PF14265	N/A	N/A	N/A	N/A
PHROG	UHGV-0090462_21	phrog_909	88.3	7.2e-26	major head protein	head and packaging
eggNOG-mapper	UHGV-0090462_21	1536772.R70723_06665	60.8	0.000000000153	N/A	N/A
PHROG	UHGV-0090462_22	phrog_29	196.3	0	major head protein	head and packaging
UniRef90	UHGV-0090462_22	UniRef90_A0A374HKR5	859.0	0	Phage capsid protein	N/A
eggNOG-mapper	UHGV-0090462_22	1232453.BAIF02000058_gene1628	308.0	0	Phage major capsid protein E	N/A
Pfam	UHGV-0090462_22	PF03864	N/A	N/A	Phage major capsid protein E	Phage_cap_E
Pfam	UHGV-0090462_22	PF18316	N/A	N/A	S-layer protein SbsC C-terminal domain	S-l_SbsC_C
structural_annotation	UHGV-0090462_22	PF03864,PF18316,MF_04133,NF041162,COG4653	N/A	N/A	N/A	N/A
UniRef90	UHGV-0090462_23	UniRef90_A0A374HKI7	202.0	0	DNA-packaging protein	N/A
eggNOG-mapper	UHGV-0090462_23	996306.SSUR61_0983	56.2	0.00000000776	N/A	N/A
Pfam	UHGV-0090462_23	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
structural_annotation	UHGV-0090462_23	TIGR01560	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0090462_24	1121866.AUGK01000003_gene1432	62.0	0.000000000165	N/A	N/A
UniRef90	UHGV-0090462_25	UniRef90_UPI001BBD4500	124.0	4.86e-33	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0090462_25	397290.C810_01411	115.0	4.56e-30	N/A	N/A
PHROG	UHGV-0090462_26	phrog_78	42.1	0.000000000015	tail terminator	connector
structural_annotation	UHGV-0090462_26	PF06141,TIGR02367,COG3167	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0090462_27	1294142.CINTURNW_1696	50.8	0.00000501	Phage tail tube protein, TTP	N/A
structural_annotation	UHGV-0090462_27	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
UniRef90	UHGV-0090462_28	UniRef90_A0A374HKD4	226.0	0	N/A	N/A
eggNOG-mapper	UHGV-0090462_28	1123263.AUKY01000015_gene1618	77.4	5.76e-17	N/A	N/A
Pfam	UHGV-0090462_28	PF16478	N/A	N/A	N/A	DUF5055
structural_annotation	UHGV-0090462_28	PF16478	N/A	N/A	N/A	N/A
PHROG	UHGV-0090462_30	phrog_1535	119.7	0	tail length tape measure protein	tail
eggNOG-mapper	UHGV-0090462_30	1121866.AUGK01000003_gene1437	218.0	0	phage tail tape measure protein	N/A
COG	UHGV-0090462_30	COG1280	N/A	N/A	Threonine/homoserine/homoserine lactone efflux protein	N/A
PHROG	UHGV-0090462_31	phrog_1194	83.7	1.8e-24	N/A	unknown function
eggNOG-mapper	UHGV-0090462_31	1160721.RBI_II00527	124.0	3.43e-35	N/A	N/A
structural_annotation	UHGV-0090462_31	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0090462_32	phrog_9680	50.6	0.000000000000001	host range and adsorption protein	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0090462_32	UniRef90_R5LL83	64.3	0.00000012	KID repeat-containing protein	N/A
eggNOG-mapper	UHGV-0090462_32	1160721.RBI_II00526	501.0	0	N/A	N/A
structural_annotation	UHGV-0090462_32	PF14594,NF033848,COG3500	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0090462_34	1410617.JHXH01000006_gene232	83.2	0.0000000000000351	N/A	N/A
structural_annotation	UHGV-0090462_34	PF10651	N/A	N/A	N/A	N/A
PHROG	UHGV-0090462_36	phrog_134	49.2	0.000000000000074	N/A	unknown function
UniRef90	UHGV-0090462_36	UniRef90_A0A5R9MGY3	88.2	3.44e-22	XkdX family protein	N/A
eggNOG-mapper	UHGV-0090462_36	1298920.KI911353_gene4834	62.4	0.000000000000937	Phage uncharacterised protein (Phage_XkdX)	N/A
Pfam	UHGV-0090462_36	PF09693	N/A	N/A	Phage uncharacterised protein (Phage_XkdX)	Phage_XkdX
structural_annotation	UHGV-0090462_36	PF09693,TIGR01669	N/A	N/A	N/A	N/A
UniRef90	UHGV-0090462_37	UniRef90_UPI0009FBEB5A	149.0	6.72623e-44	phage holin family protein	N/A
Pfam	UHGV-0090462_37	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
structural_annotation	UHGV-0090462_37	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
PHROG	UHGV-0090462_38	phrog_8781	137.7	6.50006e-41	endolysin	lysis
UniRef90	UHGV-0090462_38	UniRef90_A0A374HXC4	437.0	0	CHAP domain-containing protein	N/A
eggNOG-mapper	UHGV-0090462_38	1405498.SSIM_04755	95.9	3.66e-20	Ami_2	N/A
Pfam	UHGV-0090462_38	PF05257	N/A	N/A	CHAP domain	CHAP
COG	UHGV-0090462_38	COG1388	N/A	N/A	LysM repeat	N/A
structural_annotation	UHGV-0090462_38	PF06940,TIGR02594,COG3942	N/A	N/A	N/A	N/A
COG	UHGV-0090462_39	COG2944	N/A	N/A	DNA-binding transcriptional regulator YiaG, XRE-type HTH domain	N/A
PHROG	UHGV-0090462_41	phrog_6160	66.6	4.1e-19	N/A	unknown function